RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 TROQ12816 1431 aaPredicted RBP28.72■■■□□ 2.19
CKLF-CMTM1-202ENST00000527845 SCAPERQ9BY12 1400 aa28.71■■■□□ 2.19
CKLF-CMTM1-202ENST00000527845 RIMS1Q86UR5 1692 aaKnown RBP28.7■■■□□ 2.18
CKLF-CMTM1-202ENST00000527845 EFCAB2Q5VUJ9 269 aa28.69■■■□□ 2.18
CKLF-CMTM1-202ENST00000527845 ILDR1Q86SU0 546 aaPredicted RBP28.68■■■□□ 2.18
CKLF-CMTM1-202ENST00000527845 YEATS2Q9ULM3 1422 aa28.68■■■□□ 2.18
CKLF-CMTM1-202ENST00000527845 LRRIQ1Q96JM4 1722 aa28.67■■■□□ 2.18
CKLF-CMTM1-202ENST00000527845 CCDC18Q5T9S5 1454 aa28.66■■■□□ 2.18
CKLF-CMTM1-202ENST00000527845 PCF11O94913 1555 aaKnown RBP28.65■■■□□ 2.18
CKLF-CMTM1-202ENST00000527845 ARHGAP5Q13017 1502 aa28.64■■■□□ 2.17
CKLF-CMTM1-202ENST00000527845 CASKIN1Q8WXD9 1431 aa28.62■■■□□ 2.17
CKLF-CMTM1-202ENST00000527845 ZNF518AQ6AHZ1 1483 aa28.62■■■□□ 2.17
CKLF-CMTM1-202ENST00000527845 SIGLEC1Q9BZZ2 1709 aa28.6■■■□□ 2.17
CKLF-CMTM1-202ENST00000527845 C9orf84Q5VXU9 1444 aa28.6■■■□□ 2.17
CKLF-CMTM1-202ENST00000527845 ATP10AO60312 1499 aa28.59■■■□□ 2.17
CKLF-CMTM1-202ENST00000527845 FER1L4A9Z1Z3 1794 aa28.58■■■□□ 2.17
CKLF-CMTM1-202ENST00000527845 LMTK3Q96Q04 1460 aa28.57■■■□□ 2.16
CKLF-CMTM1-202ENST00000527845 KDM5CP41229 1560 aa28.57■■■□□ 2.16
CKLF-CMTM1-202ENST00000527845 PREX2Q70Z35 1606 aa28.55■■■□□ 2.16
CKLF-CMTM1-202ENST00000527845 FYCO1Q9BQS8 1478 aa28.55■■■□□ 2.16
CKLF-CMTM1-202ENST00000527845 CDC42BPBQ9Y5S2 1711 aa28.55■■■□□ 2.16
CKLF-CMTM1-202ENST00000527845 ARHGEF12Q9NZN5 1544 aa28.51■■■□□ 2.15
CKLF-CMTM1-202ENST00000527845 REREQ9P2R6 1566 aa28.48■■■□□ 2.15
CKLF-CMTM1-202ENST00000527845 ABCC1P33527 1531 aa28.47■■■□□ 2.15
CKLF-CMTM1-202ENST00000527845 MLECQ14165 292 aa28.45■■■□□ 2.14
CKLF-CMTM1-202ENST00000527845 ITSN2Q9NZM3 1697 aa28.45■■■□□ 2.14
CKLF-CMTM1-202ENST00000527845 MLH3Q9UHC1 1453 aa28.44■■■□□ 2.14
CKLF-CMTM1-202ENST00000527845 DIP2CQ9Y2E4 1556 aa28.44■■■□□ 2.14
CKLF-CMTM1-202ENST00000527845 CDC42BPAQ5VT25 1732 aa28.43■■■□□ 2.14
CKLF-CMTM1-202ENST00000527845 AFAP1Q8N556 730 aa28.41■■■□□ 2.14
CKLF-CMTM1-202ENST00000527845 MYT1LQ9UL68 1186 aa28.4■■■□□ 2.14
CKLF-CMTM1-202ENST00000527845 ABCA6Q8N139 1617 aa28.4■■■□□ 2.14
CKLF-CMTM1-202ENST00000527845 PREX1Q8TCU6 1659 aa28.38■■■□□ 2.13
CKLF-CMTM1-202ENST00000527845 PLPPR3Q6T4P5 718 aa28.37■■■□□ 2.13
CKLF-CMTM1-202ENST00000527845 AGLP35573 1532 aa28.35■■■□□ 2.13
CKLF-CMTM1-202ENST00000527845 FBXO41Q8TF61 875 aa28.34■■■□□ 2.13
CKLF-CMTM1-202ENST00000527845 TRAPPC8Q9Y2L5 1435 aa28.34■■■□□ 2.13
CKLF-CMTM1-202ENST00000527845 KIDINS220Q9ULH0 1771 aa28.3■■■□□ 2.12
CKLF-CMTM1-202ENST00000527845 HSPA2P54652 639 aa28.29■■■□□ 2.12
CKLF-CMTM1-202ENST00000527845 SAMD9LQ8IVG5 1584 aa28.28■■■□□ 2.12
CKLF-CMTM1-202ENST00000527845 GPATCH8Q9UKJ3 1502 aaKnown RBP28.27■■■□□ 2.12
CKLF-CMTM1-202ENST00000527845 PLEKHH2Q8IVE3 1493 aa28.27■■■□□ 2.12
CKLF-CMTM1-202ENST00000527845 SYCP2Q9BX26 1530 aa28.25■■■□□ 2.11
CKLF-CMTM1-202ENST00000527845 SETD1BQ9UPS6 1966 aaKnown RBP28.25■■■□□ 2.11
CKLF-CMTM1-202ENST00000527845 ESF1Q9H501 851 aaKnown RBP28.23■■■□□ 2.11
CKLF-CMTM1-202ENST00000527845 UHRF1BP1Q6BDS2 1440 aa28.23■■■□□ 2.11
CKLF-CMTM1-202ENST00000527845 KIAA1107Q9UPP5 1409 aa28.22■■■□□ 2.11
CKLF-CMTM1-202ENST00000527845 C3P01024 1663 aa28.22■■■□□ 2.11
CKLF-CMTM1-202ENST00000527845 MTUS2Q5JR59 1369 aa28.22■■■□□ 2.11
CKLF-CMTM1-202ENST00000527845 CNTLNQ9NXG0 1405 aa28.21■■■□□ 2.11
CKLF-CMTM1-202ENST00000527845 ZNF777Q9ULD5 760 aaPredicted RBP28.2■■■□□ 2.1
CKLF-CMTM1-202ENST00000527845 CCNB3Q8WWL7 1395 aa28.2■■■□□ 2.1
CKLF-CMTM1-202ENST00000527845 CEBPAP49715 358 aaPredicted RBP28.19■■■□□ 2.1
CKLF-CMTM1-202ENST00000527845 EHBP1L1Q8N3D4 1523 aa28.18■■■□□ 2.1
CKLF-CMTM1-202ENST00000527845 CFDP1Q9UEE9 299 aaPredicted RBP28.17■■■□□ 2.1
CKLF-CMTM1-202ENST00000527845 ATP7AQ04656 1500 aa28.17■■■□□ 2.1
CKLF-CMTM1-202ENST00000527845 SPAG9O60271 1321 aaKnown RBP28.17■■■□□ 2.1
CKLF-CMTM1-202ENST00000527845 INO80Q9ULG1 1556 aaPredicted RBP28.16■■■□□ 2.1
CKLF-CMTM1-202ENST00000527845 MROH2AA6NES4 1674 aa28.15■■■□□ 2.1
CKLF-CMTM1-202ENST00000527845 DMRT2Q9Y5R5 561 aa28.12■■■□□ 2.09
CKLF-CMTM1-202ENST00000527845 TIAM1Q13009 1591 aa28.11■■■□□ 2.09
CKLF-CMTM1-202ENST00000527845 CEP162Q5TB80 1403 aa28.11■■■□□ 2.09
CKLF-CMTM1-202ENST00000527845 HNRNPMP52272 730 aaKnown RBP eCLIP28.1■■■□□ 2.09
CKLF-CMTM1-202ENST00000527845 PLXNC1O60486 1568 aa28.1■■■□□ 2.09
CKLF-CMTM1-202ENST00000527845 SUPT6HQ7KZ85 1726 aaKnown RBP28.09■■■□□ 2.09
CKLF-CMTM1-202ENST00000527845 STRCQ7RTU9 1775 aa28.09■■■□□ 2.09
CKLF-CMTM1-202ENST00000527845 ADGBQ8N7X0 1667 aa28.07■■■□□ 2.08
CKLF-CMTM1-202ENST00000527845 A2MP01023 1474 aa28.06■■■□□ 2.08
CKLF-CMTM1-202ENST00000527845 NPATQ14207 1427 aa28.05■■■□□ 2.08
CKLF-CMTM1-202ENST00000527845 CERKQ8TCT0 537 aa28.03■■■□□ 2.08
CKLF-CMTM1-202ENST00000527845 PTPRTO14522 1441 aa28■■■□□ 2.07
CKLF-CMTM1-202ENST00000527845 CLTCQ00610 1675 aaKnown RBP27.98■■■□□ 2.07
CKLF-CMTM1-202ENST00000527845 MBD5Q9P267 1494 aa27.98■■■□□ 2.07
CKLF-CMTM1-202ENST00000527845 RTEL1-TNFRSF6BF6WH68 1400 aa27.98■■■□□ 2.07
CKLF-CMTM1-202ENST00000527845 ZMYM3Q14202 1370 aa27.97■■■□□ 2.07
CKLF-CMTM1-202ENST00000527845 PPP6R1Q9UPN7 881 aa27.96■■■□□ 2.07
CKLF-CMTM1-202ENST00000527845 NCOA2Q15596 1464 aa27.94■■■□□ 2.06
CKLF-CMTM1-202ENST00000527845 NCOA1Q15788 1441 aa27.92■■■□□ 2.06
CKLF-CMTM1-202ENST00000527845 ZNF142P52746 1687 aaPredicted RBP27.92■■■□□ 2.06
CKLF-CMTM1-202ENST00000527845 ZNF644Q9H582 1327 aaPredicted RBP27.92■■■□□ 2.06
CKLF-CMTM1-202ENST00000527845 CCDC141Q6ZP82 1450 aa27.91■■■□□ 2.06
CKLF-CMTM1-202ENST00000527845 CAMSAP2Q08AD1 1489 aa27.89■■■□□ 2.06
CKLF-CMTM1-202ENST00000527845 MYO3AQ8NEV4 1616 aa27.89■■■□□ 2.06
CKLF-CMTM1-202ENST00000527845 RSPH4AQ5TD94 716 aa27.89■■■□□ 2.06
CKLF-CMTM1-202ENST00000527845 FAM135AQ9P2D6 1515 aa27.88■■■□□ 2.05
CKLF-CMTM1-202ENST00000527845 CAMSAP1Q5T5Y3 1602 aa27.88■■■□□ 2.05
CKLF-CMTM1-202ENST00000527845 GGT6Q6P531 493 aa27.87■■■□□ 2.05
CKLF-CMTM1-202ENST00000527845 DHX29Q7Z478 1369 aaKnown RBP27.86■■■□□ 2.05
CKLF-CMTM1-202ENST00000527845 VPS8Q8N3P4 1428 aa27.86■■■□□ 2.05
CKLF-CMTM1-202ENST00000527845 PTPRKQ15262 1439 aa27.85■■■□□ 2.05
CKLF-CMTM1-202ENST00000527845 ARHGEF5Q12774 1597 aa27.85■■■□□ 2.05
CKLF-CMTM1-202ENST00000527845 CEP170BQ9Y4F5 1589 aaPredicted RBP27.83■■■□□ 2.05
CKLF-CMTM1-202ENST00000527845 PLA2R1Q13018 1463 aa27.82■■■□□ 2.04
CKLF-CMTM1-202ENST00000527845 IQSEC2Q5JU85 1478 aa27.8■■■□□ 2.04
CKLF-CMTM1-202ENST00000527845 LRRC9Q6ZRR7 1453 aa27.8■■■□□ 2.04
CKLF-CMTM1-202ENST00000527845 MAP3K1Q13233 1512 aa27.79■■■□□ 2.04
CKLF-CMTM1-202ENST00000527845 LTBP4Q8N2S1 1624 aa27.78■■■□□ 2.04
CKLF-CMTM1-202ENST00000527845 KDM5DQ9BY66 1539 aa27.77■■■□□ 2.04
CKLF-CMTM1-202ENST00000527845 PKD2Q13563 968 aa27.75■■■□□ 2.03
CKLF-CMTM1-202ENST00000527845 A2ML1A8K2U0 1454 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms