RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 ADAMTSL3P82987 1691 aa36.39■■■■□ 3.42
LRRK1-206ENST00000527698 RAPGEF3O95398 923 aa36.37■■■■□ 3.41
LRRK1-206ENST00000527698 LRRC9Q6ZRR7 1453 aa36.37■■■■□ 3.41
LRRK1-206ENST00000527698 SUPT6HQ7KZ85 1726 aaKnown RBP36.34■■■■□ 3.41
LRRK1-206ENST00000527698 FANCAO15360 1455 aa36.33■■■■□ 3.41
LRRK1-206ENST00000527698 EFCAB2Q5VUJ9 269 aa36.32■■■■□ 3.4
LRRK1-206ENST00000527698 BCORL1Q5H9F3 1711 aa36.28■■■■□ 3.4
LRRK1-206ENST00000527698 PTPRMP28827 1452 aa36.28■■■■□ 3.4
LRRK1-206ENST00000527698 CCNB3Q8WWL7 1395 aa36.27■■■■□ 3.4
LRRK1-206ENST00000527698 PREX2Q70Z35 1606 aa36.27■■■■□ 3.4
LRRK1-206ENST00000527698 CDC42BPAQ5VT25 1732 aa36.27■■■■□ 3.4
LRRK1-206ENST00000527698 RICTORQ6R327 1708 aa36.26■■■■□ 3.4
LRRK1-206ENST00000527698 CDC42BPBQ9Y5S2 1711 aa36.25■■■■□ 3.39
LRRK1-206ENST00000527698 ARHGAP5Q13017 1502 aa36.25■■■■□ 3.39
LRRK1-206ENST00000527698 AKNAQ7Z591 1439 aa36.25■■■■□ 3.39
LRRK1-206ENST00000527698 DENND4BO75064 1496 aaPredicted RBP36.23■■■■□ 3.39
LRRK1-206ENST00000527698 ARHGEF40Q8TER5 1519 aa36.23■■■■□ 3.39
LRRK1-206ENST00000527698 KANK4Q5T7N3 995 aaPredicted RBP36.22■■■■□ 3.39
LRRK1-206ENST00000527698 NCOA2Q15596 1464 aa36.21■■■■□ 3.39
LRRK1-206ENST00000527698 ITSN2Q9NZM3 1697 aa36.21■■■■□ 3.39
LRRK1-206ENST00000527698 GPATCH8Q9UKJ3 1502 aaKnown RBP36.21■■■■□ 3.39
LRRK1-206ENST00000527698 MADDQ8WXG6 1647 aa36.17■■■■□ 3.38
LRRK1-206ENST00000527698 CFDP1Q9UEE9 299 aaPredicted RBP36.15■■■■□ 3.38
LRRK1-206ENST00000527698 ZMYM4Q5VZL5 1548 aa36.14■■■■□ 3.38
LRRK1-206ENST00000527698 ARID4BQ4LE39 1312 aaPredicted RBP36.12■■■■□ 3.37
LRRK1-206ENST00000527698 PLEKHH2Q8IVE3 1493 aa36.07■■■■□ 3.37
LRRK1-206ENST00000527698 SCAPERQ9BY12 1400 aa36.07■■■■□ 3.36
LRRK1-206ENST00000527698 MAGI2Q86UL8 1455 aa36.05■■■■□ 3.36
LRRK1-206ENST00000527698 RIMS1Q86UR5 1692 aaKnown RBP36.03■■■■□ 3.36
LRRK1-206ENST00000527698 ZFYVE16Q7Z3T8 1539 aa36.03■■■■□ 3.36
LRRK1-206ENST00000527698 ZNF777Q9ULD5 760 aaPredicted RBP36.01■■■■□ 3.36
LRRK1-206ENST00000527698 KIAA1107Q9UPP5 1409 aa36■■■■□ 3.35
LRRK1-206ENST00000527698 MYOM3Q5VTT5 1437 aa36■■■■□ 3.35
LRRK1-206ENST00000527698 POGZQ7Z3K3 1410 aa36■■■■□ 3.35
LRRK1-206ENST00000527698 ABCC1P33527 1531 aa35.99■■■■□ 3.35
LRRK1-206ENST00000527698 MIA2Q96PC5 1412 aa35.99■■■■□ 3.35
LRRK1-206ENST00000527698 ZNF518AQ6AHZ1 1483 aa35.98■■■■□ 3.35
LRRK1-206ENST00000527698 SAMD9LQ8IVG5 1584 aa35.98■■■■□ 3.35
LRRK1-206ENST00000527698 LMTK3Q96Q04 1460 aa35.96■■■■□ 3.35
LRRK1-206ENST00000527698 SIGLEC1Q9BZZ2 1709 aa35.95■■■■□ 3.35
LRRK1-206ENST00000527698 YEATS2Q9ULM3 1422 aa35.95■■■■□ 3.35
LRRK1-206ENST00000527698 RSPH4AQ5TD94 716 aa35.91■■■■□ 3.34
LRRK1-206ENST00000527698 KDM5CP41229 1560 aa35.86■■■■□ 3.33
LRRK1-206ENST00000527698 SYCP2Q9BX26 1530 aa35.86■■■■□ 3.33
LRRK1-206ENST00000527698 ARHGEF12Q9NZN5 1544 aa35.86■■■■□ 3.33
LRRK1-206ENST00000527698 CAMSAP2Q08AD1 1489 aa35.85■■■■□ 3.33
LRRK1-206ENST00000527698 FBXO41Q8TF61 875 aa35.84■■■■□ 3.33
LRRK1-206ENST00000527698 FER1L4A9Z1Z3 1794 aa35.84■■■■□ 3.33
LRRK1-206ENST00000527698 HNRNPMP52272 730 aaKnown RBP eCLIP35.83■■■■□ 3.33
LRRK1-206ENST00000527698 AFAP1Q8N556 730 aa35.83■■■■□ 3.33
LRRK1-206ENST00000527698 ZNF644Q9H582 1327 aaPredicted RBP35.82■■■■□ 3.32
LRRK1-206ENST00000527698 TRAPPC8Q9Y2L5 1435 aa35.81■■■■□ 3.32
LRRK1-206ENST00000527698 FGD6Q6ZV73 1430 aa35.8■■■■□ 3.32
LRRK1-206ENST00000527698 ATP10AO60312 1499 aa35.8■■■■□ 3.32
LRRK1-206ENST00000527698 MLH3Q9UHC1 1453 aa35.79■■■■□ 3.32
LRRK1-206ENST00000527698 MBD5Q9P267 1494 aa35.78■■■■□ 3.32
LRRK1-206ENST00000527698 C9orf84Q5VXU9 1444 aa35.77■■■■□ 3.32
LRRK1-206ENST00000527698 PTPN23Q9H3S7 1636 aa35.76■■■■□ 3.32
LRRK1-206ENST00000527698 ARHGEF5Q12774 1597 aa35.76■■■■□ 3.31
LRRK1-206ENST00000527698 MYT1LQ9UL68 1186 aa35.73■■■■□ 3.31
LRRK1-206ENST00000527698 SPAG9O60271 1321 aaKnown RBP35.72■■■■□ 3.31
LRRK1-206ENST00000527698 TCOF1Q13428 1488 aaKnown RBP35.72■■■■□ 3.31
LRRK1-206ENST00000527698 CCDC141Q6ZP82 1450 aa35.72■■■■□ 3.31
LRRK1-206ENST00000527698 MLECQ14165 292 aa35.7■■■■□ 3.31
LRRK1-206ENST00000527698 TSPY4P0CV99 314 aa35.68■■■■□ 3.3
LRRK1-206ENST00000527698 TSPY10P0CW01 314 aa35.68■■■■□ 3.3
LRRK1-206ENST00000527698 RTEL1-TNFRSF6BF6WH68 1400 aa35.67■■■■□ 3.3
LRRK1-206ENST00000527698 PPARGC1BQ86YN6 1023 aaKnown RBP35.67■■■■□ 3.3
LRRK1-206ENST00000527698 KIDINS220Q9ULH0 1771 aa35.65■■■■□ 3.3
LRRK1-206ENST00000527698 HSPA2P54652 639 aa35.64■■■■□ 3.3
LRRK1-206ENST00000527698 PLPPR3Q6T4P5 718 aa35.64■■■■□ 3.3
LRRK1-206ENST00000527698 ATP7AQ04656 1500 aa35.62■■■■□ 3.29
LRRK1-206ENST00000527698 REREQ9P2R6 1566 aa35.62■■■■□ 3.29
LRRK1-206ENST00000527698 INO80Q9ULG1 1556 aaPredicted RBP35.62■■■■□ 3.29
LRRK1-206ENST00000527698 PREX1Q8TCU6 1659 aa35.61■■■■□ 3.29
LRRK1-206ENST00000527698 DIP2CQ9Y2E4 1556 aa35.59■■■■□ 3.29
LRRK1-206ENST00000527698 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.58■■■■□ 3.29
LRRK1-206ENST00000527698 MAST1Q9Y2H9 1570 aa35.55■■■■□ 3.28
LRRK1-206ENST00000527698 DNMT1P26358 1616 aaKnown RBP35.55■■■■□ 3.28
LRRK1-206ENST00000527698 ABCA6Q8N139 1617 aa35.55■■■■□ 3.28
LRRK1-206ENST00000527698 FAM50AQ14320 339 aaKnown RBP35.55■■■■□ 3.28
LRRK1-206ENST00000527698 SHANK2Q9UPX8 1470 aa35.53■■■■□ 3.28
LRRK1-206ENST00000527698 ADGBQ8N7X0 1667 aa35.52■■■■□ 3.28
LRRK1-206ENST00000527698 CROCC2H7BZ55 1655 aa35.51■■■■□ 3.28
LRRK1-206ENST00000527698 DAPK1P53355 1430 aa35.5■■■■□ 3.27
LRRK1-206ENST00000527698 ABCC5O15440 1437 aa35.49■■■■□ 3.27
LRRK1-206ENST00000527698 RRBP1Q9P2E9 1410 aaKnown RBP35.48■■■■□ 3.27
LRRK1-206ENST00000527698 SETD1BQ9UPS6 1966 aaKnown RBP35.47■■■■□ 3.27
LRRK1-206ENST00000527698 AGLP35573 1532 aa35.47■■■■□ 3.27
LRRK1-206ENST00000527698 CEBPAP49715 358 aaPredicted RBP35.43■■■■□ 3.26
LRRK1-206ENST00000527698 A2MP01023 1474 aa35.42■■■■□ 3.26
LRRK1-206ENST00000527698 PLXNC1O60486 1568 aa35.42■■■■□ 3.26
LRRK1-206ENST00000527698 C3P01024 1663 aa35.39■■■■□ 3.26
LRRK1-206ENST00000527698 UHRF1BP1Q6BDS2 1440 aa35.39■■■■□ 3.26
LRRK1-206ENST00000527698 DHX29Q7Z478 1369 aaKnown RBP35.38■■■■□ 3.26
LRRK1-206ENST00000527698 CERKQ8TCT0 537 aa35.36■■■■□ 3.25
LRRK1-206ENST00000527698 ANKRD30AQ9BXX3 1397 aa35.36■■■■□ 3.25
LRRK1-206ENST00000527698 STRCQ7RTU9 1775 aa35.36■■■■□ 3.25
LRRK1-206ENST00000527698 ADGRL2O95490 1459 aa35.31■■■■□ 3.24
LRRK1-206ENST00000527698 DMRT2Q9Y5R5 561 aa35.31■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms