RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 YEATS2Q9ULM3 1422 aa36.42■■■■□ 3.42
TRAPPC4-208ENST00000527680 MADDQ8WXG6 1647 aa36.42■■■■□ 3.42
TRAPPC4-208ENST00000527680 PLPPR3Q6T4P5 718 aa36.42■■■■□ 3.42
TRAPPC4-208ENST00000527680 ZMYM4Q5VZL5 1548 aa36.42■■■■□ 3.42
TRAPPC4-208ENST00000527680 MAGI2Q86UL8 1455 aa36.42■■■■□ 3.42
TRAPPC4-208ENST00000527680 KIF14Q15058 1648 aa36.41■■■■□ 3.42
TRAPPC4-208ENST00000527680 MLECQ14165 292 aa36.4■■■■□ 3.42
TRAPPC4-208ENST00000527680 MYT1LQ9UL68 1186 aa36.37■■■■□ 3.41
TRAPPC4-208ENST00000527680 LRRIQ1Q96JM4 1722 aa36.35■■■■□ 3.41
TRAPPC4-208ENST00000527680 ARHGAP5Q13017 1502 aa36.34■■■■□ 3.41
TRAPPC4-208ENST00000527680 CASKIN1Q8WXD9 1431 aa36.34■■■■□ 3.41
TRAPPC4-208ENST00000527680 RIMS1Q86UR5 1692 aaKnown RBP36.32■■■■□ 3.41
TRAPPC4-208ENST00000527680 AFAP1Q8N556 730 aa36.3■■■■□ 3.4
TRAPPC4-208ENST00000527680 CCDC18Q5T9S5 1454 aa36.29■■■■□ 3.4
TRAPPC4-208ENST00000527680 PCF11O94913 1555 aaKnown RBP36.27■■■■□ 3.4
TRAPPC4-208ENST00000527680 ATP10AO60312 1499 aa36.27■■■■□ 3.4
TRAPPC4-208ENST00000527680 ZNF518AQ6AHZ1 1483 aa36.23■■■■□ 3.39
TRAPPC4-208ENST00000527680 SIGLEC1Q9BZZ2 1709 aa36.22■■■■□ 3.39
TRAPPC4-208ENST00000527680 C9orf84Q5VXU9 1444 aa36.2■■■■□ 3.39
TRAPPC4-208ENST00000527680 CDC42BPBQ9Y5S2 1711 aa36.17■■■■□ 3.38
TRAPPC4-208ENST00000527680 FYCO1Q9BQS8 1478 aa36.16■■■■□ 3.38
TRAPPC4-208ENST00000527680 LMTK3Q96Q04 1460 aa36.13■■■■□ 3.37
TRAPPC4-208ENST00000527680 ZNF777Q9ULD5 760 aaPredicted RBP36.13■■■■□ 3.37
TRAPPC4-208ENST00000527680 FER1L4A9Z1Z3 1794 aa36.12■■■■□ 3.37
TRAPPC4-208ENST00000527680 HSPA2P54652 639 aa36.11■■■■□ 3.37
TRAPPC4-208ENST00000527680 PREX2Q70Z35 1606 aa36.09■■■■□ 3.37
TRAPPC4-208ENST00000527680 KDM5CP41229 1560 aa36.08■■■■□ 3.37
TRAPPC4-208ENST00000527680 TRAPPC8Q9Y2L5 1435 aa36.05■■■■□ 3.36
TRAPPC4-208ENST00000527680 CEBPAP49715 358 aaPredicted RBP36.04■■■■□ 3.36
TRAPPC4-208ENST00000527680 ARHGEF12Q9NZN5 1544 aa36.03■■■■□ 3.36
TRAPPC4-208ENST00000527680 MLH3Q9UHC1 1453 aa36.02■■■■□ 3.36
TRAPPC4-208ENST00000527680 CDC42BPAQ5VT25 1732 aa36.02■■■■□ 3.36
TRAPPC4-208ENST00000527680 ABCC1P33527 1531 aa36.01■■■■□ 3.36
TRAPPC4-208ENST00000527680 ESF1Q9H501 851 aaKnown RBP35.99■■■■□ 3.35
TRAPPC4-208ENST00000527680 DIP2CQ9Y2E4 1556 aa35.98■■■■□ 3.35
TRAPPC4-208ENST00000527680 ITSN2Q9NZM3 1697 aa35.96■■■■□ 3.35
TRAPPC4-208ENST00000527680 MTUS2Q5JR59 1369 aa35.95■■■■□ 3.35
TRAPPC4-208ENST00000527680 HNRNPMP52272 730 aaKnown RBP eCLIP35.95■■■■□ 3.35
TRAPPC4-208ENST00000527680 CFDP1Q9UEE9 299 aaPredicted RBP35.95■■■■□ 3.35
TRAPPC4-208ENST00000527680 GPATCH8Q9UKJ3 1502 aaKnown RBP35.93■■■■□ 3.34
TRAPPC4-208ENST00000527680 FBXO41Q8TF61 875 aa35.93■■■■□ 3.34
TRAPPC4-208ENST00000527680 ABCA6Q8N139 1617 aa35.93■■■■□ 3.34
TRAPPC4-208ENST00000527680 CCNB3Q8WWL7 1395 aa35.92■■■■□ 3.34
TRAPPC4-208ENST00000527680 REREQ9P2R6 1566 aa35.89■■■■□ 3.34
TRAPPC4-208ENST00000527680 SPAG9O60271 1321 aaKnown RBP35.88■■■■□ 3.33
TRAPPC4-208ENST00000527680 SAMD9LQ8IVG5 1584 aa35.85■■■■□ 3.33
TRAPPC4-208ENST00000527680 KIDINS220Q9ULH0 1771 aa35.85■■■■□ 3.33
TRAPPC4-208ENST00000527680 SYCP2Q9BX26 1530 aa35.83■■■■□ 3.33
TRAPPC4-208ENST00000527680 AGLP35573 1532 aa35.82■■■■□ 3.32
TRAPPC4-208ENST00000527680 CEP162Q5TB80 1403 aa35.82■■■■□ 3.32
TRAPPC4-208ENST00000527680 PREX1Q8TCU6 1659 aa35.8■■■■□ 3.32
TRAPPC4-208ENST00000527680 SETD1BQ9UPS6 1966 aaKnown RBP35.8■■■■□ 3.32
TRAPPC4-208ENST00000527680 PLEKHH2Q8IVE3 1493 aa35.78■■■■□ 3.32
TRAPPC4-208ENST00000527680 KIAA1107Q9UPP5 1409 aa35.77■■■■□ 3.32
TRAPPC4-208ENST00000527680 UHRF1BP1Q6BDS2 1440 aa35.75■■■■□ 3.31
TRAPPC4-208ENST00000527680 ZNF644Q9H582 1327 aaPredicted RBP35.72■■■■□ 3.31
TRAPPC4-208ENST00000527680 C3P01024 1663 aa35.69■■■■□ 3.3
TRAPPC4-208ENST00000527680 DMRT2Q9Y5R5 561 aa35.69■■■■□ 3.3
TRAPPC4-208ENST00000527680 CNTLNQ9NXG0 1405 aa35.68■■■■□ 3.3
TRAPPC4-208ENST00000527680 ATP7AQ04656 1500 aa35.67■■■■□ 3.3
TRAPPC4-208ENST00000527680 EHBP1L1Q8N3D4 1523 aa35.67■■■■□ 3.3
TRAPPC4-208ENST00000527680 SUPT6HQ7KZ85 1726 aaKnown RBP35.67■■■■□ 3.3
TRAPPC4-208ENST00000527680 LOC105371045A0A1W2PR82 267 aa35.67■■■■□ 3.3
TRAPPC4-208ENST00000527680 CERKQ8TCT0 537 aa35.64■■■■□ 3.3
TRAPPC4-208ENST00000527680 GGT6Q6P531 493 aa35.63■■■■□ 3.29
TRAPPC4-208ENST00000527680 TIAM1Q13009 1591 aa35.63■■■■□ 3.29
TRAPPC4-208ENST00000527680 A2MP01023 1474 aa35.61■■■■□ 3.29
TRAPPC4-208ENST00000527680 ZMYM3Q14202 1370 aa35.59■■■■□ 3.29
TRAPPC4-208ENST00000527680 INO80Q9ULG1 1556 aaPredicted RBP35.57■■■■□ 3.28
TRAPPC4-208ENST00000527680 STRCQ7RTU9 1775 aa35.54■■■■□ 3.28
TRAPPC4-208ENST00000527680 MBD5Q9P267 1494 aa35.53■■■■□ 3.28
TRAPPC4-208ENST00000527680 NCOA2Q15596 1464 aa35.51■■■■□ 3.28
TRAPPC4-208ENST00000527680 MROH2AA6NES4 1674 aa35.49■■■■□ 3.27
TRAPPC4-208ENST00000527680 PLXNC1O60486 1568 aa35.48■■■■□ 3.27
TRAPPC4-208ENST00000527680 RSPH4AQ5TD94 716 aa35.48■■■■□ 3.27
TRAPPC4-208ENST00000527680 ADGBQ8N7X0 1667 aa35.47■■■■□ 3.27
TRAPPC4-208ENST00000527680 PPP6R1Q9UPN7 881 aa35.47■■■■□ 3.27
TRAPPC4-208ENST00000527680 RTEL1-TNFRSF6BF6WH68 1400 aa35.47■■■■□ 3.27
TRAPPC4-208ENST00000527680 NPATQ14207 1427 aa35.47■■■■□ 3.27
TRAPPC4-208ENST00000527680 CLTCQ00610 1675 aaKnown RBP35.46■■■■□ 3.27
TRAPPC4-208ENST00000527680 VPS8Q8N3P4 1428 aa35.42■■■■□ 3.26
TRAPPC4-208ENST00000527680 DHX29Q7Z478 1369 aaKnown RBP35.41■■■■□ 3.26
TRAPPC4-208ENST00000527680 KIF3BO15066 747 aa35.41■■■■□ 3.26
TRAPPC4-208ENST00000527680 CAMSAP2Q08AD1 1489 aa35.41■■■■□ 3.26
TRAPPC4-208ENST00000527680 TSPY4P0CV99 314 aa35.4■■■■□ 3.26
TRAPPC4-208ENST00000527680 TSPY10P0CW01 314 aa35.4■■■■□ 3.26
TRAPPC4-208ENST00000527680 PTPRTO14522 1441 aa35.4■■■■□ 3.26
TRAPPC4-208ENST00000527680 CCDC141Q6ZP82 1450 aa35.39■■■■□ 3.26
TRAPPC4-208ENST00000527680 LRRC9Q6ZRR7 1453 aa35.35■■■■□ 3.25
TRAPPC4-208ENST00000527680 NCOA1Q15788 1441 aa35.34■■■■□ 3.25
TRAPPC4-208ENST00000527680 PTPRKQ15262 1439 aa35.33■■■■□ 3.25
TRAPPC4-208ENST00000527680 CAMSAP1Q5T5Y3 1602 aa35.32■■■■□ 3.25
TRAPPC4-208ENST00000527680 NCKAP5LQ9HCH0 1330 aa35.32■■■■□ 3.24
TRAPPC4-208ENST00000527680 KANK4Q5T7N3 995 aaPredicted RBP35.31■■■■□ 3.24
TRAPPC4-208ENST00000527680 WASHC2CQ9Y4E1 1318 aa35.27■■■■□ 3.24
TRAPPC4-208ENST00000527680 APLP2Q06481 763 aa35.24■■■■□ 3.23
TRAPPC4-208ENST00000527680 ARHGEF5Q12774 1597 aa35.22■■■■□ 3.23
TRAPPC4-208ENST00000527680 MYO3AQ8NEV4 1616 aa35.22■■■■□ 3.23
TRAPPC4-208ENST00000527680 PKD2Q13563 968 aa35.22■■■■□ 3.23
TRAPPC4-208ENST00000527680 FBXO31Q5XUX0 539 aaPredicted RBP35.21■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 1850.1 ms