RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CDC42BPBQ9Y5S2 1711 aa28.38■■■□□ 2.13
SMPD1-203ENST00000527275 PLCH2O75038 1416 aa28.38■■■□□ 2.13
SMPD1-203ENST00000527275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.36■■■□□ 2.13
SMPD1-203ENST00000527275 TCOF1Q13428 1488 aaKnown RBP28.35■■■□□ 2.13
SMPD1-203ENST00000527275 ARHGAP5Q13017 1502 aa28.35■■■□□ 2.13
SMPD1-203ENST00000527275 ITGAEP38570 1179 aa28.34■■■□□ 2.13
SMPD1-203ENST00000527275 FAM69CQ0P6D2 419 aa28.33■■■□□ 2.13
SMPD1-203ENST00000527275 DIP2BQ9P265 1576 aa28.32■■■□□ 2.12
SMPD1-203ENST00000527275 CD109Q6YHK3 1445 aa28.32■■■□□ 2.12
SMPD1-203ENST00000527275 CAMSAP2Q08AD1 1489 aa28.31■■■□□ 2.12
SMPD1-203ENST00000527275 GLI2P10070 1586 aa28.29■■■□□ 2.12
SMPD1-203ENST00000527275 EFCAB2Q5VUJ9 269 aa28.29■■■□□ 2.12
SMPD1-203ENST00000527275 ARAP3Q8WWN8 1544 aa28.27■■■□□ 2.12
SMPD1-203ENST00000527275 SAMD9LQ8IVG5 1584 aa28.26■■■□□ 2.11
SMPD1-203ENST00000527275 ZEB1P37275 1124 aaPredicted RBP28.24■■■□□ 2.11
SMPD1-203ENST00000527275 FANCAO15360 1455 aa28.24■■■□□ 2.11
SMPD1-203ENST00000527275 MAP3K4Q9Y6R4 1608 aa28.24■■■□□ 2.11
SMPD1-203ENST00000527275 HNRNPMP52272 730 aaKnown RBP eCLIP28.21■■■□□ 2.11
SMPD1-203ENST00000527275 KIF13AQ9H1H9 1805 aa28.2■■■□□ 2.11
SMPD1-203ENST00000527275 PTPRKQ15262 1439 aa28.19■■■□□ 2.1
SMPD1-203ENST00000527275 ABCC5O15440 1437 aa28.17■■■□□ 2.1
SMPD1-203ENST00000527275 DAPK1P53355 1430 aa28.17■■■□□ 2.1
SMPD1-203ENST00000527275 MBD5Q9P267 1494 aa28.16■■■□□ 2.1
SMPD1-203ENST00000527275 SYCP2Q9BX26 1530 aa28.16■■■□□ 2.1
SMPD1-203ENST00000527275 DNMT1P26358 1616 aaKnown RBP28.16■■■□□ 2.1
SMPD1-203ENST00000527275 KIAA1107Q9UPP5 1409 aa28.15■■■□□ 2.1
SMPD1-203ENST00000527275 PLEKHH2Q8IVE3 1493 aa28.15■■■□□ 2.1
SMPD1-203ENST00000527275 ARHGEF12Q9NZN5 1544 aa28.14■■■□□ 2.09
SMPD1-203ENST00000527275 ABCC1P33527 1531 aa28.13■■■□□ 2.09
SMPD1-203ENST00000527275 CHIC2Q9UKJ5 165 aa28.13■■■□□ 2.09
SMPD1-203ENST00000527275 AKNAQ7Z591 1439 aa28.12■■■□□ 2.09
SMPD1-203ENST00000527275 TSPOAP1O95153 1857 aa28.12■■■□□ 2.09
SMPD1-203ENST00000527275 ADGRL1O94910 1474 aa28.1■■■□□ 2.09
SMPD1-203ENST00000527275 ARHGEF5Q12774 1597 aa28.09■■■□□ 2.09
SMPD1-203ENST00000527275 RSPH4AQ5TD94 716 aa28.09■■■□□ 2.09
SMPD1-203ENST00000527275 TRHP20396 242 aaPredicted RBP28.09■■■□□ 2.09
SMPD1-203ENST00000527275 CCER1Q8TC90 406 aaPredicted RBP28.09■■■□□ 2.09
SMPD1-203ENST00000527275 NEO1Q92859 1461 aa28.08■■■□□ 2.09
SMPD1-203ENST00000527275 SCAPERQ9BY12 1400 aa28.08■■■□□ 2.09
SMPD1-203ENST00000527275 CFAP74Q9C0B2 1584 aa28.07■■■□□ 2.08
SMPD1-203ENST00000527275 CCDC141Q6ZP82 1450 aa28.07■■■□□ 2.08
SMPD1-203ENST00000527275 PPRC1Q5VV67 1664 aaKnown RBP28.06■■■□□ 2.08
SMPD1-203ENST00000527275 TRAPPC8Q9Y2L5 1435 aa28.06■■■□□ 2.08
SMPD1-203ENST00000527275 TSPY4P0CV99 314 aa28.05■■■□□ 2.08
SMPD1-203ENST00000527275 TSPY10P0CW01 314 aa28.05■■■□□ 2.08
SMPD1-203ENST00000527275 AFAP1Q8N556 730 aa28.04■■■□□ 2.08
SMPD1-203ENST00000527275 CROCC2H7BZ55 1655 aa28.04■■■□□ 2.08
SMPD1-203ENST00000527275 TEX14Q8IWB6 1497 aa28.02■■■□□ 2.08
SMPD1-203ENST00000527275 RRP7BPQ9NSQ0 103 aa28.01■■■□□ 2.07
SMPD1-203ENST00000527275 C9orf84Q5VXU9 1444 aa28■■■□□ 2.07
SMPD1-203ENST00000527275 SHANK2Q9UPX8 1470 aa28■■■□□ 2.07
SMPD1-203ENST00000527275 ROCK1Q13464 1354 aa27.97■■■□□ 2.07
SMPD1-203ENST00000527275 HFM1A2PYH4 1435 aa27.96■■■□□ 2.07
SMPD1-203ENST00000527275 NCOA1Q15788 1441 aa27.96■■■□□ 2.07
SMPD1-203ENST00000527275 NAIPQ13075 1403 aa27.94■■■□□ 2.06
SMPD1-203ENST00000527275 RAPGEF3O95398 923 aa27.94■■■□□ 2.06
SMPD1-203ENST00000527275 ADGRL2O95490 1459 aa27.94■■■□□ 2.06
SMPD1-203ENST00000527275 POGZQ7Z3K3 1410 aa27.93■■■□□ 2.06
SMPD1-203ENST00000527275 SETD5Q9C0A6 1442 aa27.93■■■□□ 2.06
SMPD1-203ENST00000527275 ZNF518AQ6AHZ1 1483 aa27.93■■■□□ 2.06
SMPD1-203ENST00000527275 ANKRD30AQ9BXX3 1397 aa27.93■■■□□ 2.06
SMPD1-203ENST00000527275 SPAG9O60271 1321 aaKnown RBP27.92■■■□□ 2.06
SMPD1-203ENST00000527275 DENND4BO75064 1496 aaPredicted RBP27.92■■■□□ 2.06
SMPD1-203ENST00000527275 ADGBQ8N7X0 1667 aa27.92■■■□□ 2.06
SMPD1-203ENST00000527275 MAST1Q9Y2H9 1570 aa27.9■■■□□ 2.06
SMPD1-203ENST00000527275 RAB3GAP2Q9H2M9 1393 aa27.9■■■□□ 2.06
SMPD1-203ENST00000527275 KDM5CP41229 1560 aa27.86■■■□□ 2.05
SMPD1-203ENST00000527275 RTEL1-TNFRSF6BF6WH68 1400 aa27.85■■■□□ 2.05
SMPD1-203ENST00000527275 MYT1LQ9UL68 1186 aa27.85■■■□□ 2.05
SMPD1-203ENST00000527275 ZFYVE16Q7Z3T8 1539 aa27.85■■■□□ 2.05
SMPD1-203ENST00000527275 KIF15Q9NS87 1388 aa27.85■■■□□ 2.05
SMPD1-203ENST00000527275 GCC2Q8IWJ2 1684 aa27.84■■■□□ 2.05
SMPD1-203ENST00000527275 RICTORQ6R327 1708 aa27.84■■■□□ 2.05
SMPD1-203ENST00000527275 COL17A1Q9UMD9 1497 aaPredicted RBP27.83■■■□□ 2.05
SMPD1-203ENST00000527275 ATP7AQ04656 1500 aa27.82■■■□□ 2.04
SMPD1-203ENST00000527275 INO80Q9ULG1 1556 aaPredicted RBP27.82■■■□□ 2.04
SMPD1-203ENST00000527275 PLXNC1O60486 1568 aa27.8■■■□□ 2.04
SMPD1-203ENST00000527275 FRMPD1Q5SYB0 1578 aa27.8■■■□□ 2.04
SMPD1-203ENST00000527275 KDM6BO15054 1643 aa27.79■■■□□ 2.04
SMPD1-203ENST00000527275 MLH3Q9UHC1 1453 aa27.79■■■□□ 2.04
SMPD1-203ENST00000527275 ANKRD50Q9ULJ7 1429 aa27.78■■■□□ 2.04
SMPD1-203ENST00000527275 KIDINS220Q9ULH0 1771 aa27.78■■■□□ 2.04
SMPD1-203ENST00000527275 HECW2Q9P2P5 1572 aa27.77■■■□□ 2.04
SMPD1-203ENST00000527275 DUOX2Q9NRD8 1548 aa27.72■■■□□ 2.03
SMPD1-203ENST00000527275 ZMYM4Q5VZL5 1548 aa27.71■■■□□ 2.03
SMPD1-203ENST00000527275 YEATS2Q9ULM3 1422 aa27.68■■■□□ 2.02
SMPD1-203ENST00000527275 ABCA6Q8N139 1617 aa27.67■■■□□ 2.02
SMPD1-203ENST00000527275 ERBINQ96RT1 1412 aa27.66■■■□□ 2.02
SMPD1-203ENST00000527275 MAGI2Q86UL8 1455 aa27.65■■■□□ 2.02
SMPD1-203ENST00000527275 TRIM52Q96A61 297 aa27.65■■■□□ 2.02
SMPD1-203ENST00000527275 DHX29Q7Z478 1369 aaKnown RBP27.65■■■□□ 2.02
SMPD1-203ENST00000527275 DIP2CQ9Y2E4 1556 aa27.63■■■□□ 2.01
SMPD1-203ENST00000527275 DHX57Q6P158 1386 aaKnown RBP27.62■■■□□ 2.01
SMPD1-203ENST00000527275 A2MP01023 1474 aa27.62■■■□□ 2.01
SMPD1-203ENST00000527275 ACIN1Q9UKV3 1341 aaKnown RBP27.58■■■□□ 2.01
SMPD1-203ENST00000527275 KIF3BO15066 747 aa27.57■■■□□ 2
SMPD1-203ENST00000527275 NUP155O75694 1391 aa27.55■■■□□ 2
SMPD1-203ENST00000527275 ATP10AO60312 1499 aa27.54■■■□□ 2
SMPD1-203ENST00000527275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.53■■■□□ 2
SMPD1-203ENST00000527275 MPHOSPH9Q99550 1183 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms