RNA–Protein interactions for RNA: ENST00000527205.1

TTC39A-215, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-215ENST00000527205 RAPGEF3O95398 923 aa30.91■■■□□ 2.54
TTC39A-215ENST00000527205 ADGRL1O94910 1474 aa30.9■■■□□ 2.54
TTC39A-215ENST00000527205 DENND4BO75064 1496 aaPredicted RBP30.89■■■□□ 2.54
TTC39A-215ENST00000527205 SUPT6HQ7KZ85 1726 aaKnown RBP30.87■■■□□ 2.53
TTC39A-215ENST00000527205 GPATCH8Q9UKJ3 1502 aaKnown RBP30.86■■■□□ 2.53
TTC39A-215ENST00000527205 ITSN2Q9NZM3 1697 aa30.85■■■□□ 2.53
TTC39A-215ENST00000527205 EFCAB2Q5VUJ9 269 aa30.84■■■□□ 2.53
TTC39A-215ENST00000527205 MAP3K1Q13233 1512 aa30.83■■■□□ 2.53
TTC39A-215ENST00000527205 SCAPERQ9BY12 1400 aa30.83■■■□□ 2.53
TTC39A-215ENST00000527205 SAMD9LQ8IVG5 1584 aa30.83■■■□□ 2.53
TTC39A-215ENST00000527205 ABCC1P33527 1531 aa30.83■■■□□ 2.53
TTC39A-215ENST00000527205 ZMYM4Q5VZL5 1548 aa30.82■■■□□ 2.52
TTC39A-215ENST00000527205 LRRC9Q6ZRR7 1453 aa30.82■■■□□ 2.52
TTC39A-215ENST00000527205 POGZQ7Z3K3 1410 aa30.81■■■□□ 2.52
TTC39A-215ENST00000527205 ARHGEF40Q8TER5 1519 aa30.78■■■□□ 2.52
TTC39A-215ENST00000527205 ARHGEF12Q9NZN5 1544 aa30.78■■■□□ 2.52
TTC39A-215ENST00000527205 NCOA2Q15596 1464 aa30.78■■■□□ 2.52
TTC39A-215ENST00000527205 CCNB3Q8WWL7 1395 aa30.76■■■□□ 2.51
TTC39A-215ENST00000527205 KANK4Q5T7N3 995 aaPredicted RBP30.74■■■□□ 2.51
TTC39A-215ENST00000527205 KDM5CP41229 1560 aa30.73■■■□□ 2.51
TTC39A-215ENST00000527205 SIGLEC1Q9BZZ2 1709 aa30.71■■■□□ 2.51
TTC39A-215ENST00000527205 SYCP2Q9BX26 1530 aa30.71■■■□□ 2.51
TTC39A-215ENST00000527205 ZFYVE16Q7Z3T8 1539 aa30.7■■■□□ 2.51
TTC39A-215ENST00000527205 YEATS2Q9ULM3 1422 aa30.7■■■□□ 2.5
TTC39A-215ENST00000527205 ZNF518AQ6AHZ1 1483 aa30.69■■■□□ 2.5
TTC39A-215ENST00000527205 TRAPPC8Q9Y2L5 1435 aa30.68■■■□□ 2.5
TTC39A-215ENST00000527205 ZNF777Q9ULD5 760 aaPredicted RBP30.66■■■□□ 2.5
TTC39A-215ENST00000527205 HECW2Q9P2P5 1572 aa30.66■■■□□ 2.5
TTC39A-215ENST00000527205 KDM4FA0A1W2PPD8 638 aa30.65■■■□□ 2.5
TTC39A-215ENST00000527205 CFDP1Q9UEE9 299 aaPredicted RBP30.64■■■□□ 2.5
TTC39A-215ENST00000527205 AFAP1Q8N556 730 aa30.63■■■□□ 2.49
TTC39A-215ENST00000527205 MAGI2Q86UL8 1455 aa30.63■■■□□ 2.49
TTC39A-215ENST00000527205 ABCA6Q8N139 1617 aa30.61■■■□□ 2.49
TTC39A-215ENST00000527205 KIDINS220Q9ULH0 1771 aa30.61■■■□□ 2.49
TTC39A-215ENST00000527205 ZNF644Q9H582 1327 aaPredicted RBP30.59■■■□□ 2.49
TTC39A-215ENST00000527205 DIP2CQ9Y2E4 1556 aa30.58■■■□□ 2.49
TTC39A-215ENST00000527205 PLEKHH2Q8IVE3 1493 aa30.57■■■□□ 2.48
TTC39A-215ENST00000527205 BCORL1Q5H9F3 1711 aa30.56■■■□□ 2.48
TTC39A-215ENST00000527205 CAMSAP2Q08AD1 1489 aa30.56■■■□□ 2.48
TTC39A-215ENST00000527205 KIAA1107Q9UPP5 1409 aa30.56■■■□□ 2.48
TTC39A-215ENST00000527205 HNRNPMP52272 730 aaKnown RBP eCLIP30.55■■■□□ 2.48
TTC39A-215ENST00000527205 APLP2Q06481 763 aa30.55■■■□□ 2.48
TTC39A-215ENST00000527205 MLH3Q9UHC1 1453 aa30.54■■■□□ 2.48
TTC39A-215ENST00000527205 ADAMTSL3P82987 1691 aa30.52■■■□□ 2.48
TTC39A-215ENST00000527205 INO80Q9ULG1 1556 aaPredicted RBP30.52■■■□□ 2.48
TTC39A-215ENST00000527205 MBD5Q9P267 1494 aa30.51■■■□□ 2.48
TTC39A-215ENST00000527205 MYOM3Q5VTT5 1437 aa30.49■■■□□ 2.47
TTC39A-215ENST00000527205 ATP10AO60312 1499 aa30.49■■■□□ 2.47
TTC39A-215ENST00000527205 C9orf84Q5VXU9 1444 aa30.47■■■□□ 2.47
TTC39A-215ENST00000527205 ATP7AQ04656 1500 aa30.46■■■□□ 2.47
TTC39A-215ENST00000527205 AEBP2Q6ZN18 517 aaPredicted RBP30.45■■■□□ 2.47
TTC39A-215ENST00000527205 REREQ9P2R6 1566 aa30.45■■■□□ 2.46
TTC39A-215ENST00000527205 MADDQ8WXG6 1647 aa30.44■■■□□ 2.46
TTC39A-215ENST00000527205 ARHGEF5Q12774 1597 aa30.42■■■□□ 2.46
TTC39A-215ENST00000527205 MYT1LQ9UL68 1186 aa30.42■■■□□ 2.46
TTC39A-215ENST00000527205 PTPN23Q9H3S7 1636 aa30.41■■■□□ 2.46
TTC39A-215ENST00000527205 ARID4BQ4LE39 1312 aaPredicted RBP30.41■■■□□ 2.46
TTC39A-215ENST00000527205 MIA2Q96PC5 1412 aa30.4■■■□□ 2.46
TTC39A-215ENST00000527205 CCDC141Q6ZP82 1450 aa30.39■■■□□ 2.46
TTC39A-215ENST00000527205 SPAG9O60271 1321 aaKnown RBP30.39■■■□□ 2.46
TTC39A-215ENST00000527205 ADGBQ8N7X0 1667 aa30.39■■■□□ 2.45
TTC39A-215ENST00000527205 RIMS1Q86UR5 1692 aaKnown RBP30.38■■■□□ 2.45
TTC39A-215ENST00000527205 FER1L4A9Z1Z3 1794 aa30.37■■■□□ 2.45
TTC39A-215ENST00000527205 FGD6Q6ZV73 1430 aa30.33■■■□□ 2.45
TTC39A-215ENST00000527205 CROCC2H7BZ55 1655 aa30.33■■■□□ 2.45
TTC39A-215ENST00000527205 PLXNC1O60486 1568 aa30.32■■■□□ 2.45
TTC39A-215ENST00000527205 AGLP35573 1532 aa30.3■■■□□ 2.44
TTC39A-215ENST00000527205 TCOF1Q13428 1488 aaKnown RBP30.3■■■□□ 2.44
TTC39A-215ENST00000527205 MAST1Q9Y2H9 1570 aa30.28■■■□□ 2.44
TTC39A-215ENST00000527205 MLECQ14165 292 aa30.28■■■□□ 2.44
TTC39A-215ENST00000527205 RTEL1-TNFRSF6BF6WH68 1400 aa30.28■■■□□ 2.44
TTC39A-215ENST00000527205 PPARGC1BQ86YN6 1023 aaKnown RBP30.26■■■□□ 2.43
TTC39A-215ENST00000527205 DNMT1P26358 1616 aaKnown RBP30.25■■■□□ 2.43
TTC39A-215ENST00000527205 A2MP01023 1474 aa30.25■■■□□ 2.43
TTC39A-215ENST00000527205 PTPRMP28827 1452 aa30.25■■■□□ 2.43
TTC39A-215ENST00000527205 RSPH4AQ5TD94 716 aa30.2■■■□□ 2.43
TTC39A-215ENST00000527205 ABCC5O15440 1437 aa30.18■■■□□ 2.42
TTC39A-215ENST00000527205 DAPK1P53355 1430 aa30.16■■■□□ 2.42
TTC39A-215ENST00000527205 SHANK2Q9UPX8 1470 aa30.14■■■□□ 2.42
TTC39A-215ENST00000527205 TSPY4P0CV99 314 aa30.12■■■□□ 2.41
TTC39A-215ENST00000527205 TSPY10P0CW01 314 aa30.12■■■□□ 2.41
TTC39A-215ENST00000527205 DHX29Q7Z478 1369 aaKnown RBP30.11■■■□□ 2.41
TTC39A-215ENST00000527205 C3P01024 1663 aa30.1■■■□□ 2.41
TTC39A-215ENST00000527205 CLTCQ00610 1675 aaKnown RBP30.09■■■□□ 2.41
TTC39A-215ENST00000527205 FAM50AQ14320 339 aaKnown RBP30.05■■■□□ 2.4
TTC39A-215ENST00000527205 MROH2AA6NES4 1674 aa30.04■■■□□ 2.4
TTC39A-215ENST00000527205 PLPPR3Q6T4P5 718 aa30.04■■■□□ 2.4
TTC39A-215ENST00000527205 EIF2AK4Q9P2K8 1649 aaKnown RBP30.03■■■□□ 2.4
TTC39A-215ENST00000527205 RNF17Q9BXT8 1623 aaKnown RBP30■■■□□ 2.39
TTC39A-215ENST00000527205 DUOX2Q9NRD8 1548 aa30■■■□□ 2.39
TTC39A-215ENST00000527205 PTPRKQ15262 1439 aa29.97■■■□□ 2.39
TTC39A-215ENST00000527205 MROH1Q8NDA8 1641 aa29.97■■■□□ 2.39
TTC39A-215ENST00000527205 CEBPAP49715 358 aaPredicted RBP29.97■■■□□ 2.39
TTC39A-215ENST00000527205 GGT6Q6P531 493 aa29.97■■■□□ 2.39
TTC39A-215ENST00000527205 CHIC2Q9UKJ5 165 aa29.97■■■□□ 2.39
TTC39A-215ENST00000527205 ADGRL2O95490 1459 aa29.96■■■□□ 2.39
TTC39A-215ENST00000527205 KIF15Q9NS87 1388 aa29.96■■■□□ 2.39
TTC39A-215ENST00000527205 KIF3BO15066 747 aa29.95■■■□□ 2.39
TTC39A-215ENST00000527205 CNTLNQ9NXG0 1405 aa29.95■■■□□ 2.38
TTC39A-215ENST00000527205 PREX1Q8TCU6 1659 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms