RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 SCAPERQ9BY12 1400 aa21.67■■□□□ 1.06
CAPN1-207ENST00000527189 ZMYM4Q5VZL5 1548 aa21.65■■□□□ 1.06
CAPN1-207ENST00000527189 FYCO1Q9BQS8 1478 aa21.65■■□□□ 1.06
CAPN1-207ENST00000527189 LRRIQ1Q96JM4 1722 aa21.65■■□□□ 1.06
CAPN1-207ENST00000527189 MYO5CQ9NQX4 1742 aa21.65■■□□□ 1.06
CAPN1-207ENST00000527189 ARID4BQ4LE39 1312 aaPredicted RBP21.64■■□□□ 1.05
CAPN1-207ENST00000527189 ILDR2Q71H61 639 aa21.64■■□□□ 1.05
CAPN1-207ENST00000527189 MADDQ8WXG6 1647 aa21.64■■□□□ 1.05
CAPN1-207ENST00000527189 BCORL1Q5H9F3 1711 aa21.63■■□□□ 1.05
CAPN1-207ENST00000527189 ARHGEF40Q8TER5 1519 aa21.63■■□□□ 1.05
CAPN1-207ENST00000527189 POGZQ7Z3K3 1410 aa21.63■■□□□ 1.05
CAPN1-207ENST00000527189 ARHGAP5Q13017 1502 aa21.59■■□□□ 1.05
CAPN1-207ENST00000527189 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
CAPN1-207ENST00000527189 SOCS7O14512 581 aa21.58■■□□□ 1.05
CAPN1-207ENST00000527189 YEATS2Q9ULM3 1422 aa21.56■■□□□ 1.04
CAPN1-207ENST00000527189 ZNF518AQ6AHZ1 1483 aa21.55■■□□□ 1.04
CAPN1-207ENST00000527189 RIMS1Q86UR5 1692 aaKnown RBP21.53■■□□□ 1.04
CAPN1-207ENST00000527189 ATP10AO60312 1499 aa21.52■■□□□ 1.04
CAPN1-207ENST00000527189 AFAP1Q8N556 730 aa21.52■■□□□ 1.04
CAPN1-207ENST00000527189 CDC42BPBQ9Y5S2 1711 aa21.52■■□□□ 1.03
CAPN1-207ENST00000527189 DISP3Q9P2K9 1392 aa21.51■■□□□ 1.03
CAPN1-207ENST00000527189 PREX2Q70Z35 1606 aa21.5■■□□□ 1.03
CAPN1-207ENST00000527189 CEP162Q5TB80 1403 aa21.49■■□□□ 1.03
CAPN1-207ENST00000527189 KDM5CP41229 1560 aa21.48■■□□□ 1.03
CAPN1-207ENST00000527189 CERKQ8TCT0 537 aa21.48■■□□□ 1.03
CAPN1-207ENST00000527189 C9orf84Q5VXU9 1444 aa21.47■■□□□ 1.03
CAPN1-207ENST00000527189 HSPA2P54652 639 aa21.46■■□□□ 1.03
CAPN1-207ENST00000527189 MLH3Q9UHC1 1453 aa21.45■■□□□ 1.03
CAPN1-207ENST00000527189 MTUS2Q5JR59 1369 aa21.45■■□□□ 1.02
CAPN1-207ENST00000527189 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
CAPN1-207ENST00000527189 CDC42BPAQ5VT25 1732 aa21.44■■□□□ 1.02
CAPN1-207ENST00000527189 MYT1LQ9UL68 1186 aa21.44■■□□□ 1.02
CAPN1-207ENST00000527189 ABCC1P33527 1531 aa21.44■■□□□ 1.02
CAPN1-207ENST00000527189 ARHGEF12Q9NZN5 1544 aa21.43■■□□□ 1.02
CAPN1-207ENST00000527189 MLECQ14165 292 aa21.42■■□□□ 1.02
CAPN1-207ENST00000527189 SPATA31D1Q6ZQQ2 1576 aa21.42■■□□□ 1.02
CAPN1-207ENST00000527189 SIGLEC1Q9BZZ2 1709 aa21.42■■□□□ 1.02
CAPN1-207ENST00000527189 TRAPPC8Q9Y2L5 1435 aa21.42■■□□□ 1.02
CAPN1-207ENST00000527189 CFDP1Q9UEE9 299 aaPredicted RBP21.41■■□□□ 1.02
CAPN1-207ENST00000527189 CCNB3Q8WWL7 1395 aa21.4■■□□□ 1.02
CAPN1-207ENST00000527189 ZNF777Q9ULD5 760 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-207ENST00000527189 REREQ9P2R6 1566 aa21.39■■□□□ 1.01
CAPN1-207ENST00000527189 KIAA1107Q9UPP5 1409 aa21.38■■□□□ 1.01
CAPN1-207ENST00000527189 PLEKHH2Q8IVE3 1493 aa21.38■■□□□ 1.01
CAPN1-207ENST00000527189 ITSN2Q9NZM3 1697 aa21.37■■□□□ 1.01
CAPN1-207ENST00000527189 LOC105371045A0A1W2PR82 267 aa21.37■■□□□ 1.01
CAPN1-207ENST00000527189 DIP2CQ9Y2E4 1556 aa21.36■■□□□ 1.01
CAPN1-207ENST00000527189 SAMD9LQ8IVG5 1584 aa21.35■■□□□ 1.01
CAPN1-207ENST00000527189 EHBP1L1Q8N3D4 1523 aa21.34■■□□□ 1.01
CAPN1-207ENST00000527189 HNRNPMP52272 730 aaKnown RBP eCLIP21.34■■□□□ 1.01
CAPN1-207ENST00000527189 AGLP35573 1532 aa21.33■■□□□ 1
CAPN1-207ENST00000527189 FER1L4A9Z1Z3 1794 aa21.33■■□□□ 1
CAPN1-207ENST00000527189 SPAG9O60271 1321 aaKnown RBP21.31■■□□□ 1
CAPN1-207ENST00000527189 ABCA6Q8N139 1617 aa21.31■■□□□ 1
CAPN1-207ENST00000527189 KIDINS220Q9ULH0 1771 aa21.31■■□□□ 1
CAPN1-207ENST00000527189 SYCP2Q9BX26 1530 aa21.3■■□□□ 1
CAPN1-207ENST00000527189 VPS8Q8N3P4 1428 aa21.29■■□□□ 1
CAPN1-207ENST00000527189 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
CAPN1-207ENST00000527189 STRCQ7RTU9 1775 aa21.28■■□□□ 1
CAPN1-207ENST00000527189 TIAM1Q13009 1591 aa21.27■□□□□ 0.99
CAPN1-207ENST00000527189 ESF1Q9H501 851 aaKnown RBP21.26■□□□□ 0.99
CAPN1-207ENST00000527189 PREX1Q8TCU6 1659 aa21.25■□□□□ 0.99
CAPN1-207ENST00000527189 RSPH4AQ5TD94 716 aa21.24■□□□□ 0.99
CAPN1-207ENST00000527189 CEBPAP49715 358 aaPredicted RBP21.23■□□□□ 0.99
CAPN1-207ENST00000527189 ZNF644Q9H582 1327 aaPredicted RBP21.23■□□□□ 0.99
CAPN1-207ENST00000527189 NCOA2Q15596 1464 aa21.22■□□□□ 0.99
CAPN1-207ENST00000527189 MBD5Q9P267 1494 aa21.22■□□□□ 0.99
CAPN1-207ENST00000527189 ATP7AQ04656 1500 aa21.22■□□□□ 0.99
CAPN1-207ENST00000527189 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
CAPN1-207ENST00000527189 CNTLNQ9NXG0 1405 aa21.21■□□□□ 0.99
CAPN1-207ENST00000527189 MAP3K1Q13233 1512 aa21.2■□□□□ 0.98
CAPN1-207ENST00000527189 RTEL1-TNFRSF6BF6WH68 1400 aa21.2■□□□□ 0.98
CAPN1-207ENST00000527189 SETD1BQ9UPS6 1966 aaKnown RBP21.19■□□□□ 0.98
CAPN1-207ENST00000527189 INO80Q9ULG1 1556 aaPredicted RBP21.19■□□□□ 0.98
CAPN1-207ENST00000527189 A2MP01023 1474 aa21.18■□□□□ 0.98
CAPN1-207ENST00000527189 LRRC9Q6ZRR7 1453 aa21.18■□□□□ 0.98
CAPN1-207ENST00000527189 PPP6R1Q9UPN7 881 aa21.17■□□□□ 0.98
CAPN1-207ENST00000527189 PLXNC1O60486 1568 aa21.14■□□□□ 0.97
CAPN1-207ENST00000527189 UHRF1BP1Q6BDS2 1440 aa21.12■□□□□ 0.97
CAPN1-207ENST00000527189 CAMSAP2Q08AD1 1489 aa21.12■□□□□ 0.97
CAPN1-207ENST00000527189 CCDC141Q6ZP82 1450 aa21.12■□□□□ 0.97
CAPN1-207ENST00000527189 KANK4Q5T7N3 995 aaPredicted RBP21.11■□□□□ 0.97
CAPN1-207ENST00000527189 C3P01024 1663 aa21.11■□□□□ 0.97
CAPN1-207ENST00000527189 ADGBQ8N7X0 1667 aa21.11■□□□□ 0.97
CAPN1-207ENST00000527189 ZMYM3Q14202 1370 aa21.1■□□□□ 0.97
CAPN1-207ENST00000527189 DHX29Q7Z478 1369 aaKnown RBP21.1■□□□□ 0.97
CAPN1-207ENST00000527189 TSPY4P0CV99 314 aa21.1■□□□□ 0.97
CAPN1-207ENST00000527189 TSPY10P0CW01 314 aa21.1■□□□□ 0.97
CAPN1-207ENST00000527189 APLP2Q06481 763 aa21.09■□□□□ 0.97
CAPN1-207ENST00000527189 GGT6Q6P531 493 aa21.09■□□□□ 0.97
CAPN1-207ENST00000527189 NPATQ14207 1427 aa21.08■□□□□ 0.97
CAPN1-207ENST00000527189 DMRT2Q9Y5R5 561 aa21.08■□□□□ 0.97
CAPN1-207ENST00000527189 MROH2AA6NES4 1674 aa21.08■□□□□ 0.96
CAPN1-207ENST00000527189 LTBP4Q8N2S1 1624 aa21.07■□□□□ 0.96
CAPN1-207ENST00000527189 MIA2Q96PC5 1412 aa21.07■□□□□ 0.96
CAPN1-207ENST00000527189 ARHGEF5Q12774 1597 aa21.06■□□□□ 0.96
CAPN1-207ENST00000527189 MYOM3Q5VTT5 1437 aa21.04■□□□□ 0.96
CAPN1-207ENST00000527189 KIF3BO15066 747 aa21.01■□□□□ 0.95
CAPN1-207ENST00000527189 PTPRTO14522 1441 aa21■□□□□ 0.95
CAPN1-207ENST00000527189 IQSEC2Q5JU85 1478 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms