RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 ROCK1Q13464 1354 aa12.92□□□□□ -0.34
SCN3B-203ENST00000527125 ANKRD30BQ9BXX2 1392 aa12.92□□□□□ -0.34
SCN3B-203ENST00000527125 KDM5CP41229 1560 aa12.92□□□□□ -0.34
SCN3B-203ENST00000527125 PPP4R2Q9NY27 417 aa12.91□□□□□ -0.34
SCN3B-203ENST00000527125 EPRSP07814 1512 aaKnown RBP12.91□□□□□ -0.34
SCN3B-203ENST00000527125 KIF14Q15058 1648 aa12.91□□□□□ -0.34
SCN3B-203ENST00000527125 MTUS2Q5JR59 1369 aa12.91□□□□□ -0.34
SCN3B-203ENST00000527125 DHX29Q7Z478 1369 aaKnown RBP12.9□□□□□ -0.34
SCN3B-203ENST00000527125 SMG6Q86US8 1419 aaKnown RBP12.9□□□□□ -0.34
SCN3B-203ENST00000527125 PRKRIP1Q9H875 184 aaPredicted RBP12.89□□□□□ -0.35
SCN3B-203ENST00000527125 ADAMTS12P58397 1594 aa12.88□□□□□ -0.35
SCN3B-203ENST00000527125 P3H3Q8IVL6 736 aa12.88□□□□□ -0.35
SCN3B-203ENST00000527125 ADCY10Q96PN6 1610 aa12.88□□□□□ -0.35
SCN3B-203ENST00000527125 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
SCN3B-203ENST00000527125 IQGAP2Q13576 1575 aa12.87□□□□□ -0.35
SCN3B-203ENST00000527125 HNRNPUQ00839 825 aaKnown RBP eCLIP12.87□□□□□ -0.35
SCN3B-203ENST00000527125 PZPP20742 1482 aa12.86□□□□□ -0.35
SCN3B-203ENST00000527125 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
SCN3B-203ENST00000527125 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
SCN3B-203ENST00000527125 DAPK1P53355 1430 aa12.84□□□□□ -0.35
SCN3B-203ENST00000527125 CDK13Q14004 1512 aaKnown RBP12.83□□□□□ -0.36
SCN3B-203ENST00000527125 NBPF8Q3BBV2 869 aa12.82□□□□□ -0.36
SCN3B-203ENST00000527125 ABCC5O15440 1437 aa12.82□□□□□ -0.36
SCN3B-203ENST00000527125 EIF4G2P78344 907 aaKnown RBP eCLIP12.82□□□□□ -0.36
SCN3B-203ENST00000527125 ADGRL2O95490 1459 aa12.82□□□□□ -0.36
SCN3B-203ENST00000527125 UHRF1BP1Q6BDS2 1440 aa12.81□□□□□ -0.36
SCN3B-203ENST00000527125 KIF7Q2M1P5 1343 aa12.8□□□□□ -0.36
SCN3B-203ENST00000527125 L3MBTL2Q969R5 705 aa12.8□□□□□ -0.36
SCN3B-203ENST00000527125 MPHOSPH9Q99550 1183 aa12.8□□□□□ -0.36
SCN3B-203ENST00000527125 ITSN2Q9NZM3 1697 aa12.8□□□□□ -0.36
SCN3B-203ENST00000527125 KIAA0556O60303 1618 aa12.8□□□□□ -0.36
SCN3B-203ENST00000527125 KDM5DQ9BY66 1539 aa12.8□□□□□ -0.36
SCN3B-203ENST00000527125 IRX6P78412 446 aaPredicted RBP12.79□□□□□ -0.36
SCN3B-203ENST00000527125 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
SCN3B-203ENST00000527125 RAPGEF6Q8TEU7 1601 aa12.77□□□□□ -0.37
SCN3B-203ENST00000527125 CDC42BPAQ5VT25 1732 aa12.77□□□□□ -0.37
SCN3B-203ENST00000527125 DISP1Q96F81 1524 aa12.77□□□□□ -0.37
SCN3B-203ENST00000527125 CEP170Q5SW79 1584 aa12.76□□□□□ -0.37
SCN3B-203ENST00000527125 ARHGEF12Q9NZN5 1544 aa12.76□□□□□ -0.37
SCN3B-203ENST00000527125 ARID4BQ4LE39 1312 aaPredicted RBP12.75□□□□□ -0.37
SCN3B-203ENST00000527125 NUP153P49790 1475 aaKnown RBP12.75□□□□□ -0.37
SCN3B-203ENST00000527125 RALGAPBQ86X10 1494 aa12.75□□□□□ -0.37
SCN3B-203ENST00000527125 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
SCN3B-203ENST00000527125 ZMYM4Q5VZL5 1548 aa12.73□□□□□ -0.37
SCN3B-203ENST00000527125 TDRD9Q8NDG6 1382 aaKnown RBP12.73□□□□□ -0.37
SCN3B-203ENST00000527125 LAMC1P11047 1609 aa12.73□□□□□ -0.37
SCN3B-203ENST00000527125 B4GALNT3Q6L9W6 998 aa12.72□□□□□ -0.37
SCN3B-203ENST00000527125 RRP7BPQ9NSQ0 103 aa12.72□□□□□ -0.37
SCN3B-203ENST00000527125 PAK3O75914 559 aaPredicted RBP12.72□□□□□ -0.37
SCN3B-203ENST00000527125 TRPM1Q7Z4N2 1603 aa12.7□□□□□ -0.38
SCN3B-203ENST00000527125 NUDCQ9Y266 331 aa12.7□□□□□ -0.38
SCN3B-203ENST00000527125 DEKP35659 375 aaKnown RBP12.7□□□□□ -0.38
SCN3B-203ENST00000527125 KIAA1107Q9UPP5 1409 aa12.69□□□□□ -0.38
SCN3B-203ENST00000527125 NOP58Q9Y2X3 529 aaKnown RBP12.69□□□□□ -0.38
SCN3B-203ENST00000527125 CAMSAP2Q08AD1 1489 aa12.69□□□□□ -0.38
SCN3B-203ENST00000527125 MRS2Q9HD23 443 aa12.68□□□□□ -0.38
SCN3B-203ENST00000527125 ATP1B4Q9UN42 357 aaPredicted RBP12.68□□□□□ -0.38
SCN3B-203ENST00000527125 PTPRGP23470 1445 aa12.68□□□□□ -0.38
SCN3B-203ENST00000527125 INSRP06213 1382 aa12.67□□□□□ -0.38
SCN3B-203ENST00000527125 SHANK2Q9UPX8 1470 aa12.67□□□□□ -0.38
SCN3B-203ENST00000527125 PNISRQ8TF01 805 aaKnown RBP12.67□□□□□ -0.38
SCN3B-203ENST00000527125 KTN1Q86UP2 1357 aaKnown RBP12.66□□□□□ -0.38
SCN3B-203ENST00000527125 KIAA0586Q9BVV6 1533 aa12.65□□□□□ -0.38
SCN3B-203ENST00000527125 GPATCH8Q9UKJ3 1502 aaKnown RBP12.65□□□□□ -0.38
SCN3B-203ENST00000527125 ZNF608Q9ULD9 1512 aaPredicted RBP12.65□□□□□ -0.39
SCN3B-203ENST00000527125 FOXD1Q16676 465 aa12.64□□□□□ -0.39
SCN3B-203ENST00000527125 IPO9Q96P70 1041 aaKnown RBP12.64□□□□□ -0.39
SCN3B-203ENST00000527125 ROCK2O75116 1388 aaKnown RBP12.64□□□□□ -0.39
SCN3B-203ENST00000527125 USP47Q96K76 1375 aa12.64□□□□□ -0.39
SCN3B-203ENST00000527125 PDS5BQ9NTI5 1447 aa12.64□□□□□ -0.39
SCN3B-203ENST00000527125 FAM9BQ8IZU0 186 aa12.64□□□□□ -0.39
SCN3B-203ENST00000527125 AEBP2Q6ZN18 517 aaPredicted RBP12.63□□□□□ -0.39
SCN3B-203ENST00000527125 CHIC2Q9UKJ5 165 aa12.63□□□□□ -0.39
SCN3B-203ENST00000527125 VIRMAQ69YN4 1812 aaKnown RBP12.62□□□□□ -0.39
SCN3B-203ENST00000527125 MYO5CQ9NQX4 1742 aa12.62□□□□□ -0.39
SCN3B-203ENST00000527125 ARHGEF5Q12774 1597 aa12.62□□□□□ -0.39
SCN3B-203ENST00000527125 BRD4O60885 1362 aaPredicted RBP12.61□□□□□ -0.39
SCN3B-203ENST00000527125 ABCC10Q5T3U5 1492 aa12.61□□□□□ -0.39
SCN3B-203ENST00000527125 EIF4G3O43432 1585 aaKnown RBP12.61□□□□□ -0.39
SCN3B-203ENST00000527125 TROQ12816 1431 aaPredicted RBP12.61□□□□□ -0.39
SCN3B-203ENST00000527125 RNF17Q9BXT8 1623 aaKnown RBP12.6□□□□□ -0.39
SCN3B-203ENST00000527125 ABCA8O94911 1581 aa12.6□□□□□ -0.39
SCN3B-203ENST00000527125 BLMP54132 1417 aaPredicted RBP12.59□□□□□ -0.39
SCN3B-203ENST00000527125 PARD3Q8TEW0 1356 aa12.59□□□□□ -0.39
SCN3B-203ENST00000527125 PRDM15P57071 1507 aaPredicted RBP12.59□□□□□ -0.39
SCN3B-203ENST00000527125 UNC13BO14795 1591 aa12.58□□□□□ -0.39
SCN3B-203ENST00000527125 ZNF644Q9H582 1327 aaPredicted RBP12.58□□□□□ -0.4
SCN3B-203ENST00000527125 KIF15Q9NS87 1388 aa12.57□□□□□ -0.4
SCN3B-203ENST00000527125 ERICH6Q7L0X2 663 aa12.56□□□□□ -0.4
SCN3B-203ENST00000527125 WASHC2CQ9Y4E1 1318 aa12.56□□□□□ -0.4
SCN3B-203ENST00000527125 MAST1Q9Y2H9 1570 aa12.55□□□□□ -0.4
SCN3B-203ENST00000527125 GPRASP1Q5JY77 1395 aa12.54□□□□□ -0.4
SCN3B-203ENST00000527125 CDC42BPBQ9Y5S2 1711 aa12.54□□□□□ -0.4
SCN3B-203ENST00000527125 GRIN2AQ12879 1464 aa12.54□□□□□ -0.4
SCN3B-203ENST00000527125 CLASP1Q7Z460 1538 aa12.54□□□□□ -0.4
SCN3B-203ENST00000527125 PRG4Q92954 1404 aaPredicted RBP12.54□□□□□ -0.4
SCN3B-203ENST00000527125 MRC2Q9UBG0 1479 aa12.54□□□□□ -0.4
SCN3B-203ENST00000527125 SYNJ2O15056 1496 aa12.53□□□□□ -0.4
SCN3B-203ENST00000527125 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.4
SCN3B-203ENST00000527125 COL17A1Q9UMD9 1497 aaPredicted RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms