RNA–Protein interactions for RNA: ENST00000527028.5

PDZD3-206, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,522 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-206ENST00000527028 TEX14Q8IWB6 1497 aa25.49■■□□□ 1.67
PDZD3-206ENST00000527028 CHIC2Q9UKJ5 165 aa25.48■■□□□ 1.67
PDZD3-206ENST00000527028 IQGAP2Q13576 1575 aa25.48■■□□□ 1.67
PDZD3-206ENST00000527028 WDR62O43379 1518 aa25.47■■□□□ 1.67
PDZD3-206ENST00000527028 TARBP1Q13395 1621 aaKnown RBP25.47■■□□□ 1.67
PDZD3-206ENST00000527028 ANKRD30BQ9BXX2 1392 aa25.47■■□□□ 1.67
PDZD3-206ENST00000527028 SPATA31E1Q6ZUB1 1445 aa25.46■■□□□ 1.67
PDZD3-206ENST00000527028 CCDC184Q52MB2 194 aa25.45■■□□□ 1.66
PDZD3-206ENST00000527028 DNMT1P26358 1616 aaKnown RBP25.44■■□□□ 1.66
PDZD3-206ENST00000527028 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
PDZD3-206ENST00000527028 PBRM1Q86U86 1689 aa25.43■■□□□ 1.66
PDZD3-206ENST00000527028 C11orf95C9JLR9 678 aaPredicted RBP25.42■■□□□ 1.66
PDZD3-206ENST00000527028 ERICH6Q7L0X2 663 aa25.42■■□□□ 1.66
PDZD3-206ENST00000527028 MRS2Q9HD23 443 aa25.42■■□□□ 1.66
PDZD3-206ENST00000527028 MYT1LQ9UL68 1186 aa25.41■■□□□ 1.66
PDZD3-206ENST00000527028 DAPK1P53355 1430 aa25.41■■□□□ 1.66
PDZD3-206ENST00000527028 CDK13Q14004 1512 aaKnown RBP25.4■■□□□ 1.66
PDZD3-206ENST00000527028 FAM9BQ8IZU0 186 aa25.36■■□□□ 1.65
PDZD3-206ENST00000527028 ADAMTS12P58397 1594 aa25.36■■□□□ 1.65
PDZD3-206ENST00000527028 KIF7Q2M1P5 1343 aa25.36■■□□□ 1.65
PDZD3-206ENST00000527028 NBPF8Q3BBV2 869 aa25.35■■□□□ 1.65
PDZD3-206ENST00000527028 ABCC5O15440 1437 aa25.33■■□□□ 1.65
PDZD3-206ENST00000527028 SMG6Q86US8 1419 aaKnown RBP25.32■■□□□ 1.64
PDZD3-206ENST00000527028 FOXD1Q16676 465 aa25.29■■□□□ 1.64
PDZD3-206ENST00000527028 MBD5Q9P267 1494 aa25.29■■□□□ 1.64
PDZD3-206ENST00000527028 B4GALNT3Q6L9W6 998 aa25.27■■□□□ 1.64
PDZD3-206ENST00000527028 DHX29Q7Z478 1369 aaKnown RBP25.25■■□□□ 1.63
PDZD3-206ENST00000527028 ARID4BQ4LE39 1312 aaPredicted RBP25.24■■□□□ 1.63
PDZD3-206ENST00000527028 RNF123Q5XPI4 1314 aa25.24■■□□□ 1.63
PDZD3-206ENST00000527028 ADGBQ8N7X0 1667 aa25.23■■□□□ 1.63
PDZD3-206ENST00000527028 KIF14Q15058 1648 aa25.23■■□□□ 1.63
PDZD3-206ENST00000527028 PZPP20742 1482 aa25.23■■□□□ 1.63
PDZD3-206ENST00000527028 SLC4A1APQ9BWU0 796 aaKnown RBP25.23■■□□□ 1.63
PDZD3-206ENST00000527028 KIAA0556O60303 1618 aa25.2■■□□□ 1.62
PDZD3-206ENST00000527028 NUDCQ9Y266 331 aa25.19■■□□□ 1.62
PDZD3-206ENST00000527028 BCORL1Q5H9F3 1711 aa25.18■■□□□ 1.62
PDZD3-206ENST00000527028 ITSN2Q9NZM3 1697 aa25.18■■□□□ 1.62
PDZD3-206ENST00000527028 RAPGEF6Q8TEU7 1601 aa25.18■■□□□ 1.62
PDZD3-206ENST00000527028 NUP153P49790 1475 aaKnown RBP25.18■■□□□ 1.62
PDZD3-206ENST00000527028 KDM5CP41229 1560 aa25.17■■□□□ 1.62
PDZD3-206ENST00000527028 ADGRL2O95490 1459 aa25.16■■□□□ 1.62
PDZD3-206ENST00000527028 KIAA1107Q9UPP5 1409 aa25.15■■□□□ 1.62
PDZD3-206ENST00000527028 ROCK2O75116 1388 aaKnown RBP25.14■■□□□ 1.62
PDZD3-206ENST00000527028 USP47Q96K76 1375 aa25.14■■□□□ 1.62
PDZD3-206ENST00000527028 CROCC2H7BZ55 1655 aa25.14■■□□□ 1.62
PDZD3-206ENST00000527028 DISP1Q96F81 1524 aa25.14■■□□□ 1.61
PDZD3-206ENST00000527028 KIAA0586Q9BVV6 1533 aa25.13■■□□□ 1.61
PDZD3-206ENST00000527028 NOP58Q9Y2X3 529 aaKnown RBP25.12■■□□□ 1.61
PDZD3-206ENST00000527028 CAMSAP2Q08AD1 1489 aa25.12■■□□□ 1.61
PDZD3-206ENST00000527028 UHRF1BP1Q6BDS2 1440 aa25.1■■□□□ 1.61
PDZD3-206ENST00000527028 ZNF644Q9H582 1327 aaPredicted RBP25.09■■□□□ 1.61
PDZD3-206ENST00000527028 ADCY10Q96PN6 1610 aa25.09■■□□□ 1.61
PDZD3-206ENST00000527028 TROQ12816 1431 aaPredicted RBP25.07■■□□□ 1.6
PDZD3-206ENST00000527028 RALGAPBQ86X10 1494 aa25.07■■□□□ 1.6
PDZD3-206ENST00000527028 ARHGEF12Q9NZN5 1544 aa25.06■■□□□ 1.6
PDZD3-206ENST00000527028 KTN1Q86UP2 1357 aaKnown RBP25.05■■□□□ 1.6
PDZD3-206ENST00000527028 CCDC136Q96JN2 1154 aa25.04■■□□□ 1.6
PDZD3-206ENST00000527028 ARID3CA6NKF2 412 aa25.03■■□□□ 1.6
PDZD3-206ENST00000527028 PNISRQ8TF01 805 aaKnown RBP25.03■■□□□ 1.6
PDZD3-206ENST00000527028 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
PDZD3-206ENST00000527028 GPATCH8Q9UKJ3 1502 aaKnown RBP25.01■■□□□ 1.59
PDZD3-206ENST00000527028 LRPPRCP42704 1394 aaKnown RBP25■■□□□ 1.59
PDZD3-206ENST00000527028 KIF15Q9NS87 1388 aa24.99■■□□□ 1.59
PDZD3-206ENST00000527028 ANKRD30AQ9BXX3 1397 aa24.99■■□□□ 1.59
PDZD3-206ENST00000527028 DEKP35659 375 aaKnown RBP24.99■■□□□ 1.59
PDZD3-206ENST00000527028 IFT140Q96RY7 1462 aa24.98■■□□□ 1.59
PDZD3-206ENST00000527028 ANP32AP39687 249 aaKnown RBP24.97■■□□□ 1.59
PDZD3-206ENST00000527028 CFDP1Q9UEE9 299 aaPredicted RBP24.97■■□□□ 1.59
PDZD3-206ENST00000527028 E9PCH4 1651 aa24.97■■□□□ 1.59
PDZD3-206ENST00000527028 KDM5DQ9BY66 1539 aa24.97■■□□□ 1.59
PDZD3-206ENST00000527028 BRD4O60885 1362 aaPredicted RBP24.97■■□□□ 1.59
PDZD3-206ENST00000527028 IPO9Q96P70 1041 aaKnown RBP24.96■■□□□ 1.59
PDZD3-206ENST00000527028 SHANK2Q9UPX8 1470 aa24.96■■□□□ 1.59
PDZD3-206ENST00000527028 PRG4Q92954 1404 aaPredicted RBP24.96■■□□□ 1.59
PDZD3-206ENST00000527028 PKD2Q13563 968 aa24.95■■□□□ 1.58
PDZD3-206ENST00000527028 ANKRD50Q9ULJ7 1429 aa24.94■■□□□ 1.58
PDZD3-206ENST00000527028 TMC1Q8TDI8 760 aa24.94■■□□□ 1.58
PDZD3-206ENST00000527028 GRIN2AQ12879 1464 aa24.93■■□□□ 1.58
PDZD3-206ENST00000527028 PAK3O75914 559 aaPredicted RBP24.92■■□□□ 1.58
PDZD3-206ENST00000527028 RALBP1Q15311 655 aa24.91■■□□□ 1.58
PDZD3-206ENST00000527028 MYBBP1AQ9BQG0 1328 aaKnown RBP24.9■■□□□ 1.58
PDZD3-206ENST00000527028 CEP170Q5SW79 1584 aa24.89■■□□□ 1.58
PDZD3-206ENST00000527028 ZNF326Q5BKZ1 582 aaKnown RBP24.88■■□□□ 1.57
PDZD3-206ENST00000527028 POLR3GLQ9BT43 218 aa24.87■■□□□ 1.57
PDZD3-206ENST00000527028 CDC42BPAQ5VT25 1732 aa24.87■■□□□ 1.57
PDZD3-206ENST00000527028 ZNF608Q9ULD9 1512 aaPredicted RBP24.87■■□□□ 1.57
PDZD3-206ENST00000527028 CARD11Q9BXL7 1154 aa24.86■■□□□ 1.57
PDZD3-206ENST00000527028 ERCC6Q03468 1493 aa24.86■■□□□ 1.57
PDZD3-206ENST00000527028 ZBTB47Q9UFB7 747 aaPredicted RBP24.83■■□□□ 1.57
PDZD3-206ENST00000527028 PTPRGP23470 1445 aa24.83■■□□□ 1.57
PDZD3-206ENST00000527028 RRP1P56182 461 aaKnown RBP24.82■■□□□ 1.56
PDZD3-206ENST00000527028 PLB1Q6P1J6 1458 aa24.82■■□□□ 1.56
PDZD3-206ENST00000527028 C9orf84Q5VXU9 1444 aa24.81■■□□□ 1.56
PDZD3-206ENST00000527028 NUP155O75694 1391 aa24.81■■□□□ 1.56
PDZD3-206ENST00000527028 PDE3BQ13370 1112 aa24.81■■□□□ 1.56
PDZD3-206ENST00000527028 NBR1Q14596 966 aa24.8■■□□□ 1.56
PDZD3-206ENST00000527028 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
PDZD3-206ENST00000527028 ZMYM4Q5VZL5 1548 aa24.79■■□□□ 1.56
PDZD3-206ENST00000527028 TCERG1O14776 1098 aaKnown RBP24.79■■□□□ 1.56
PDZD3-206ENST00000527028 INSRP06213 1382 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms