RNA–Protein interactions for RNA: ENST00000526845.1

TRIM3-204, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 658 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-204ENST00000526845 C7P10643 843 aa7.65□□□□□ -1.18
TRIM3-204ENST00000526845 PLCG2P16885 1265 aa7.65□□□□□ -1.18
TRIM3-204ENST00000526845 SOX12O15370 315 aa7.64□□□□□ -1.19
TRIM3-204ENST00000526845 WDR70Q9NW82 654 aa7.64□□□□□ -1.19
TRIM3-204ENST00000526845 NLRP6P59044 892 aa7.63□□□□□ -1.19
TRIM3-204ENST00000526845 DPY19L2Q6NUT2 758 aa7.63□□□□□ -1.19
TRIM3-204ENST00000526845 ILDR1Q86SU0 546 aaPredicted RBP7.63□□□□□ -1.19
TRIM3-204ENST00000526845 SCUBE2Q9NQ36 999 aa7.63□□□□□ -1.19
TRIM3-204ENST00000526845 OCEL1Q9H607 264 aa7.62□□□□□ -1.19
TRIM3-204ENST00000526845 SPNS2Q8IVW8 549 aa7.61□□□□□ -1.19
TRIM3-204ENST00000526845 PPP1R37O75864 691 aa7.6□□□□□ -1.19
TRIM3-204ENST00000526845 TULP1O00294 542 aaPredicted RBP7.57□□□□□ -1.2
TRIM3-204ENST00000526845 ERICH6Q7L0X2 663 aa7.55□□□□□ -1.2
TRIM3-204ENST00000526845 MICALL2Q8IY33 904 aa7.54□□□□□ -1.2
TRIM3-204ENST00000526845 BOLA1Q9Y3E2 137 aa7.54□□□□□ -1.2
TRIM3-204ENST00000526845 G3V3G9 751 aa7.51□□□□□ -1.21
TRIM3-204ENST00000526845 L3MBTL3Q96JM7 780 aaPredicted RBP7.5□□□□□ -1.21
TRIM3-204ENST00000526845 TMEM132AQ24JP5 1023 aa7.49□□□□□ -1.21
TRIM3-204ENST00000526845 C3orf67Q6ZVT6 689 aa7.49□□□□□ -1.21
TRIM3-204ENST00000526845 CADPS2Q86UW7 1296 aa7.49□□□□□ -1.21
TRIM3-204ENST00000526845 KCNV2Q8TDN2 545 aa7.49□□□□□ -1.21
TRIM3-204ENST00000526845 TMEM121BQ9BXQ6 578 aaPredicted RBP7.49□□□□□ -1.21
TRIM3-204ENST00000526845 ARHGEF1Q92888 912 aaKnown RBP7.48□□□□□ -1.21
TRIM3-204ENST00000526845 LMOD2Q6P5Q4 547 aa7.47□□□□□ -1.21
TRIM3-204ENST00000526845 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.47□□□□□ -1.21
TRIM3-204ENST00000526845 GTF3C3Q9Y5Q9 886 aa7.47□□□□□ -1.21
TRIM3-204ENST00000526845 E2F4Q16254 413 aa7.45□□□□□ -1.22
TRIM3-204ENST00000526845 TMEM92Q6UXU6 159 aa7.45□□□□□ -1.22
TRIM3-204ENST00000526845 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.44□□□□□ -1.22
TRIM3-204ENST00000526845 NCKAP5LQ9HCH0 1330 aa7.43□□□□□ -1.22
TRIM3-204ENST00000526845 ST18O60284 1047 aa7.41□□□□□ -1.22
TRIM3-204ENST00000526845 SMYD5Q6GMV2 418 aa7.41□□□□□ -1.22
TRIM3-204ENST00000526845 SLAIN1Q8ND83 568 aa7.41□□□□□ -1.22
TRIM3-204ENST00000526845 C2orf72A6NCS6 295 aa7.4□□□□□ -1.22
TRIM3-204ENST00000526845 PDE4AP27815 886 aa7.4□□□□□ -1.22
TRIM3-204ENST00000526845 TMC2Q8TDI7 906 aa7.39□□□□□ -1.23
TRIM3-204ENST00000526845 CRISPLD2Q9H0B8 497 aa7.39□□□□□ -1.23
TRIM3-204ENST00000526845 KIF3CO14782 793 aa7.38□□□□□ -1.23
TRIM3-204ENST00000526845 LARP6Q9BRS8 491 aaKnown RBP7.37□□□□□ -1.23
TRIM3-204ENST00000526845 DSG2Q14126 1118 aa7.36□□□□□ -1.23
TRIM3-204ENST00000526845 GPHNQ9NQX3 736 aaPredicted RBP7.36□□□□□ -1.23
TRIM3-204ENST00000526845 TIMELESSQ9UNS1 1208 aa7.36□□□□□ -1.23
TRIM3-204ENST00000526845 TESPA1A2RU30 521 aaPredicted RBP7.35□□□□□ -1.23
TRIM3-204ENST00000526845 ZC3H15Q8WU90 426 aaKnown RBP7.34□□□□□ -1.23
TRIM3-204ENST00000526845 DDX27Q96GQ7 796 aaKnown RBP7.34□□□□□ -1.23
TRIM3-204ENST00000526845 MFSD10Q14728 455 aa7.33□□□□□ -1.24
TRIM3-204ENST00000526845 PPP1R15BQ5SWA1 713 aa7.33□□□□□ -1.24
TRIM3-204ENST00000526845 ARIH1Q9Y4X5 557 aaPredicted RBP7.33□□□□□ -1.24
TRIM3-204ENST00000526845 SEMA3EO15041 775 aa7.32□□□□□ -1.24
TRIM3-204ENST00000526845 PLPP6Q8IY26 295 aa7.32□□□□□ -1.24
TRIM3-204ENST00000526845 FOXK1P85037 733 aa7.31□□□□□ -1.24
TRIM3-204ENST00000526845 DAXXQ9UER7 740 aaPredicted RBP7.31□□□□□ -1.24
TRIM3-204ENST00000526845 BRPF1P55201 1214 aaPredicted RBP7.3□□□□□ -1.24
TRIM3-204ENST00000526845 HOXB3P14651 431 aaPredicted RBP7.29□□□□□ -1.24
TRIM3-204ENST00000526845 NEUROD2Q15784 382 aa7.28□□□□□ -1.24
TRIM3-204ENST00000526845 ZMYND10O75800 440 aa7.27□□□□□ -1.25
TRIM3-204ENST00000526845 CAMK2BQ13554 666 aa7.27□□□□□ -1.25
TRIM3-204ENST00000526845 C14orf37Q86TY3 774 aa7.27□□□□□ -1.25
TRIM3-204ENST00000526845 UPF1Q92900 1129 aaKnown RBP eCLIP7.27□□□□□ -1.25
TRIM3-204ENST00000526845 SLC24A3Q9HC58 644 aa7.27□□□□□ -1.25
TRIM3-204ENST00000526845 EMILIN3Q9NT22 766 aa7.25□□□□□ -1.25
TRIM3-204ENST00000526845 DOK7Q18PE1 504 aa7.24□□□□□ -1.25
TRIM3-204ENST00000526845 ZNF710Q8N1W2 664 aa7.23□□□□□ -1.25
TRIM3-204ENST00000526845 KHSRPQ92945 711 aaKnown RBP eCLIP7.23□□□□□ -1.25
TRIM3-204ENST00000526845 ARXQ96QS3 562 aa7.23□□□□□ -1.25
TRIM3-204ENST00000526845 DPYSL4O14531 572 aa7.22□□□□□ -1.25
TRIM3-204ENST00000526845 SNPHO15079 494 aa7.22□□□□□ -1.25
TRIM3-204ENST00000526845 BARGINQ6ZT62 677 aa7.22□□□□□ -1.25
TRIM3-204ENST00000526845 OXER1Q8TDS5 423 aa7.21□□□□□ -1.26
TRIM3-204ENST00000526845 PCDHGA4Q9Y5G9 962 aa7.21□□□□□ -1.26
TRIM3-204ENST00000526845 SPDYE16A6NNV3 312 aaPredicted RBP7.2□□□□□ -1.26
TRIM3-204ENST00000526845 RIMBP2O15034 1052 aa7.2□□□□□ -1.26
TRIM3-204ENST00000526845 SLC34A2O95436 690 aa7.2□□□□□ -1.26
TRIM3-204ENST00000526845 ARSIQ5FYB1 569 aa7.2□□□□□ -1.26
TRIM3-204ENST00000526845 GPIHBP1Q8IV16 184 aa7.2□□□□□ -1.26
TRIM3-204ENST00000526845 AK7Q96M32 723 aa7.2□□□□□ -1.26
TRIM3-204ENST00000526845 KRI1Q8N9T8 703 aaKnown RBP7.19□□□□□ -1.26
TRIM3-204ENST00000526845 PTCD2Q8WV60 388 aaKnown RBP7.19□□□□□ -1.26
TRIM3-204ENST00000526845 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
TRIM3-204ENST00000526845 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
TRIM3-204ENST00000526845 NUDT7P0C024 238 aa7.18□□□□□ -1.26
TRIM3-204ENST00000526845 GPR153Q6NV75 609 aa7.17□□□□□ -1.26
TRIM3-204ENST00000526845 MARVELD3Q96A59 401 aa7.17□□□□□ -1.26
TRIM3-204ENST00000526845 MAP3K9P80192 1104 aa7.16□□□□□ -1.26
TRIM3-204ENST00000526845 ZSWIM6Q9HCJ5 1215 aa7.16□□□□□ -1.26
TRIM3-204ENST00000526845 HOXB1P14653 301 aaPredicted RBP7.15□□□□□ -1.26
TRIM3-204ENST00000526845 RBM26Q5T8P6 1007 aaKnown RBP7.15□□□□□ -1.26
TRIM3-204ENST00000526845 EVI5O60447 810 aa7.14□□□□□ -1.27
TRIM3-204ENST00000526845 MLLT3P42568 568 aaPredicted RBP7.14□□□□□ -1.27
TRIM3-204ENST00000526845 PDIA6Q15084 440 aa7.14□□□□□ -1.27
TRIM3-204ENST00000526845 KDM4FA0A1W2PPD8 638 aa7.13□□□□□ -1.27
TRIM3-204ENST00000526845 TBC1D12O60347 775 aa7.13□□□□□ -1.27
TRIM3-204ENST00000526845 EMP3P54852 163 aa7.13□□□□□ -1.27
TRIM3-204ENST00000526845 ZNF316A6NFI3 1004 aaPredicted RBP7.11□□□□□ -1.27
TRIM3-204ENST00000526845 LHX6Q9UPM6 363 aa7.11□□□□□ -1.27
TRIM3-204ENST00000526845 HOMEZQ8IX15 550 aa7.1□□□□□ -1.27
TRIM3-204ENST00000526845 DDX12PQ92771 950 aa7.1□□□□□ -1.27
TRIM3-204ENST00000526845 FAM205CA6NFA0 338 aa7.09□□□□□ -1.27
TRIM3-204ENST00000526845 VARS2Q5ST30 1063 aaKnown RBP7.09□□□□□ -1.27
TRIM3-204ENST00000526845 ERBB3P21860 1342 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms