RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 MICALL2Q8IY33 904 aa11.35□□□□□ -0.59
SF3B2-205ENST00000526653 FBXO22Q8NEZ5 403 aa11.33□□□□□ -0.6
SF3B2-205ENST00000526653 NLRP6P59044 892 aa11.32□□□□□ -0.6
SF3B2-205ENST00000526653 MARVELD3Q96A59 401 aa11.32□□□□□ -0.6
SF3B2-205ENST00000526653 CDAN1Q8IWY9 1227 aa11.31□□□□□ -0.6
SF3B2-205ENST00000526653 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
SF3B2-205ENST00000526653 TMEM92Q6UXU6 159 aa11.29□□□□□ -0.6
SF3B2-205ENST00000526653 SHROOM4Q9ULL8 1493 aa11.29□□□□□ -0.6
SF3B2-205ENST00000526653 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
SF3B2-205ENST00000526653 SCRIBQ14160 1630 aa11.24□□□□□ -0.61
SF3B2-205ENST00000526653 EMP3P54852 163 aa11.23□□□□□ -0.61
SF3B2-205ENST00000526653 DOK7Q18PE1 504 aa11.21□□□□□ -0.61
SF3B2-205ENST00000526653 CUX2O14529 1486 aa11.2□□□□□ -0.62
SF3B2-205ENST00000526653 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
SF3B2-205ENST00000526653 POTEB3A0JP26 581 aa11.17□□□□□ -0.62
SF3B2-205ENST00000526653 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
SF3B2-205ENST00000526653 POTEBQ6S5H4 581 aa11.17□□□□□ -0.62
SF3B2-205ENST00000526653 ERCC6Q03468 1493 aa11.17□□□□□ -0.62
SF3B2-205ENST00000526653 HOXB1P14653 301 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-205ENST00000526653 HS6ST3Q8IZP7 471 aa11.16□□□□□ -0.62
SF3B2-205ENST00000526653 HS3ST6Q96QI5 342 aa11.16□□□□□ -0.62
SF3B2-205ENST00000526653 RIMBP2O15034 1052 aa11.14□□□□□ -0.63
SF3B2-205ENST00000526653 PPP1R37O75864 691 aa11.13□□□□□ -0.63
SF3B2-205ENST00000526653 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
SF3B2-205ENST00000526653 KIF3CO14782 793 aa11.1□□□□□ -0.63
SF3B2-205ENST00000526653 ZSWIM6Q9HCJ5 1215 aa11.1□□□□□ -0.63
SF3B2-205ENST00000526653 C2orf72A6NCS6 295 aa11.09□□□□□ -0.63
SF3B2-205ENST00000526653 GPR153Q6NV75 609 aa11.07□□□□□ -0.64
SF3B2-205ENST00000526653 ERBB3P21860 1342 aa11.07□□□□□ -0.64
SF3B2-205ENST00000526653 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
SF3B2-205ENST00000526653 KRTAP3-2Q9BYR7 98 aa11.05□□□□□ -0.64
SF3B2-205ENST00000526653 ZCCHC6Q5VYS8 1495 aaKnown RBP11.05□□□□□ -0.64
SF3B2-205ENST00000526653 DCAF1Q9Y4B6 1507 aa11.04□□□□□ -0.64
SF3B2-205ENST00000526653 SPNS2Q8IVW8 549 aa11.04□□□□□ -0.64
SF3B2-205ENST00000526653 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
SF3B2-205ENST00000526653 ARSIQ5FYB1 569 aa11.03□□□□□ -0.64
SF3B2-205ENST00000526653 TMC2Q8TDI7 906 aa11.03□□□□□ -0.64
SF3B2-205ENST00000526653 VARS2Q5ST30 1063 aaKnown RBP11.01□□□□□ -0.65
SF3B2-205ENST00000526653 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.65
SF3B2-205ENST00000526653 MMRN1Q13201 1228 aa10.98□□□□□ -0.65
SF3B2-205ENST00000526653 NESP48681 1621 aa10.95□□□□□ -0.66
SF3B2-205ENST00000526653 SLC34A2O95436 690 aa10.95□□□□□ -0.66
SF3B2-205ENST00000526653 ZNF316A6NFI3 1004 aaPredicted RBP10.93□□□□□ -0.66
SF3B2-205ENST00000526653 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
SF3B2-205ENST00000526653 NCAPD3P42695 1498 aa10.93□□□□□ -0.66
SF3B2-205ENST00000526653 NUDT7P0C024 238 aa10.92□□□□□ -0.66
SF3B2-205ENST00000526653 RYDENQ9NUL5 291 aaKnown RBP10.92□□□□□ -0.66
SF3B2-205ENST00000526653 PCDHGA4Q9Y5G9 962 aa10.92□□□□□ -0.66
SF3B2-205ENST00000526653 GPHNQ9NQX3 736 aaPredicted RBP10.9□□□□□ -0.66
SF3B2-205ENST00000526653 FOXK1P85037 733 aa10.89□□□□□ -0.67
SF3B2-205ENST00000526653 PLPP6Q8IY26 295 aa10.88□□□□□ -0.67
SF3B2-205ENST00000526653 GTPBP6O43824 516 aaPredicted RBP10.87□□□□□ -0.67
SF3B2-205ENST00000526653 DSG2Q14126 1118 aa10.87□□□□□ -0.67
SF3B2-205ENST00000526653 LHX6Q9UPM6 363 aa10.86□□□□□ -0.67
SF3B2-205ENST00000526653 PTCD2Q8WV60 388 aaKnown RBP10.84□□□□□ -0.67
SF3B2-205ENST00000526653 ATAD2BQ9ULI0 1458 aa10.82□□□□□ -0.68
SF3B2-205ENST00000526653 CRISPLD2Q9H0B8 497 aa10.82□□□□□ -0.68
SF3B2-205ENST00000526653 KDM4FA0A1W2PPD8 638 aa10.8□□□□□ -0.68
SF3B2-205ENST00000526653 NCKAP5LQ9HCH0 1330 aa10.79□□□□□ -0.68
SF3B2-205ENST00000526653 ANKRD13DQ6ZTN6 518 aa10.77□□□□□ -0.69
SF3B2-205ENST00000526653 PPP1R15BQ5SWA1 713 aa10.76□□□□□ -0.69
SF3B2-205ENST00000526653 POTEEQ6S8J3 1075 aa10.76□□□□□ -0.69
SF3B2-205ENST00000526653 SMARCA2P51531 1590 aa10.75□□□□□ -0.69
SF3B2-205ENST00000526653 TBC1D12O60347 775 aa10.75□□□□□ -0.69
SF3B2-205ENST00000526653 PDE4AP27815 886 aa10.75□□□□□ -0.69
SF3B2-205ENST00000526653 PBX2P40425 430 aa10.75□□□□□ -0.69
SF3B2-205ENST00000526653 LSM11P83369 360 aaKnown RBP eCLIP10.75□□□□□ -0.69
SF3B2-205ENST00000526653 AXIN2Q9Y2T1 843 aa10.75□□□□□ -0.69
SF3B2-205ENST00000526653 PDS5BQ9NTI5 1447 aa10.74□□□□□ -0.69
SF3B2-205ENST00000526653 THOC2Q8NI27 1593 aaKnown RBP10.73□□□□□ -0.69
SF3B2-205ENST00000526653 PSDA5PKW4 1024 aaPredicted RBP10.73□□□□□ -0.69
SF3B2-205ENST00000526653 OXER1Q8TDS5 423 aa10.73□□□□□ -0.69
SF3B2-205ENST00000526653 UPF1Q92900 1129 aaKnown RBP eCLIP10.73□□□□□ -0.69
SF3B2-205ENST00000526653 RNF166Q96A37 237 aaPredicted RBP10.73□□□□□ -0.69
SF3B2-205ENST00000526653 MYT1LQ9UL68 1186 aa10.72□□□□□ -0.69
SF3B2-205ENST00000526653 LARP6Q9BRS8 491 aaKnown RBP10.71□□□□□ -0.69
SF3B2-205ENST00000526653 PTGER2P43116 358 aa10.69□□□□□ -0.7
SF3B2-205ENST00000526653 CYB5RLQ6IPT4 315 aa10.68□□□□□ -0.7
SF3B2-205ENST00000526653 DDX27Q96GQ7 796 aaKnown RBP10.68□□□□□ -0.7
SF3B2-205ENST00000526653 BAZ1BQ9UIG0 1483 aaKnown RBP10.68□□□□□ -0.7
SF3B2-205ENST00000526653 ARHGAP33O14559 1287 aa10.67□□□□□ -0.7
SF3B2-205ENST00000526653 AMER1Q5JTC6 1135 aaPredicted RBP10.67□□□□□ -0.7
SF3B2-205ENST00000526653 CADPS2Q86UW7 1296 aa10.67□□□□□ -0.7
SF3B2-205ENST00000526653 MFSD10Q14728 455 aa10.66□□□□□ -0.7
SF3B2-205ENST00000526653 PPP4R3BQ5MIZ7 849 aa10.66□□□□□ -0.7
SF3B2-205ENST00000526653 HMGXB3Q12766 1538 aa10.66□□□□□ -0.7
SF3B2-205ENST00000526653 BBXQ8WY36 941 aaPredicted RBP10.65□□□□□ -0.7
SF3B2-205ENST00000526653 LAMC3Q9Y6N6 1575 aa10.65□□□□□ -0.71
SF3B2-205ENST00000526653 RTN4Q9NQC3 1192 aaKnown RBP10.64□□□□□ -0.71
SF3B2-205ENST00000526653 CADPSQ9ULU8 1353 aa10.64□□□□□ -0.71
SF3B2-205ENST00000526653 PSEN2P49810 448 aa10.63□□□□□ -0.71
SF3B2-205ENST00000526653 DMRTA1Q5VZB9 504 aa10.62□□□□□ -0.71
SF3B2-205ENST00000526653 ADGRD1Q6QNK2 874 aa10.61□□□□□ -0.71
SF3B2-205ENST00000526653 ZNF454Q8N9F8 522 aa10.61□□□□□ -0.71
SF3B2-205ENST00000526653 MRC2Q9UBG0 1479 aa10.61□□□□□ -0.71
SF3B2-205ENST00000526653 KIF21AQ7Z4S6 1674 aa10.6□□□□□ -0.71
SF3B2-205ENST00000526653 EVI5O60447 810 aa10.59□□□□□ -0.71
SF3B2-205ENST00000526653 ANO8Q9HCE9 1232 aaPredicted RBP10.59□□□□□ -0.71
SF3B2-205ENST00000526653 EMILIN3Q9NT22 766 aa10.59□□□□□ -0.71
SF3B2-205ENST00000526653 BAZ1AQ9NRL2 1556 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms