RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 CDC42BPBQ9Y5S2 1711 aa19.49■□□□□ 0.71
CAPN1-204ENST00000526468 YEATS2Q9ULM3 1422 aa19.49■□□□□ 0.71
CAPN1-204ENST00000526468 MAGI2Q86UL8 1455 aa19.48■□□□□ 0.71
CAPN1-204ENST00000526468 PREX2Q70Z35 1606 aa19.47■□□□□ 0.71
CAPN1-204ENST00000526468 UBTFP17480 764 aaKnown RBP19.46■□□□□ 0.71
CAPN1-204ENST00000526468 PREX1Q8TCU6 1659 aa19.46■□□□□ 0.71
CAPN1-204ENST00000526468 ARHGAP5Q13017 1502 aa19.46■□□□□ 0.71
CAPN1-204ENST00000526468 ITSN2Q9NZM3 1697 aa19.45■□□□□ 0.7
CAPN1-204ENST00000526468 PLCH2O75038 1416 aa19.44■□□□□ 0.7
CAPN1-204ENST00000526468 SCAPERQ9BY12 1400 aa19.43■□□□□ 0.7
CAPN1-204ENST00000526468 CDC42BPAQ5VT25 1732 aa19.43■□□□□ 0.7
CAPN1-204ENST00000526468 KDM5CP41229 1560 aa19.43■□□□□ 0.7
CAPN1-204ENST00000526468 ATP1B4Q9UN42 357 aaPredicted RBP19.42■□□□□ 0.7
CAPN1-204ENST00000526468 CLIP1P30622 1438 aa19.42■□□□□ 0.7
CAPN1-204ENST00000526468 TROQ12816 1431 aaPredicted RBP19.41■□□□□ 0.7
CAPN1-204ENST00000526468 ABCA6Q8N139 1617 aa19.4■□□□□ 0.7
CAPN1-204ENST00000526468 C9orf84Q5VXU9 1444 aa19.4■□□□□ 0.7
CAPN1-204ENST00000526468 DIP2CQ9Y2E4 1556 aa19.4■□□□□ 0.7
CAPN1-204ENST00000526468 ZNF518AQ6AHZ1 1483 aa19.39■□□□□ 0.69
CAPN1-204ENST00000526468 ARHGEF12Q9NZN5 1544 aa19.39■□□□□ 0.69
CAPN1-204ENST00000526468 ABCC1P33527 1531 aa19.37■□□□□ 0.69
CAPN1-204ENST00000526468 CCDC18Q5T9S5 1454 aa19.37■□□□□ 0.69
CAPN1-204ENST00000526468 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
CAPN1-204ENST00000526468 ATP10AO60312 1499 aa19.35■□□□□ 0.69
CAPN1-204ENST00000526468 CDK11AQ9UQ88 783 aaPredicted RBP19.34■□□□□ 0.69
CAPN1-204ENST00000526468 REREQ9P2R6 1566 aa19.33■□□□□ 0.69
CAPN1-204ENST00000526468 MLECQ14165 292 aa19.33■□□□□ 0.68
CAPN1-204ENST00000526468 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
CAPN1-204ENST00000526468 C3P01024 1663 aa19.33■□□□□ 0.68
CAPN1-204ENST00000526468 EFCAB2Q5VUJ9 269 aa19.31■□□□□ 0.68
CAPN1-204ENST00000526468 SETD1BQ9UPS6 1966 aaKnown RBP19.31■□□□□ 0.68
CAPN1-204ENST00000526468 FYCO1Q9BQS8 1478 aa19.3■□□□□ 0.68
CAPN1-204ENST00000526468 KIDINS220Q9ULH0 1771 aa19.3■□□□□ 0.68
CAPN1-204ENST00000526468 CASKIN1Q8WXD9 1431 aa19.3■□□□□ 0.68
CAPN1-204ENST00000526468 HSPA2P54652 639 aa19.27■□□□□ 0.68
CAPN1-204ENST00000526468 FBXO41Q8TF61 875 aa19.27■□□□□ 0.68
CAPN1-204ENST00000526468 STRCQ7RTU9 1775 aa19.27■□□□□ 0.67
CAPN1-204ENST00000526468 SAMD9LQ8IVG5 1584 aa19.26■□□□□ 0.67
CAPN1-204ENST00000526468 SUPT6HQ7KZ85 1726 aaKnown RBP19.25■□□□□ 0.67
CAPN1-204ENST00000526468 SYCP2Q9BX26 1530 aa19.23■□□□□ 0.67
CAPN1-204ENST00000526468 MLH3Q9UHC1 1453 aa19.22■□□□□ 0.67
CAPN1-204ENST00000526468 MROH2AA6NES4 1674 aa19.22■□□□□ 0.67
CAPN1-204ENST00000526468 MYT1LQ9UL68 1186 aa19.22■□□□□ 0.67
CAPN1-204ENST00000526468 AGLP35573 1532 aa19.2■□□□□ 0.66
CAPN1-204ENST00000526468 TRAPPC8Q9Y2L5 1435 aa19.2■□□□□ 0.66
CAPN1-204ENST00000526468 INO80Q9ULG1 1556 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-204ENST00000526468 AFAP1Q8N556 730 aa19.18■□□□□ 0.66
CAPN1-204ENST00000526468 UHRF1BP1Q6BDS2 1440 aa19.17■□□□□ 0.66
CAPN1-204ENST00000526468 CLTCQ00610 1675 aaKnown RBP19.17■□□□□ 0.66
CAPN1-204ENST00000526468 ATP7AQ04656 1500 aa19.15■□□□□ 0.66
CAPN1-204ENST00000526468 ADGBQ8N7X0 1667 aa19.15■□□□□ 0.66
CAPN1-204ENST00000526468 ZNF142P52746 1687 aaPredicted RBP19.12■□□□□ 0.65
CAPN1-204ENST00000526468 PLXNC1O60486 1568 aa19.12■□□□□ 0.65
CAPN1-204ENST00000526468 CEBPAP49715 358 aaPredicted RBP19.12■□□□□ 0.65
CAPN1-204ENST00000526468 MYO3AQ8NEV4 1616 aa19.11■□□□□ 0.65
CAPN1-204ENST00000526468 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
CAPN1-204ENST00000526468 EHBP1L1Q8N3D4 1523 aa19.1■□□□□ 0.65
CAPN1-204ENST00000526468 GPATCH8Q9UKJ3 1502 aaKnown RBP19.1■□□□□ 0.65
CAPN1-204ENST00000526468 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.65
CAPN1-204ENST00000526468 PLEKHH2Q8IVE3 1493 aa19.08■□□□□ 0.64
CAPN1-204ENST00000526468 ESF1Q9H501 851 aaKnown RBP19.06■□□□□ 0.64
CAPN1-204ENST00000526468 ZNF777Q9ULD5 760 aaPredicted RBP19.06■□□□□ 0.64
CAPN1-204ENST00000526468 CERKQ8TCT0 537 aa19.03■□□□□ 0.64
CAPN1-204ENST00000526468 MTUS2Q5JR59 1369 aa19.03■□□□□ 0.64
CAPN1-204ENST00000526468 CCNB3Q8WWL7 1395 aa19.03■□□□□ 0.64
CAPN1-204ENST00000526468 CAMSAP1Q5T5Y3 1602 aa19.02■□□□□ 0.64
CAPN1-204ENST00000526468 SPAG9O60271 1321 aaKnown RBP19■□□□□ 0.63
CAPN1-204ENST00000526468 A2MP01023 1474 aa19■□□□□ 0.63
CAPN1-204ENST00000526468 POLR1AO95602 1720 aaPredicted RBP19■□□□□ 0.63
CAPN1-204ENST00000526468 KIAA1107Q9UPP5 1409 aa19■□□□□ 0.63
CAPN1-204ENST00000526468 CEP170BQ9Y4F5 1589 aaPredicted RBP18.99■□□□□ 0.63
CAPN1-204ENST00000526468 NPATQ14207 1427 aa18.99■□□□□ 0.63
CAPN1-204ENST00000526468 NCOA1Q15788 1441 aa18.99■□□□□ 0.63
CAPN1-204ENST00000526468 PTPRTO14522 1441 aa18.97■□□□□ 0.63
CAPN1-204ENST00000526468 CFDP1Q9UEE9 299 aaPredicted RBP18.96■□□□□ 0.63
CAPN1-204ENST00000526468 DMRT2Q9Y5R5 561 aa18.96■□□□□ 0.63
CAPN1-204ENST00000526468 CEP162Q5TB80 1403 aa18.96■□□□□ 0.63
CAPN1-204ENST00000526468 HNRNPMP52272 730 aaKnown RBP eCLIP18.95■□□□□ 0.62
CAPN1-204ENST00000526468 LTBP4Q8N2S1 1624 aa18.94■□□□□ 0.62
CAPN1-204ENST00000526468 CAMSAP2Q08AD1 1489 aa18.92■□□□□ 0.62
CAPN1-204ENST00000526468 SPATA31D1Q6ZQQ2 1576 aa18.91■□□□□ 0.62
CAPN1-204ENST00000526468 ZMYM3Q14202 1370 aa18.9■□□□□ 0.62
CAPN1-204ENST00000526468 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
CAPN1-204ENST00000526468 NCOA2Q15596 1464 aa18.89■□□□□ 0.61
CAPN1-204ENST00000526468 PTPRKQ15262 1439 aa18.88■□□□□ 0.61
CAPN1-204ENST00000526468 IQSEC2Q5JU85 1478 aa18.88■□□□□ 0.61
CAPN1-204ENST00000526468 MBD5Q9P267 1494 aa18.88■□□□□ 0.61
CAPN1-204ENST00000526468 KDM5DQ9BY66 1539 aa18.88■□□□□ 0.61
CAPN1-204ENST00000526468 PLA2R1Q13018 1463 aa18.87■□□□□ 0.61
CAPN1-204ENST00000526468 FAM135AQ9P2D6 1515 aa18.87■□□□□ 0.61
CAPN1-204ENST00000526468 DNMT1P26358 1616 aaKnown RBP18.86■□□□□ 0.61
CAPN1-204ENST00000526468 ARHGEF5Q12774 1597 aa18.86■□□□□ 0.61
CAPN1-204ENST00000526468 ZNF644Q9H582 1327 aaPredicted RBP18.85■□□□□ 0.61
CAPN1-204ENST00000526468 ZC3H13Q5T200 1668 aaKnown RBP18.85■□□□□ 0.61
CAPN1-204ENST00000526468 RTEL1-TNFRSF6BF6WH68 1400 aa18.83■□□□□ 0.61
CAPN1-204ENST00000526468 RNF17Q9BXT8 1623 aaKnown RBP18.83■□□□□ 0.61
CAPN1-204ENST00000526468 CFAP65Q6ZU64 1925 aaKnown RBP18.83■□□□□ 0.6
CAPN1-204ENST00000526468 GGT6Q6P531 493 aa18.83■□□□□ 0.6
CAPN1-204ENST00000526468 TCOF1Q13428 1488 aaKnown RBP18.83■□□□□ 0.6
CAPN1-204ENST00000526468 CEP152O94986 1710 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms