RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 GPR153Q6NV75 609 aa10.29□□□□□ -0.76
ECHDC1-219ENST00000526299 BCL11BQ9C0K0 894 aaPredicted RBP10.29□□□□□ -0.76
ECHDC1-219ENST00000526299 ZSWIM6Q9HCJ5 1215 aa10.29□□□□□ -0.76
ECHDC1-219ENST00000526299 NLRP6P59044 892 aa10.27□□□□□ -0.77
ECHDC1-219ENST00000526299 FBXO22Q8NEZ5 403 aa10.27□□□□□ -0.77
ECHDC1-219ENST00000526299 STK24Q9Y6E0 443 aa10.26□□□□□ -0.77
ECHDC1-219ENST00000526299 ARSIQ5FYB1 569 aa10.25□□□□□ -0.77
ECHDC1-219ENST00000526299 ZNF687Q8N1G0 1237 aa10.24□□□□□ -0.77
ECHDC1-219ENST00000526299 MFRPQ9BY79 579 aa10.23□□□□□ -0.77
ECHDC1-219ENST00000526299 KHSRPQ92945 711 aaKnown RBP eCLIP10.22□□□□□ -0.771e-13■■■■□ 24.3
ECHDC1-219ENST00000526299 RNF166Q96A37 237 aaPredicted RBP10.21□□□□□ -0.77
ECHDC1-219ENST00000526299 TAOK2Q9UL54 1235 aa10.21□□□□□ -0.77
ECHDC1-219ENST00000526299 STK25O00506 426 aa10.2□□□□□ -0.78
ECHDC1-219ENST00000526299 ECM2O94769 699 aaPredicted RBP10.19□□□□□ -0.78
ECHDC1-219ENST00000526299 MYT1LQ9UL68 1186 aa10.18□□□□□ -0.78
ECHDC1-219ENST00000526299 ZNF316A6NFI3 1004 aaPredicted RBP10.17□□□□□ -0.78
ECHDC1-219ENST00000526299 C2orf72A6NCS6 295 aa10.16□□□□□ -0.78
ECHDC1-219ENST00000526299 KIF3CO14782 793 aa10.15□□□□□ -0.78
ECHDC1-219ENST00000526299 RGL2O15211 777 aa10.13□□□□□ -0.79
ECHDC1-219ENST00000526299 ANKRD13DQ6ZTN6 518 aa10.13□□□□□ -0.79
ECHDC1-219ENST00000526299 PKD2Q13563 968 aa10.12□□□□□ -0.79
ECHDC1-219ENST00000526299 NUDT7P0C024 238 aa10.11□□□□□ -0.79
ECHDC1-219ENST00000526299 PTGER2P43116 358 aa10.07□□□□□ -0.8
ECHDC1-219ENST00000526299 LSM11P83369 360 aaKnown RBP eCLIP10.07□□□□□ -0.8
ECHDC1-219ENST00000526299 PCDHGA4Q9Y5G9 962 aa10.07□□□□□ -0.8
ECHDC1-219ENST00000526299 PPP1R37O75864 691 aa10.06□□□□□ -0.8
ECHDC1-219ENST00000526299 TMC2Q8TDI7 906 aa10.06□□□□□ -0.8
ECHDC1-219ENST00000526299 LHX6Q9UPM6 363 aa10.06□□□□□ -0.8
ECHDC1-219ENST00000526299 SLC34A2O95436 690 aa10.04□□□□□ -0.8
ECHDC1-219ENST00000526299 POTEEQ6S8J3 1075 aa10.04□□□□□ -0.8
ECHDC1-219ENST00000526299 AXIN2Q9Y2T1 843 aa10.04□□□□□ -0.8
ECHDC1-219ENST00000526299 PBX2P40425 430 aa9.99□□□□□ -0.81
ECHDC1-219ENST00000526299 KDM4FA0A1W2PPD8 638 aa9.93□□□□□ -0.82
ECHDC1-219ENST00000526299 PTCD2Q8WV60 388 aaKnown RBP9.92□□□□□ -0.82
ECHDC1-219ENST00000526299 ARHGAP33O14559 1287 aa9.91□□□□□ -0.82
ECHDC1-219ENST00000526299 ADGRD1Q6QNK2 874 aa9.91□□□□□ -0.82
ECHDC1-219ENST00000526299 PLPP6Q8IY26 295 aa9.91□□□□□ -0.82
ECHDC1-219ENST00000526299 FOXK1P85037 733 aa9.9□□□□□ -0.82
ECHDC1-219ENST00000526299 HS6ST3Q8IZP7 471 aa9.89□□□□□ -0.83
ECHDC1-219ENST00000526299 PSDA5PKW4 1024 aaPredicted RBP9.88□□□□□ -0.83
ECHDC1-219ENST00000526299 GPHNQ9NQX3 736 aaPredicted RBP9.88□□□□□ -0.83
ECHDC1-219ENST00000526299 PSEN2P49810 448 aa9.87□□□□□ -0.83
ECHDC1-219ENST00000526299 DSG2Q14126 1118 aa9.87□□□□□ -0.83
ECHDC1-219ENST00000526299 DMRTA1Q5VZB9 504 aa9.87□□□□□ -0.83
ECHDC1-219ENST00000526299 HCSTQ9UBK5 93 aa9.84□□□□□ -0.83
ECHDC1-219ENST00000526299 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
ECHDC1-219ENST00000526299 PLA2G2EQ9NZK7 142 aa9.83□□□□□ -0.84
ECHDC1-219ENST00000526299 TK2O00142 265 aa9.82□□□□□ -0.84
ECHDC1-219ENST00000526299 HRO43593 1189 aa9.82□□□□□ -0.84
ECHDC1-219ENST00000526299 PPP4R3BQ5MIZ7 849 aa9.82□□□□□ -0.84
ECHDC1-219ENST00000526299 TBC1D12O60347 775 aa9.81□□□□□ -0.84
ECHDC1-219ENST00000526299 NKX1-1Q15270 411 aaPredicted RBP9.8□□□□□ -0.84
ECHDC1-219ENST00000526299 UPF1Q92900 1129 aaKnown RBP eCLIP9.78□□□□□ -0.84
ECHDC1-219ENST00000526299 KCNK17Q96T54 332 aa9.78□□□□□ -0.84
ECHDC1-219ENST00000526299 KCTD12Q96CX2 325 aaKnown RBP9.77□□□□□ -0.85
ECHDC1-219ENST00000526299 OXER1Q8TDS5 423 aa9.76□□□□□ -0.85
ECHDC1-219ENST00000526299 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
ECHDC1-219ENST00000526299 ZNF454Q8N9F8 522 aa9.73□□□□□ -0.85
ECHDC1-219ENST00000526299 CRISPLD2Q9H0B8 497 aa9.73□□□□□ -0.85
ECHDC1-219ENST00000526299 DNAJC5Q9H3Z4 198 aa9.73□□□□□ -0.85
ECHDC1-219ENST00000526299 KCNH8Q96L42 1107 aa9.72□□□□□ -0.85
ECHDC1-219ENST00000526299 VPS9D1Q9Y2B5 631 aa9.72□□□□□ -0.85
ECHDC1-219ENST00000526299 PPP1R15BQ5SWA1 713 aa9.71□□□□□ -0.86
ECHDC1-219ENST00000526299 NCKAP5LQ9HCH0 1330 aa9.68□□□□□ -0.86
ECHDC1-219ENST00000526299 BCL2L12Q9HB09 334 aa9.68□□□□□ -0.86
ECHDC1-219ENST00000526299 FOSBP53539 338 aa9.67□□□□□ -0.86
ECHDC1-219ENST00000526299 PTPN5P54829 565 aa9.67□□□□□ -0.86
ECHDC1-219ENST00000526299 RYDENQ9NUL5 291 aaKnown RBP9.67□□□□□ -0.86
ECHDC1-219ENST00000526299 PDE4AP27815 886 aa9.65□□□□□ -0.86
ECHDC1-219ENST00000526299 PTPREP23469 700 aa9.63□□□□□ -0.87
ECHDC1-219ENST00000526299 SLC4A5Q9BY07 1137 aa9.63□□□□□ -0.87
ECHDC1-219ENST00000526299 ANO8Q9HCE9 1232 aaPredicted RBP9.63□□□□□ -0.87
ECHDC1-219ENST00000526299 BHMG1C9JSJ3 638 aaPredicted RBP9.62□□□□□ -0.87
ECHDC1-219ENST00000526299 EVI5O60447 810 aa9.62□□□□□ -0.87
ECHDC1-219ENST00000526299 ZBED2Q9BTP6 218 aa9.62□□□□□ -0.87
ECHDC1-219ENST00000526299 GTPBP6O43824 516 aaPredicted RBP9.61□□□□□ -0.87
ECHDC1-219ENST00000526299 JPH4Q96JJ6 628 aa9.61□□□□□ -0.87
ECHDC1-219ENST00000526299 LARP6Q9BRS8 491 aaKnown RBP9.61□□□□□ -0.87
ECHDC1-219ENST00000526299 ADAM33Q9BZ11 813 aa9.61□□□□□ -0.87
ECHDC1-219ENST00000526299 THSD4Q6ZMP0 1018 aa9.6□□□□□ -0.87
ECHDC1-219ENST00000526299 ZDHHC16Q969W1 377 aa9.6□□□□□ -0.87
ECHDC1-219ENST00000526299 DDX27Q96GQ7 796 aaKnown RBP9.58□□□□□ -0.88
ECHDC1-219ENST00000526299 GOLGA8CPA6NN73 597 aa9.57□□□□□ -0.88
ECHDC1-219ENST00000526299 MRPL50Q8N5N7 158 aaKnown RBP9.57□□□□□ -0.88
ECHDC1-219ENST00000526299 WNT2BQ93097 391 aa9.57□□□□□ -0.88
ECHDC1-219ENST00000526299 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
ECHDC1-219ENST00000526299 EMILIN3Q9NT22 766 aa9.56□□□□□ -0.88
ECHDC1-219ENST00000526299 MFSD10Q14728 455 aa9.54□□□□□ -0.88
ECHDC1-219ENST00000526299 NBPF3Q9H094 633 aa9.52□□□□□ -0.89
ECHDC1-219ENST00000526299 PCDHGA10Q9Y5H3 936 aa9.52□□□□□ -0.89
ECHDC1-219ENST00000526299 IFFO2Q5TF58 517 aa9.51□□□□□ -0.89
ECHDC1-219ENST00000526299 PROX2Q3B8N5 592 aa9.5□□□□□ -0.89
ECHDC1-219ENST00000526299 CADPS2Q86UW7 1296 aa9.5□□□□□ -0.89
ECHDC1-219ENST00000526299 PPP1R3GB7ZBB8 358 aa9.49□□□□□ -0.89
ECHDC1-219ENST00000526299 DCAF8L2P0C7V8 631 aa9.49□□□□□ -0.89
ECHDC1-219ENST00000526299 COL9A1P20849 921 aa9.49□□□□□ -0.89
ECHDC1-219ENST00000526299 A0A0G2JS52 829 aa9.48□□□□□ -0.89
ECHDC1-219ENST00000526299 RABGEF1Q9UJ41 708 aa9.47□□□□□ -0.89
ECHDC1-219ENST00000526299 RGS20O76081 388 aa9.45□□□□□ -0.9
ECHDC1-219ENST00000526299 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms