RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 ARHGAP5Q13017 1502 aa27.24■■□□□ 1.95
CCS-203ENST00000526058 PREX2Q70Z35 1606 aa27.19■■□□□ 1.94
CCS-203ENST00000526058 CDC42BPAQ5VT25 1732 aa27.19■■□□□ 1.94
CCS-203ENST00000526058 POGZQ7Z3K3 1410 aa27.18■■□□□ 1.94
CCS-203ENST00000526058 ZMYM4Q5VZL5 1548 aa27.18■■□□□ 1.94
CCS-203ENST00000526058 ARHGEF40Q8TER5 1519 aa27.16■■□□□ 1.94
CCS-203ENST00000526058 MTUS2Q5JR59 1369 aa27.14■■□□□ 1.94
CCS-203ENST00000526058 YEATS2Q9ULM3 1422 aa27.13■■□□□ 1.93
CCS-203ENST00000526058 ZFYVE16Q7Z3T8 1539 aa27.11■■□□□ 1.93
CCS-203ENST00000526058 MAGI2Q86UL8 1455 aa27.1■■□□□ 1.93
CCS-203ENST00000526058 GPATCH8Q9UKJ3 1502 aaKnown RBP27.1■■□□□ 1.93
CCS-203ENST00000526058 VPS8Q8N3P4 1428 aa27.09■■□□□ 1.93
CCS-203ENST00000526058 ARID4BQ4LE39 1312 aaPredicted RBP27.09■■□□□ 1.93
CCS-203ENST00000526058 AFAP1Q8N556 730 aa27.08■■□□□ 1.93
CCS-203ENST00000526058 ARHGEF12Q9NZN5 1544 aa27.07■■□□□ 1.92
CCS-203ENST00000526058 ZNF518AQ6AHZ1 1483 aa27.06■■□□□ 1.92
CCS-203ENST00000526058 ABCC1P33527 1531 aa27.06■■□□□ 1.92
CCS-203ENST00000526058 EHBP1L1Q8N3D4 1523 aa27.06■■□□□ 1.92
CCS-203ENST00000526058 SIGLEC1Q9BZZ2 1709 aa27.05■■□□□ 1.92
CCS-203ENST00000526058 ZNF777Q9ULD5 760 aaPredicted RBP27.05■■□□□ 1.92
CCS-203ENST00000526058 ADAMTSL3P82987 1691 aa27.05■■□□□ 1.92
CCS-203ENST00000526058 ITSN2Q9NZM3 1697 aa27.05■■□□□ 1.92
CCS-203ENST00000526058 BCORL1Q5H9F3 1711 aa27.04■■□□□ 1.92
CCS-203ENST00000526058 CCNB3Q8WWL7 1395 aa27.04■■□□□ 1.92
CCS-203ENST00000526058 KDM5CP41229 1560 aa27.04■■□□□ 1.92
CCS-203ENST00000526058 TRAPPC8Q9Y2L5 1435 aa27.03■■□□□ 1.92
CCS-203ENST00000526058 TIAM1Q13009 1591 aa27.02■■□□□ 1.92
CCS-203ENST00000526058 SAMD9LQ8IVG5 1584 aa27.02■■□□□ 1.92
CCS-203ENST00000526058 CFDP1Q9UEE9 299 aaPredicted RBP27■■□□□ 1.91
CCS-203ENST00000526058 ATP10AO60312 1499 aa26.98■■□□□ 1.91
CCS-203ENST00000526058 HECW2Q9P2P5 1572 aa26.97■■□□□ 1.91
CCS-203ENST00000526058 MYT1LQ9UL68 1186 aa26.97■■□□□ 1.91
CCS-203ENST00000526058 MADDQ8WXG6 1647 aa26.96■■□□□ 1.91
CCS-203ENST00000526058 SYCP2Q9BX26 1530 aa26.95■■□□□ 1.91
CCS-203ENST00000526058 SUPT6HQ7KZ85 1726 aaKnown RBP26.94■■□□□ 1.9
CCS-203ENST00000526058 HNRNPMP52272 730 aaKnown RBP eCLIP26.94■■□□□ 1.9
CCS-203ENST00000526058 MLH3Q9UHC1 1453 aa26.93■■□□□ 1.9
CCS-203ENST00000526058 C9orf84Q5VXU9 1444 aa26.93■■□□□ 1.9
CCS-203ENST00000526058 NCOA2Q15596 1464 aa26.93■■□□□ 1.9
CCS-203ENST00000526058 PTPRMP28827 1452 aa26.92■■□□□ 1.9
CCS-203ENST00000526058 DIP2CQ9Y2E4 1556 aa26.92■■□□□ 1.9
CCS-203ENST00000526058 MLECQ14165 292 aa26.91■■□□□ 1.9
CCS-203ENST00000526058 LRRC9Q6ZRR7 1453 aa26.91■■□□□ 1.9
CCS-203ENST00000526058 ABCA6Q8N139 1617 aa26.9■■□□□ 1.9
CCS-203ENST00000526058 KIAA1107Q9UPP5 1409 aa26.9■■□□□ 1.9
CCS-203ENST00000526058 ZNF644Q9H582 1327 aaPredicted RBP26.9■■□□□ 1.9
CCS-203ENST00000526058 KIDINS220Q9ULH0 1771 aa26.89■■□□□ 1.9
CCS-203ENST00000526058 KANK4Q5T7N3 995 aaPredicted RBP26.89■■□□□ 1.9
CCS-203ENST00000526058 PLEKHH2Q8IVE3 1493 aa26.88■■□□□ 1.89
CCS-203ENST00000526058 MAP3K1Q13233 1512 aa26.88■■□□□ 1.89
CCS-203ENST00000526058 RIMS1Q86UR5 1692 aaKnown RBP26.88■■□□□ 1.89
CCS-203ENST00000526058 REREQ9P2R6 1566 aa26.83■■□□□ 1.89
CCS-203ENST00000526058 SPAG9O60271 1321 aaKnown RBP26.82■■□□□ 1.88
CCS-203ENST00000526058 FER1L4A9Z1Z3 1794 aa26.81■■□□□ 1.88
CCS-203ENST00000526058 MBD5Q9P267 1494 aa26.8■■□□□ 1.88
CCS-203ENST00000526058 ATP7AQ04656 1500 aa26.78■■□□□ 1.88
CCS-203ENST00000526058 INO80Q9ULG1 1556 aaPredicted RBP26.77■■□□□ 1.88
CCS-203ENST00000526058 CAMSAP2Q08AD1 1489 aa26.76■■□□□ 1.87
CCS-203ENST00000526058 APLP2Q06481 763 aa26.76■■□□□ 1.87
CCS-203ENST00000526058 PLPPR3Q6T4P5 718 aa26.76■■□□□ 1.87
CCS-203ENST00000526058 AGLP35573 1532 aa26.74■■□□□ 1.87
CCS-203ENST00000526058 CCDC141Q6ZP82 1450 aa26.68■■□□□ 1.86
CCS-203ENST00000526058 MYOM3Q5VTT5 1437 aa26.66■■□□□ 1.86
CCS-203ENST00000526058 A2MP01023 1474 aa26.66■■□□□ 1.86
CCS-203ENST00000526058 PLXNC1O60486 1568 aa26.65■■□□□ 1.86
CCS-203ENST00000526058 RTEL1-TNFRSF6BF6WH68 1400 aa26.65■■□□□ 1.86
CCS-203ENST00000526058 ADGBQ8N7X0 1667 aa26.64■■□□□ 1.86
CCS-203ENST00000526058 CEBPAP49715 358 aaPredicted RBP26.64■■□□□ 1.86
CCS-203ENST00000526058 RSPH4AQ5TD94 716 aa26.64■■□□□ 1.86
CCS-203ENST00000526058 ARHGEF5Q12774 1597 aa26.63■■□□□ 1.85
CCS-203ENST00000526058 MIA2Q96PC5 1412 aa26.62■■□□□ 1.85
CCS-203ENST00000526058 LMTK3Q96Q04 1460 aa26.6■■□□□ 1.85
CCS-203ENST00000526058 ESF1Q9H501 851 aaKnown RBP26.58■■□□□ 1.85
CCS-203ENST00000526058 TSPY4P0CV99 314 aa26.56■■□□□ 1.84
CCS-203ENST00000526058 TSPY10P0CW01 314 aa26.56■■□□□ 1.84
CCS-203ENST00000526058 C3P01024 1663 aa26.56■■□□□ 1.84
CCS-203ENST00000526058 DHX29Q7Z478 1369 aaKnown RBP26.55■■□□□ 1.84
CCS-203ENST00000526058 GGT6Q6P531 493 aa26.53■■□□□ 1.84
CCS-203ENST00000526058 PTPN23Q9H3S7 1636 aa26.52■■□□□ 1.84
CCS-203ENST00000526058 CNTLNQ9NXG0 1405 aa26.51■■□□□ 1.83
CCS-203ENST00000526058 HSPA2P54652 639 aa26.5■■□□□ 1.83
CCS-203ENST00000526058 MAST1Q9Y2H9 1570 aa26.5■■□□□ 1.83
CCS-203ENST00000526058 CLTCQ00610 1675 aaKnown RBP26.49■■□□□ 1.83
CCS-203ENST00000526058 PREX1Q8TCU6 1659 aa26.49■■□□□ 1.83
CCS-203ENST00000526058 FGD6Q6ZV73 1430 aa26.48■■□□□ 1.83
CCS-203ENST00000526058 SETD1BQ9UPS6 1966 aaKnown RBP26.48■■□□□ 1.83
CCS-203ENST00000526058 MROH2AA6NES4 1674 aa26.47■■□□□ 1.83
CCS-203ENST00000526058 ZMYM3Q14202 1370 aa26.46■■□□□ 1.83
CCS-203ENST00000526058 KIF3BO15066 747 aa26.45■■□□□ 1.82
CCS-203ENST00000526058 TCOF1Q13428 1488 aaKnown RBP26.44■■□□□ 1.82
CCS-203ENST00000526058 ABCC5O15440 1437 aa26.43■■□□□ 1.82
CCS-203ENST00000526058 CROCC2H7BZ55 1655 aa26.42■■□□□ 1.82
CCS-203ENST00000526058 PPP6R1Q9UPN7 881 aa26.41■■□□□ 1.82
CCS-203ENST00000526058 UHRF1BP1Q6BDS2 1440 aa26.39■■□□□ 1.82
CCS-203ENST00000526058 DNMT1P26358 1616 aaKnown RBP26.39■■□□□ 1.82
CCS-203ENST00000526058 DAPK1P53355 1430 aa26.39■■□□□ 1.81
CCS-203ENST00000526058 SHANK2Q9UPX8 1470 aa26.37■■□□□ 1.81
CCS-203ENST00000526058 NPATQ14207 1427 aa26.34■■□□□ 1.81
CCS-203ENST00000526058 PPARGC1BQ86YN6 1023 aaKnown RBP26.34■■□□□ 1.81
CCS-203ENST00000526058 PTPRKQ15262 1439 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms