RNA–Protein interactions for RNA: ENST00000525982.5

CPNE7-203, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-203ENST00000525982 TROQ12816 1431 aaPredicted RBP34.51■■■■□ 3.12
CPNE7-203ENST00000525982 POGZQ7Z3K3 1410 aa34.51■■■■□ 3.12
CPNE7-203ENST00000525982 SCAPERQ9BY12 1400 aa34.51■■■■□ 3.12
CPNE7-203ENST00000525982 CLIP1P30622 1438 aa34.48■■■■□ 3.11
CPNE7-203ENST00000525982 EFCAB2Q5VUJ9 269 aa34.47■■■■□ 3.11
CPNE7-203ENST00000525982 RIMS1Q86UR5 1692 aaKnown RBP34.47■■■■□ 3.11
CPNE7-203ENST00000525982 YEATS2Q9ULM3 1422 aa34.47■■■■□ 3.11
CPNE7-203ENST00000525982 ILDR1Q86SU0 546 aaPredicted RBP34.43■■■■□ 3.1
CPNE7-203ENST00000525982 SIGLEC1Q9BZZ2 1709 aa34.42■■■■□ 3.1
CPNE7-203ENST00000525982 CCDC18Q5T9S5 1454 aa34.41■■■■□ 3.1
CPNE7-203ENST00000525982 CASKIN1Q8WXD9 1431 aa34.4■■■■□ 3.1
CPNE7-203ENST00000525982 PCF11O94913 1555 aaKnown RBP34.4■■■■□ 3.1
CPNE7-203ENST00000525982 ARHGAP5Q13017 1502 aa34.39■■■■□ 3.1
CPNE7-203ENST00000525982 CEP162Q5TB80 1403 aa34.38■■■■□ 3.09
CPNE7-203ENST00000525982 ZNF518AQ6AHZ1 1483 aa34.37■■■■□ 3.09
CPNE7-203ENST00000525982 ATP10AO60312 1499 aa34.34■■■■□ 3.09
CPNE7-203ENST00000525982 CDC42BPBQ9Y5S2 1711 aa34.33■■■■□ 3.09
CPNE7-203ENST00000525982 FER1L4A9Z1Z3 1794 aa34.33■■■■□ 3.09
CPNE7-203ENST00000525982 LMTK3Q96Q04 1460 aa34.32■■■■□ 3.08
CPNE7-203ENST00000525982 KDM5CP41229 1560 aa34.32■■■■□ 3.08
CPNE7-203ENST00000525982 C9orf84Q5VXU9 1444 aa34.31■■■■□ 3.08
CPNE7-203ENST00000525982 PREX2Q70Z35 1606 aa34.3■■■■□ 3.08
CPNE7-203ENST00000525982 FYCO1Q9BQS8 1478 aa34.29■■■■□ 3.08
CPNE7-203ENST00000525982 ARHGEF12Q9NZN5 1544 aa34.24■■■■□ 3.07
CPNE7-203ENST00000525982 MLECQ14165 292 aa34.2■■■■□ 3.07
CPNE7-203ENST00000525982 ABCC1P33527 1531 aa34.2■■■■□ 3.06
CPNE7-203ENST00000525982 CDC42BPAQ5VT25 1732 aa34.19■■■■□ 3.06
CPNE7-203ENST00000525982 AFAP1Q8N556 730 aa34.19■■■■□ 3.06
CPNE7-203ENST00000525982 REREQ9P2R6 1566 aa34.18■■■■□ 3.06
CPNE7-203ENST00000525982 ITSN2Q9NZM3 1697 aa34.17■■■■□ 3.06
CPNE7-203ENST00000525982 DIP2CQ9Y2E4 1556 aa34.17■■■■□ 3.06
CPNE7-203ENST00000525982 MLH3Q9UHC1 1453 aa34.16■■■■□ 3.06
CPNE7-203ENST00000525982 ABCA6Q8N139 1617 aa34.12■■■■□ 3.05
CPNE7-203ENST00000525982 PLPPR3Q6T4P5 718 aa34.09■■■■□ 3.05
CPNE7-203ENST00000525982 MYT1LQ9UL68 1186 aa34.09■■■■□ 3.05
CPNE7-203ENST00000525982 TRAPPC8Q9Y2L5 1435 aa34.08■■■■□ 3.05
CPNE7-203ENST00000525982 PREX1Q8TCU6 1659 aa34.06■■■■□ 3.04
CPNE7-203ENST00000525982 AGLP35573 1532 aa34.04■■■■□ 3.04
CPNE7-203ENST00000525982 KIDINS220Q9ULH0 1771 aa34.03■■■■□ 3.04
CPNE7-203ENST00000525982 HSPA2P54652 639 aa34.02■■■■□ 3.04
CPNE7-203ENST00000525982 GPATCH8Q9UKJ3 1502 aaKnown RBP34■■■■□ 3.03
CPNE7-203ENST00000525982 SAMD9LQ8IVG5 1584 aa34■■■■□ 3.03
CPNE7-203ENST00000525982 FBXO41Q8TF61 875 aa34■■■■□ 3.03
CPNE7-203ENST00000525982 VPS8Q8N3P4 1428 aa33.99■■■■□ 3.03
CPNE7-203ENST00000525982 SETD1BQ9UPS6 1966 aaKnown RBP33.97■■■■□ 3.03
CPNE7-203ENST00000525982 SYCP2Q9BX26 1530 aa33.94■■■■□ 3.02
CPNE7-203ENST00000525982 PLEKHH2Q8IVE3 1493 aa33.92■■■■□ 3.02
CPNE7-203ENST00000525982 CEBPAP49715 358 aaPredicted RBP33.91■■■■□ 3.02
CPNE7-203ENST00000525982 ZNF777Q9ULD5 760 aaPredicted RBP33.91■■■■□ 3.02
CPNE7-203ENST00000525982 C3P01024 1663 aa33.9■■■■□ 3.02
CPNE7-203ENST00000525982 KIAA1107Q9UPP5 1409 aa33.9■■■■□ 3.02
CPNE7-203ENST00000525982 MTUS2Q5JR59 1369 aa33.9■■■■□ 3.02
CPNE7-203ENST00000525982 CCNB3Q8WWL7 1395 aa33.89■■■■□ 3.02
CPNE7-203ENST00000525982 UHRF1BP1Q6BDS2 1440 aa33.87■■■■□ 3.01
CPNE7-203ENST00000525982 ESF1Q9H501 851 aaKnown RBP33.86■■■■□ 3.01
CPNE7-203ENST00000525982 CFDP1Q9UEE9 299 aaPredicted RBP33.86■■■■□ 3.01
CPNE7-203ENST00000525982 CNTLNQ9NXG0 1405 aa33.85■■■■□ 3.01
CPNE7-203ENST00000525982 EHBP1L1Q8N3D4 1523 aa33.84■■■■□ 3.01
CPNE7-203ENST00000525982 SPAG9O60271 1321 aaKnown RBP33.84■■■■□ 3.01
CPNE7-203ENST00000525982 ATP7AQ04656 1500 aa33.84■■■■□ 3.01
CPNE7-203ENST00000525982 INO80Q9ULG1 1556 aaPredicted RBP33.83■■■■□ 3.01
CPNE7-203ENST00000525982 HNRNPMP52272 730 aaKnown RBP eCLIP33.81■■■■□ 3
CPNE7-203ENST00000525982 TIAM1Q13009 1591 aa33.79■■■■□ 3
CPNE7-203ENST00000525982 MROH2AA6NES4 1674 aa33.79■■■■□ 3
CPNE7-203ENST00000525982 SUPT6HQ7KZ85 1726 aaKnown RBP33.77■■■■□ 3
CPNE7-203ENST00000525982 STRCQ7RTU9 1775 aa33.76■■■■□ 3
CPNE7-203ENST00000525982 PLXNC1O60486 1568 aa33.76■■■□□ 2.99
CPNE7-203ENST00000525982 MAP3K1Q13233 1512 aa33.75■■■□□ 2.99
CPNE7-203ENST00000525982 DMRT2Q9Y5R5 561 aa33.72■■■□□ 2.99
CPNE7-203ENST00000525982 ADGBQ8N7X0 1667 aa33.71■■■□□ 2.99
CPNE7-203ENST00000525982 A2MP01023 1474 aa33.7■■■□□ 2.99
CPNE7-203ENST00000525982 APLP2Q06481 763 aa33.7■■■□□ 2.99
CPNE7-203ENST00000525982 NPATQ14207 1427 aa33.67■■■□□ 2.98
CPNE7-203ENST00000525982 CERKQ8TCT0 537 aa33.66■■■□□ 2.98
CPNE7-203ENST00000525982 MBD5Q9P267 1494 aa33.64■■■□□ 2.98
CPNE7-203ENST00000525982 CLTCQ00610 1675 aaKnown RBP33.63■■■□□ 2.97
CPNE7-203ENST00000525982 ZMYM3Q14202 1370 aa33.61■■■□□ 2.97
CPNE7-203ENST00000525982 ZNF644Q9H582 1327 aaPredicted RBP33.61■■■□□ 2.97
CPNE7-203ENST00000525982 RTEL1-TNFRSF6BF6WH68 1400 aa33.61■■■□□ 2.97
CPNE7-203ENST00000525982 PTPRTO14522 1441 aa33.59■■■□□ 2.97
CPNE7-203ENST00000525982 NCOA2Q15596 1464 aa33.58■■■□□ 2.97
CPNE7-203ENST00000525982 PPP6R1Q9UPN7 881 aa33.56■■■□□ 2.96
CPNE7-203ENST00000525982 NCOA1Q15788 1441 aa33.53■■■□□ 2.96
CPNE7-203ENST00000525982 CAMSAP2Q08AD1 1489 aa33.52■■■□□ 2.96
CPNE7-203ENST00000525982 CCDC141Q6ZP82 1450 aa33.52■■■□□ 2.96
CPNE7-203ENST00000525982 LRRC9Q6ZRR7 1453 aa33.51■■■□□ 2.96
CPNE7-203ENST00000525982 ZNF142P52746 1687 aaPredicted RBP33.51■■■□□ 2.95
CPNE7-203ENST00000525982 GGT6Q6P531 493 aa33.5■■■□□ 2.95
CPNE7-203ENST00000525982 MYO3AQ8NEV4 1616 aa33.5■■■□□ 2.95
CPNE7-203ENST00000525982 RSPH4AQ5TD94 716 aa33.49■■■□□ 2.95
CPNE7-203ENST00000525982 DHX29Q7Z478 1369 aaKnown RBP33.47■■■□□ 2.95
CPNE7-203ENST00000525982 CAMSAP1Q5T5Y3 1602 aa33.47■■■□□ 2.95
CPNE7-203ENST00000525982 PTPRKQ15262 1439 aa33.46■■■□□ 2.95
CPNE7-203ENST00000525982 ARHGEF5Q12774 1597 aa33.45■■■□□ 2.95
CPNE7-203ENST00000525982 FAM135AQ9P2D6 1515 aa33.43■■■□□ 2.94
CPNE7-203ENST00000525982 CEP170BQ9Y4F5 1589 aaPredicted RBP33.42■■■□□ 2.94
CPNE7-203ENST00000525982 PLA2R1Q13018 1463 aa33.38■■■□□ 2.93
CPNE7-203ENST00000525982 KANK4Q5T7N3 995 aaPredicted RBP33.37■■■□□ 2.93
CPNE7-203ENST00000525982 LTBP4Q8N2S1 1624 aa33.36■■■□□ 2.93
CPNE7-203ENST00000525982 KDM5DQ9BY66 1539 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms