RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 RRP7BPQ9NSQ0 103 aa10.96□□□□□ -0.66
BDNF-213ENST00000525950 WDR62O43379 1518 aa10.95□□□□□ -0.66
BDNF-213ENST00000525950 TDRD9Q8NDG6 1382 aaKnown RBP10.95□□□□□ -0.66
BDNF-213ENST00000525950 TARBP1Q13395 1621 aaKnown RBP10.94□□□□□ -0.66
BDNF-213ENST00000525950 DNMT1P26358 1616 aaKnown RBP10.94□□□□□ -0.66
BDNF-213ENST00000525950 SMG6Q86US8 1419 aaKnown RBP10.94□□□□□ -0.66
BDNF-213ENST00000525950 RNF123Q5XPI4 1314 aa10.94□□□□□ -0.66
BDNF-213ENST00000525950 C11orf95C9JLR9 678 aaPredicted RBP10.94□□□□□ -0.66
BDNF-213ENST00000525950 IQGAP2Q13576 1575 aa10.94□□□□□ -0.66
BDNF-213ENST00000525950 ERICH6Q7L0X2 663 aa10.94□□□□□ -0.66
BDNF-213ENST00000525950 ARID4BQ4LE39 1312 aaPredicted RBP10.93□□□□□ -0.66
BDNF-213ENST00000525950 PDS5BQ9NTI5 1447 aa10.93□□□□□ -0.66
BDNF-213ENST00000525950 CCDC184Q52MB2 194 aa10.93□□□□□ -0.66
BDNF-213ENST00000525950 DAPK1P53355 1430 aa10.93□□□□□ -0.66
BDNF-213ENST00000525950 MRS2Q9HD23 443 aa10.92□□□□□ -0.66
BDNF-213ENST00000525950 IRX6P78412 446 aaPredicted RBP10.91□□□□□ -0.66
BDNF-213ENST00000525950 KIF7Q2M1P5 1343 aa10.91□□□□□ -0.66
BDNF-213ENST00000525950 NBPF8Q3BBV2 869 aa10.91□□□□□ -0.66
BDNF-213ENST00000525950 MBD5Q9P267 1494 aa10.91□□□□□ -0.66
BDNF-213ENST00000525950 ABCC5O15440 1437 aa10.9□□□□□ -0.66
BDNF-213ENST00000525950 CHIC2Q9UKJ5 165 aa10.9□□□□□ -0.66
BDNF-213ENST00000525950 PBRM1Q86U86 1689 aa10.89□□□□□ -0.67
BDNF-213ENST00000525950 DHX29Q7Z478 1369 aaKnown RBP10.89□□□□□ -0.67
BDNF-213ENST00000525950 ADAMTS12P58397 1594 aa10.89□□□□□ -0.67
BDNF-213ENST00000525950 CDK13Q14004 1512 aaKnown RBP10.88□□□□□ -0.67
BDNF-213ENST00000525950 FAM9BQ8IZU0 186 aa10.88□□□□□ -0.67
BDNF-213ENST00000525950 NUDCQ9Y266 331 aa10.87□□□□□ -0.67
BDNF-213ENST00000525950 SLC24A1O60721 1099 aa10.86□□□□□ -0.67
BDNF-213ENST00000525950 ROCK2O75116 1388 aaKnown RBP10.86□□□□□ -0.67
BDNF-213ENST00000525950 PZPP20742 1482 aa10.86□□□□□ -0.67
BDNF-213ENST00000525950 ADGRL2O95490 1459 aa10.86□□□□□ -0.67
BDNF-213ENST00000525950 B4GALNT3Q6L9W6 998 aa10.86□□□□□ -0.67
BDNF-213ENST00000525950 KIF14Q15058 1648 aa10.85□□□□□ -0.67
BDNF-213ENST00000525950 UHRF1BP1Q6BDS2 1440 aa10.85□□□□□ -0.67
BDNF-213ENST00000525950 KTN1Q86UP2 1357 aaKnown RBP10.85□□□□□ -0.67
BDNF-213ENST00000525950 ADGBQ8N7X0 1667 aa10.84□□□□□ -0.67
BDNF-213ENST00000525950 KIAA1107Q9UPP5 1409 aa10.84□□□□□ -0.67
BDNF-213ENST00000525950 SLC4A1APQ9BWU0 796 aaKnown RBP10.83□□□□□ -0.68
BDNF-213ENST00000525950 NOP58Q9Y2X3 529 aaKnown RBP10.83□□□□□ -0.68
BDNF-213ENST00000525950 KDM5CP41229 1560 aa10.83□□□□□ -0.68
BDNF-213ENST00000525950 KIAA0556O60303 1618 aa10.82□□□□□ -0.68
BDNF-213ENST00000525950 BCORL1Q5H9F3 1711 aa10.82□□□□□ -0.68
BDNF-213ENST00000525950 FOXD1Q16676 465 aa10.82□□□□□ -0.68
BDNF-213ENST00000525950 KIAA0586Q9BVV6 1533 aa10.82□□□□□ -0.68
BDNF-213ENST00000525950 ITSN2Q9NZM3 1697 aa10.82□□□□□ -0.68
BDNF-213ENST00000525950 NUP153P49790 1475 aaKnown RBP10.81□□□□□ -0.68
BDNF-213ENST00000525950 RAPGEF6Q8TEU7 1601 aa10.81□□□□□ -0.68
BDNF-213ENST00000525950 USP47Q96K76 1375 aa10.81□□□□□ -0.68
BDNF-213ENST00000525950 RALGAPBQ86X10 1494 aa10.81□□□□□ -0.68
BDNF-213ENST00000525950 ARHGEF12Q9NZN5 1544 aa10.81□□□□□ -0.68
BDNF-213ENST00000525950 ADCY10Q96PN6 1610 aa10.81□□□□□ -0.68
BDNF-213ENST00000525950 DISP1Q96F81 1524 aa10.8□□□□□ -0.68
BDNF-213ENST00000525950 LRPPRCP42704 1394 aaKnown RBP10.8□□□□□ -0.68
BDNF-213ENST00000525950 CROCC2H7BZ55 1655 aa10.8□□□□□ -0.68
BDNF-213ENST00000525950 PNISRQ8TF01 805 aaKnown RBP10.8□□□□□ -0.68
BDNF-213ENST00000525950 TROQ12816 1431 aaPredicted RBP10.79□□□□□ -0.68
BDNF-213ENST00000525950 CAMSAP2Q08AD1 1489 aa10.78□□□□□ -0.68
BDNF-213ENST00000525950 BRD4O60885 1362 aaPredicted RBP10.78□□□□□ -0.68
BDNF-213ENST00000525950 DEKP35659 375 aaKnown RBP10.78□□□□□ -0.68
BDNF-213ENST00000525950 IPO9Q96P70 1041 aaKnown RBP10.78□□□□□ -0.68
BDNF-213ENST00000525950 KDM5DQ9BY66 1539 aa10.78□□□□□ -0.68
BDNF-213ENST00000525950 KIF15Q9NS87 1388 aa10.77□□□□□ -0.68
BDNF-213ENST00000525950 CCDC136Q96JN2 1154 aa10.77□□□□□ -0.68
BDNF-213ENST00000525950 INSRP06213 1382 aa10.77□□□□□ -0.69
BDNF-213ENST00000525950 ANP32AP39687 249 aaKnown RBP10.76□□□□□ -0.69
BDNF-213ENST00000525950 SHANK2Q9UPX8 1470 aa10.76□□□□□ -0.69
BDNF-213ENST00000525950 GPATCH8Q9UKJ3 1502 aaKnown RBP10.76□□□□□ -0.69
BDNF-213ENST00000525950 RALBP1Q15311 655 aa10.76□□□□□ -0.69
BDNF-213ENST00000525950 ANKRD30AQ9BXX3 1397 aa10.76□□□□□ -0.69
BDNF-213ENST00000525950 E9PCH4 1651 aa10.75□□□□□ -0.69
BDNF-213ENST00000525950 ZNF644Q9H582 1327 aaPredicted RBP10.75□□□□□ -0.69
BDNF-213ENST00000525950 ZMYM4Q5VZL5 1548 aa10.75□□□□□ -0.69
BDNF-213ENST00000525950 IFT140Q96RY7 1462 aa10.74□□□□□ -0.69
BDNF-213ENST00000525950 MRC2Q9UBG0 1479 aa10.74□□□□□ -0.69
BDNF-213ENST00000525950 PDE3BQ13370 1112 aa10.73□□□□□ -0.69
BDNF-213ENST00000525950 MYBBP1AQ9BQG0 1328 aaKnown RBP10.73□□□□□ -0.69
BDNF-213ENST00000525950 PAK3O75914 559 aaPredicted RBP10.73□□□□□ -0.69
BDNF-213ENST00000525950 TMC1Q8TDI8 760 aa10.73□□□□□ -0.69
BDNF-213ENST00000525950 TCERG1O14776 1098 aaKnown RBP10.72□□□□□ -0.69
BDNF-213ENST00000525950 CFDP1Q9UEE9 299 aaPredicted RBP10.72□□□□□ -0.69
BDNF-213ENST00000525950 PTPRGP23470 1445 aa10.72□□□□□ -0.69
BDNF-213ENST00000525950 ANKRD50Q9ULJ7 1429 aa10.72□□□□□ -0.69
BDNF-213ENST00000525950 CEP170Q5SW79 1584 aa10.72□□□□□ -0.69
BDNF-213ENST00000525950 PKD2Q13563 968 aa10.72□□□□□ -0.69
BDNF-213ENST00000525950 ZBTB47Q9UFB7 747 aaPredicted RBP10.71□□□□□ -0.69
BDNF-213ENST00000525950 MS4A1P11836 297 aa10.71□□□□□ -0.69
BDNF-213ENST00000525950 PRG4Q92954 1404 aaPredicted RBP10.71□□□□□ -0.7
BDNF-213ENST00000525950 GRIN2AQ12879 1464 aa10.7□□□□□ -0.7
BDNF-213ENST00000525950 RRP1P56182 461 aaKnown RBP10.7□□□□□ -0.7
BDNF-213ENST00000525950 WASHC2CQ9Y4E1 1318 aa10.69□□□□□ -0.7
BDNF-213ENST00000525950 CARD11Q9BXL7 1154 aa10.68□□□□□ -0.7
BDNF-213ENST00000525950 PARD3Q8TEW0 1356 aa10.68□□□□□ -0.7
BDNF-213ENST00000525950 USP35Q9P2H5 1018 aa10.68□□□□□ -0.7
BDNF-213ENST00000525950 LAMC1P11047 1609 aa10.68□□□□□ -0.7
BDNF-213ENST00000525950 CDC42BPAQ5VT25 1732 aa10.67□□□□□ -0.7
BDNF-213ENST00000525950 ABCC10Q5T3U5 1492 aa10.67□□□□□ -0.7
BDNF-213ENST00000525950 ARHGEF5Q12774 1597 aa10.67□□□□□ -0.7
BDNF-213ENST00000525950 NLRP13Q86W25 1043 aa10.67□□□□□ -0.7
BDNF-213ENST00000525950 RTL5Q5HYW3 569 aaPredicted RBP10.66□□□□□ -0.7
BDNF-213ENST00000525950 RCAN3Q9UKA8 241 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms