RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 HRCP23327 699 aa13.14□□□□□ -0.31
PABPC4-220ENST00000525669 ZNF777Q9ULD5 760 aaPredicted RBP13.14□□□□□ -0.31
PABPC4-220ENST00000525669 CROCC2H7BZ55 1655 aa13.14□□□□□ -0.31
PABPC4-220ENST00000525669 WDR7Q9Y4E6 1490 aa13.13□□□□□ -0.31
PABPC4-220ENST00000525669 CFDP1Q9UEE9 299 aaPredicted RBP13.13□□□□□ -0.31
PABPC4-220ENST00000525669 SAMD9LQ8IVG5 1584 aa13.12□□□□□ -0.31
PABPC4-220ENST00000525669 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
PABPC4-220ENST00000525669 ASXL2Q76L83 1435 aa13.12□□□□□ -0.31
PABPC4-220ENST00000525669 CCER1Q8TC90 406 aaPredicted RBP13.11□□□□□ -0.31
PABPC4-220ENST00000525669 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
PABPC4-220ENST00000525669 GCC2Q8IWJ2 1684 aa13.1□□□□□ -0.31
PABPC4-220ENST00000525669 ADGBQ8N7X0 1667 aa13.1□□□□□ -0.31
PABPC4-220ENST00000525669 CHIC2Q9UKJ5 165 aa13.1□□□□□ -0.31
PABPC4-220ENST00000525669 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
PABPC4-220ENST00000525669 DAPK1P53355 1430 aa13.09□□□□□ -0.31
PABPC4-220ENST00000525669 ABCA9Q8IUA7 1624 aa13.09□□□□□ -0.31
PABPC4-220ENST00000525669 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.32
PABPC4-220ENST00000525669 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
PABPC4-220ENST00000525669 ABCC5O15440 1437 aa13.07□□□□□ -0.32
PABPC4-220ENST00000525669 KDM6BO15054 1643 aa13.06□□□□□ -0.32
PABPC4-220ENST00000525669 PLPPR3Q6T4P5 718 aa13.06□□□□□ -0.32
PABPC4-220ENST00000525669 RRP7BPQ9NSQ0 103 aa13.05□□□□□ -0.32
PABPC4-220ENST00000525669 SYCP2Q9BX26 1530 aa13.04□□□□□ -0.32
PABPC4-220ENST00000525669 PLCH2O75038 1416 aa13.04□□□□□ -0.32
PABPC4-220ENST00000525669 ARHGEF5Q12774 1597 aa13.03□□□□□ -0.32
PABPC4-220ENST00000525669 HNRNPMP52272 730 aaKnown RBP eCLIP13.03□□□□□ -0.32
PABPC4-220ENST00000525669 NAIPQ13075 1403 aa13.03□□□□□ -0.32
PABPC4-220ENST00000525669 HFM1A2PYH4 1435 aa13.02□□□□□ -0.33
PABPC4-220ENST00000525669 DHX57Q6P158 1386 aaKnown RBP13.01□□□□□ -0.33
PABPC4-220ENST00000525669 AKNAQ7Z591 1439 aa13.01□□□□□ -0.33
PABPC4-220ENST00000525669 MAPKBP1O60336 1514 aa13.01□□□□□ -0.33
PABPC4-220ENST00000525669 ABCC1P33527 1531 aa13□□□□□ -0.33
PABPC4-220ENST00000525669 ARHGEF12Q9NZN5 1544 aa13□□□□□ -0.33
PABPC4-220ENST00000525669 MBD5Q9P267 1494 aa12.99□□□□□ -0.33
PABPC4-220ENST00000525669 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
PABPC4-220ENST00000525669 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
PABPC4-220ENST00000525669 EFCAB2Q5VUJ9 269 aa12.97□□□□□ -0.33
PABPC4-220ENST00000525669 MAP3K4Q9Y6R4 1608 aa12.97□□□□□ -0.33
PABPC4-220ENST00000525669 TSPOAP1O95153 1857 aa12.97□□□□□ -0.33
PABPC4-220ENST00000525669 FANCAO15360 1455 aa12.97□□□□□ -0.33
PABPC4-220ENST00000525669 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
PABPC4-220ENST00000525669 C9orf84Q5VXU9 1444 aa12.96□□□□□ -0.33
PABPC4-220ENST00000525669 ROCK1Q13464 1354 aa12.96□□□□□ -0.33
PABPC4-220ENST00000525669 ZEB1P37275 1124 aaPredicted RBP12.96□□□□□ -0.33
PABPC4-220ENST00000525669 FOXD1Q16676 465 aa12.96□□□□□ -0.33
PABPC4-220ENST00000525669 ADGRL2O95490 1459 aa12.96□□□□□ -0.34
PABPC4-220ENST00000525669 PLEKHH2Q8IVE3 1493 aa12.96□□□□□ -0.34
PABPC4-220ENST00000525669 DIP2BQ9P265 1576 aa12.95□□□□□ -0.34
PABPC4-220ENST00000525669 MAST1Q9Y2H9 1570 aa12.95□□□□□ -0.34
PABPC4-220ENST00000525669 KIF13AQ9H1H9 1805 aa12.95□□□□□ -0.34
PABPC4-220ENST00000525669 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
PABPC4-220ENST00000525669 NCOA1Q15788 1441 aa12.94□□□□□ -0.34
PABPC4-220ENST00000525669 CD109Q6YHK3 1445 aa12.94□□□□□ -0.34
PABPC4-220ENST00000525669 TRAPPC8Q9Y2L5 1435 aa12.94□□□□□ -0.34
PABPC4-220ENST00000525669 KIAA1107Q9UPP5 1409 aa12.93□□□□□ -0.34
PABPC4-220ENST00000525669 ANKRD30AQ9BXX3 1397 aa12.93□□□□□ -0.34
PABPC4-220ENST00000525669 ADGRL1O94910 1474 aa12.92□□□□□ -0.34
PABPC4-220ENST00000525669 TSPY4P0CV99 314 aa12.92□□□□□ -0.34
PABPC4-220ENST00000525669 TSPY10P0CW01 314 aa12.92□□□□□ -0.34
PABPC4-220ENST00000525669 GLI2P10070 1586 aa12.92□□□□□ -0.34
PABPC4-220ENST00000525669 PLXNC1O60486 1568 aa12.9□□□□□ -0.34
PABPC4-220ENST00000525669 PPRC1Q5VV67 1664 aaKnown RBP12.9□□□□□ -0.34
PABPC4-220ENST00000525669 TRIM52Q96A61 297 aa12.9□□□□□ -0.34
PABPC4-220ENST00000525669 SCAPERQ9BY12 1400 aa12.89□□□□□ -0.35
PABPC4-220ENST00000525669 RSPH4AQ5TD94 716 aa12.88□□□□□ -0.35
PABPC4-220ENST00000525669 KIF15Q9NS87 1388 aa12.88□□□□□ -0.35
PABPC4-220ENST00000525669 INO80Q9ULG1 1556 aaPredicted RBP12.88□□□□□ -0.35
PABPC4-220ENST00000525669 ZFYVE16Q7Z3T8 1539 aa12.88□□□□□ -0.35
PABPC4-220ENST00000525669 FAM69CQ0P6D2 419 aa12.87□□□□□ -0.35
PABPC4-220ENST00000525669 AFAP1Q8N556 730 aa12.87□□□□□ -0.35
PABPC4-220ENST00000525669 ANKRD50Q9ULJ7 1429 aa12.87□□□□□ -0.35
PABPC4-220ENST00000525669 ATP7AQ04656 1500 aa12.86□□□□□ -0.35
PABPC4-220ENST00000525669 KIDINS220Q9ULH0 1771 aa12.86□□□□□ -0.35
PABPC4-220ENST00000525669 DENND4BO75064 1496 aaPredicted RBP12.85□□□□□ -0.35
PABPC4-220ENST00000525669 RICTORQ6R327 1708 aa12.85□□□□□ -0.35
PABPC4-220ENST00000525669 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
PABPC4-220ENST00000525669 NEO1Q92859 1461 aa12.84□□□□□ -0.35
PABPC4-220ENST00000525669 SIN3AQ96ST3 1273 aa12.83□□□□□ -0.36
PABPC4-220ENST00000525669 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
PABPC4-220ENST00000525669 PZPP20742 1482 aa12.83□□□□□ -0.36
PABPC4-220ENST00000525669 CLSPNQ9HAW4 1339 aa12.83□□□□□ -0.36
PABPC4-220ENST00000525669 DUOX2Q9NRD8 1548 aa12.83□□□□□ -0.36
PABPC4-220ENST00000525669 UNC13BO14795 1591 aa12.82□□□□□ -0.36
PABPC4-220ENST00000525669 KDM5CP41229 1560 aa12.81□□□□□ -0.36
PABPC4-220ENST00000525669 HECW2Q9P2P5 1572 aa12.81□□□□□ -0.36
PABPC4-220ENST00000525669 POGZQ7Z3K3 1410 aa12.81□□□□□ -0.36
PABPC4-220ENST00000525669 ZNF518AQ6AHZ1 1483 aa12.81□□□□□ -0.36
PABPC4-220ENST00000525669 NEUROD1Q13562 356 aa12.81□□□□□ -0.36
PABPC4-220ENST00000525669 MPHOSPH9Q99550 1183 aa12.81□□□□□ -0.36
PABPC4-220ENST00000525669 FRMPD1Q5SYB0 1578 aa12.81□□□□□ -0.36
PABPC4-220ENST00000525669 RTEL1-TNFRSF6BF6WH68 1400 aa12.8□□□□□ -0.36
PABPC4-220ENST00000525669 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
PABPC4-220ENST00000525669 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
PABPC4-220ENST00000525669 RAPGEF3O95398 923 aa12.77□□□□□ -0.37
PABPC4-220ENST00000525669 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
PABPC4-220ENST00000525669 NUP155O75694 1391 aa12.77□□□□□ -0.37
PABPC4-220ENST00000525669 ERBINQ96RT1 1412 aa12.77□□□□□ -0.37
PABPC4-220ENST00000525669 IQGAP3Q86VI3 1631 aa12.77□□□□□ -0.37
PABPC4-220ENST00000525669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.378e-9■■■□□ 14.9
PABPC4-220ENST00000525669 TEX14Q8IWB6 1497 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms