RNA–Protein interactions for RNA: ENST00000525648.1

SNX15-204, Transcript of sorting nexin 15, humanhuman

TSL 3

Gene SNX15, Length 312 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15-204ENST00000525648 FRMPD1Q5SYB0 1578 aa29.49■■■□□ 2.31
SNX15-204ENST00000525648 ADGRL1O94910 1474 aa29.48■■■□□ 2.31
SNX15-204ENST00000525648 RICTORQ6R327 1708 aa29.48■■■□□ 2.31
SNX15-204ENST00000525648 MAP3K1Q13233 1512 aa29.47■■■□□ 2.31
SNX15-204ENST00000525648 RAPGEF3O95398 923 aa29.45■■■□□ 2.31
SNX15-204ENST00000525648 GPATCH8Q9UKJ3 1502 aaKnown RBP29.42■■■□□ 2.3
SNX15-204ENST00000525648 SCAPERQ9BY12 1400 aa29.42■■■□□ 2.3
SNX15-204ENST00000525648 SUPT6HQ7KZ85 1726 aaKnown RBP29.42■■■□□ 2.3
SNX15-204ENST00000525648 LRRC9Q6ZRR7 1453 aa29.39■■■□□ 2.3
SNX15-204ENST00000525648 CCNB3Q8WWL7 1395 aa29.39■■■□□ 2.29
SNX15-204ENST00000525648 POGZQ7Z3K3 1410 aa29.38■■■□□ 2.29
SNX15-204ENST00000525648 ZMYM4Q5VZL5 1548 aa29.38■■■□□ 2.29
SNX15-204ENST00000525648 ITSN2Q9NZM3 1697 aa29.37■■■□□ 2.29
SNX15-204ENST00000525648 ABCC1P33527 1531 aa29.36■■■□□ 2.29
SNX15-204ENST00000525648 NCOA2Q15596 1464 aa29.34■■■□□ 2.29
SNX15-204ENST00000525648 SAMD9LQ8IVG5 1584 aa29.31■■■□□ 2.28
SNX15-204ENST00000525648 ARHGEF40Q8TER5 1519 aa29.31■■■□□ 2.28
SNX15-204ENST00000525648 ZNF518AQ6AHZ1 1483 aa29.31■■■□□ 2.28
SNX15-204ENST00000525648 APLP2Q06481 763 aa29.3■■■□□ 2.28
SNX15-204ENST00000525648 MAGI2Q86UL8 1455 aa29.29■■■□□ 2.28
SNX15-204ENST00000525648 CFDP1Q9UEE9 299 aaPredicted RBP29.29■■■□□ 2.28
SNX15-204ENST00000525648 KDM5CP41229 1560 aa29.28■■■□□ 2.28
SNX15-204ENST00000525648 ZFYVE16Q7Z3T8 1539 aa29.26■■■□□ 2.27
SNX15-204ENST00000525648 ARHGEF12Q9NZN5 1544 aa29.26■■■□□ 2.27
SNX15-204ENST00000525648 KANK4Q5T7N3 995 aaPredicted RBP29.26■■■□□ 2.27
SNX15-204ENST00000525648 PLEKHH2Q8IVE3 1493 aa29.25■■■□□ 2.27
SNX15-204ENST00000525648 ZNF777Q9ULD5 760 aaPredicted RBP29.25■■■□□ 2.27
SNX15-204ENST00000525648 SYCP2Q9BX26 1530 aa29.23■■■□□ 2.27
SNX15-204ENST00000525648 KIAA1107Q9UPP5 1409 aa29.22■■■□□ 2.27
SNX15-204ENST00000525648 TRAPPC8Q9Y2L5 1435 aa29.21■■■□□ 2.27
SNX15-204ENST00000525648 HECW2Q9P2P5 1572 aa29.21■■■□□ 2.27
SNX15-204ENST00000525648 AFAP1Q8N556 730 aa29.2■■■□□ 2.26
SNX15-204ENST00000525648 YEATS2Q9ULM3 1422 aa29.2■■■□□ 2.26
SNX15-204ENST00000525648 KDM4FA0A1W2PPD8 638 aa29.17■■■□□ 2.26
SNX15-204ENST00000525648 MLH3Q9UHC1 1453 aa29.16■■■□□ 2.26
SNX15-204ENST00000525648 AEBP2Q6ZN18 517 aaPredicted RBP29.12■■■□□ 2.25
SNX15-204ENST00000525648 HNRNPMP52272 730 aaKnown RBP eCLIP29.11■■■□□ 2.25
SNX15-204ENST00000525648 ZNF644Q9H582 1327 aaPredicted RBP29.11■■■□□ 2.25
SNX15-204ENST00000525648 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
SNX15-204ENST00000525648 ATP10AO60312 1499 aa29.1■■■□□ 2.25
SNX15-204ENST00000525648 CAMSAP2Q08AD1 1489 aa29.1■■■□□ 2.25
SNX15-204ENST00000525648 KIDINS220Q9ULH0 1771 aa29.1■■■□□ 2.25
SNX15-204ENST00000525648 C9orf84Q5VXU9 1444 aa29.1■■■□□ 2.25
SNX15-204ENST00000525648 DIP2CQ9Y2E4 1556 aa29.09■■■□□ 2.25
SNX15-204ENST00000525648 ABCA6Q8N139 1617 aa29.09■■■□□ 2.25
SNX15-204ENST00000525648 MBD5Q9P267 1494 aa29.08■■■□□ 2.25
SNX15-204ENST00000525648 BCORL1Q5H9F3 1711 aa29.07■■■□□ 2.24
SNX15-204ENST00000525648 MIA2Q96PC5 1412 aa29.07■■■□□ 2.24
SNX15-204ENST00000525648 SIGLEC1Q9BZZ2 1709 aa29.07■■■□□ 2.24
SNX15-204ENST00000525648 MYT1LQ9UL68 1186 aa29.07■■■□□ 2.24
SNX15-204ENST00000525648 ARID4BQ4LE39 1312 aaPredicted RBP29.05■■■□□ 2.24
SNX15-204ENST00000525648 REREQ9P2R6 1566 aa29.05■■■□□ 2.24
SNX15-204ENST00000525648 INO80Q9ULG1 1556 aaPredicted RBP29.05■■■□□ 2.24
SNX15-204ENST00000525648 ADAMTSL3P82987 1691 aa29.03■■■□□ 2.24
SNX15-204ENST00000525648 SPAG9O60271 1321 aaKnown RBP29.03■■■□□ 2.24
SNX15-204ENST00000525648 ATP7AQ04656 1500 aa29.03■■■□□ 2.24
SNX15-204ENST00000525648 ARHGEF5Q12774 1597 aa29.01■■■□□ 2.24
SNX15-204ENST00000525648 CCDC141Q6ZP82 1450 aa29.01■■■□□ 2.23
SNX15-204ENST00000525648 RSPH4AQ5TD94 716 aa28.98■■■□□ 2.23
SNX15-204ENST00000525648 PTPN23Q9H3S7 1636 aa28.95■■■□□ 2.23
SNX15-204ENST00000525648 RTEL1-TNFRSF6BF6WH68 1400 aa28.94■■■□□ 2.22
SNX15-204ENST00000525648 MADDQ8WXG6 1647 aa28.94■■■□□ 2.22
SNX15-204ENST00000525648 AGLP35573 1532 aa28.93■■■□□ 2.22
SNX15-204ENST00000525648 FGD6Q6ZV73 1430 aa28.93■■■□□ 2.22
SNX15-204ENST00000525648 ADGBQ8N7X0 1667 aa28.91■■■□□ 2.22
SNX15-204ENST00000525648 TCOF1Q13428 1488 aaKnown RBP28.89■■■□□ 2.22
SNX15-204ENST00000525648 FER1L4A9Z1Z3 1794 aa28.88■■■□□ 2.21
SNX15-204ENST00000525648 PLXNC1O60486 1568 aa28.88■■■□□ 2.21
SNX15-204ENST00000525648 MAST1Q9Y2H9 1570 aa28.87■■■□□ 2.21
SNX15-204ENST00000525648 A2MP01023 1474 aa28.86■■■□□ 2.21
SNX15-204ENST00000525648 RIMS1Q86UR5 1692 aaKnown RBP28.86■■■□□ 2.21
SNX15-204ENST00000525648 TSPY4P0CV99 314 aa28.85■■■□□ 2.21
SNX15-204ENST00000525648 TSPY10P0CW01 314 aa28.85■■■□□ 2.21
SNX15-204ENST00000525648 MLECQ14165 292 aa28.85■■■□□ 2.21
SNX15-204ENST00000525648 PTPRMP28827 1452 aa28.84■■■□□ 2.21
SNX15-204ENST00000525648 CROCC2H7BZ55 1655 aa28.83■■■□□ 2.21
SNX15-204ENST00000525648 DNMT1P26358 1616 aaKnown RBP28.8■■■□□ 2.2
SNX15-204ENST00000525648 SHANK2Q9UPX8 1470 aa28.78■■■□□ 2.2
SNX15-204ENST00000525648 ABCC5O15440 1437 aa28.77■■■□□ 2.2
SNX15-204ENST00000525648 DAPK1P53355 1430 aa28.76■■■□□ 2.19
SNX15-204ENST00000525648 DHX29Q7Z478 1369 aaKnown RBP28.75■■■□□ 2.19
SNX15-204ENST00000525648 PPARGC1BQ86YN6 1023 aaKnown RBP28.73■■■□□ 2.19
SNX15-204ENST00000525648 FAM50AQ14320 339 aaKnown RBP28.68■■■□□ 2.18
SNX15-204ENST00000525648 CNTLNQ9NXG0 1405 aa28.66■■■□□ 2.18
SNX15-204ENST00000525648 ESF1Q9H501 851 aaKnown RBP28.64■■■□□ 2.18
SNX15-204ENST00000525648 DUOX2Q9NRD8 1548 aa28.64■■■□□ 2.17
SNX15-204ENST00000525648 EIF2AK4Q9P2K8 1649 aaKnown RBP28.63■■■□□ 2.17
SNX15-204ENST00000525648 MROH2AA6NES4 1674 aa28.63■■■□□ 2.17
SNX15-204ENST00000525648 C3P01024 1663 aa28.61■■■□□ 2.17
SNX15-204ENST00000525648 GGT6Q6P531 493 aa28.6■■■□□ 2.17
SNX15-204ENST00000525648 PPP6R1Q9UPN7 881 aa28.6■■■□□ 2.17
SNX15-204ENST00000525648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.6■■■□□ 2.17
SNX15-204ENST00000525648 KIF15Q9NS87 1388 aa28.6■■■□□ 2.17
SNX15-204ENST00000525648 CLTCQ00610 1675 aaKnown RBP28.59■■■□□ 2.17
SNX15-204ENST00000525648 KIF3BO15066 747 aa28.59■■■□□ 2.17
SNX15-204ENST00000525648 ADGRL2O95490 1459 aa28.59■■■□□ 2.17
SNX15-204ENST00000525648 ANKRD30AQ9BXX3 1397 aa28.58■■■□□ 2.17
SNX15-204ENST00000525648 FAM135AQ9P2D6 1515 aa28.58■■■□□ 2.17
SNX15-204ENST00000525648 RNF17Q9BXT8 1623 aaKnown RBP28.58■■■□□ 2.17
SNX15-204ENST00000525648 PLPPR3Q6T4P5 718 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms