RNA–Protein interactions for RNA: ENST00000525599.1

CCDC17-208, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-208ENST00000525599 FANCAO15360 1455 aa34.43■■■■□ 3.1
CCDC17-208ENST00000525599 ITSN2Q9NZM3 1697 aa34.41■■■■□ 3.1
CCDC17-208ENST00000525599 CDC42BPBQ9Y5S2 1711 aa34.4■■■■□ 3.1
CCDC17-208ENST00000525599 ARHGAP5Q13017 1502 aa34.4■■■■□ 3.1
CCDC17-208ENST00000525599 EFCAB2Q5VUJ9 269 aa34.39■■■■□ 3.1
CCDC17-208ENST00000525599 AKNAQ7Z591 1439 aa34.34■■■■□ 3.09
CCDC17-208ENST00000525599 KDM6BO15054 1643 aa34.33■■■■□ 3.09
CCDC17-208ENST00000525599 CFDP1Q9UEE9 299 aaPredicted RBP34.3■■■■□ 3.08
CCDC17-208ENST00000525599 MYOM3Q5VTT5 1437 aa34.26■■■■□ 3.08
CCDC17-208ENST00000525599 ADGRL1O94910 1474 aa34.26■■■■□ 3.08
CCDC17-208ENST00000525599 MIA2Q96PC5 1412 aa34.23■■■■□ 3.07
CCDC17-208ENST00000525599 COL17A1Q9UMD9 1497 aaPredicted RBP34.23■■■■□ 3.07
CCDC17-208ENST00000525599 PLEKHH2Q8IVE3 1493 aa34.22■■■■□ 3.07
CCDC17-208ENST00000525599 SAMD9LQ8IVG5 1584 aa34.21■■■■□ 3.07
CCDC17-208ENST00000525599 ABCC1P33527 1531 aa34.21■■■■□ 3.07
CCDC17-208ENST00000525599 DENND4BO75064 1496 aaPredicted RBP34.2■■■■□ 3.07
CCDC17-208ENST00000525599 SCAPERQ9BY12 1400 aa34.19■■■■□ 3.06
CCDC17-208ENST00000525599 KIAA1107Q9UPP5 1409 aa34.18■■■■□ 3.06
CCDC17-208ENST00000525599 ZNF777Q9ULD5 760 aaPredicted RBP34.15■■■■□ 3.06
CCDC17-208ENST00000525599 POGZQ7Z3K3 1410 aa34.14■■■■□ 3.06
CCDC17-208ENST00000525599 RICTORQ6R327 1708 aa34.13■■■■□ 3.05
CCDC17-208ENST00000525599 FGD6Q6ZV73 1430 aa34.11■■■■□ 3.05
CCDC17-208ENST00000525599 FRMPD1Q5SYB0 1578 aa34.11■■■■□ 3.05
CCDC17-208ENST00000525599 CAMSAP2Q08AD1 1489 aa34.11■■■■□ 3.05
CCDC17-208ENST00000525599 ZNF518AQ6AHZ1 1483 aa34.1■■■■□ 3.05
CCDC17-208ENST00000525599 SYCP2Q9BX26 1530 aa34.09■■■■□ 3.05
CCDC17-208ENST00000525599 ARHGEF12Q9NZN5 1544 aa34.09■■■■□ 3.05
CCDC17-208ENST00000525599 RAPGEF3O95398 923 aa34.07■■■■□ 3.04
CCDC17-208ENST00000525599 PPARGC1BQ86YN6 1023 aaKnown RBP34.06■■■■□ 3.04
CCDC17-208ENST00000525599 ZNF644Q9H582 1327 aaPredicted RBP34.06■■■■□ 3.04
CCDC17-208ENST00000525599 ZMYM4Q5VZL5 1548 aa34.06■■■■□ 3.04
CCDC17-208ENST00000525599 PTPN23Q9H3S7 1636 aa34.04■■■■□ 3.04
CCDC17-208ENST00000525599 TCOF1Q13428 1488 aaKnown RBP34.04■■■■□ 3.04
CCDC17-208ENST00000525599 KDM5CP41229 1560 aa34.04■■■■□ 3.04
CCDC17-208ENST00000525599 MBD5Q9P267 1494 aa34.03■■■■□ 3.04
CCDC17-208ENST00000525599 TRAPPC8Q9Y2L5 1435 aa34.02■■■■□ 3.04
CCDC17-208ENST00000525599 RSPH4AQ5TD94 716 aa34.01■■■■□ 3.03
CCDC17-208ENST00000525599 MAGI2Q86UL8 1455 aa34.01■■■■□ 3.03
CCDC17-208ENST00000525599 ARHGEF5Q12774 1597 aa34■■■■□ 3.03
CCDC17-208ENST00000525599 HNRNPMP52272 730 aaKnown RBP eCLIP33.99■■■■□ 3.03
CCDC17-208ENST00000525599 AFAP1Q8N556 730 aa33.96■■■■□ 3.03
CCDC17-208ENST00000525599 CCDC141Q6ZP82 1450 aa33.95■■■■□ 3.03
CCDC17-208ENST00000525599 MLH3Q9UHC1 1453 aa33.94■■■■□ 3.02
CCDC17-208ENST00000525599 HECW2Q9P2P5 1572 aa33.93■■■■□ 3.02
CCDC17-208ENST00000525599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.89■■■■□ 3.02
CCDC17-208ENST00000525599 ZFYVE16Q7Z3T8 1539 aa33.89■■■■□ 3.02
CCDC17-208ENST00000525599 ARHGEF40Q8TER5 1519 aa33.88■■■■□ 3.01
CCDC17-208ENST00000525599 RRBP1Q9P2E9 1410 aaKnown RBP33.88■■■■□ 3.01
CCDC17-208ENST00000525599 SPAG9O60271 1321 aaKnown RBP33.86■■■■□ 3.01
CCDC17-208ENST00000525599 DNMT1P26358 1616 aaKnown RBP33.85■■■■□ 3.01
CCDC17-208ENST00000525599 INO80Q9ULG1 1556 aaPredicted RBP33.85■■■■□ 3.01
CCDC17-208ENST00000525599 RTEL1-TNFRSF6BF6WH68 1400 aa33.84■■■■□ 3.01
CCDC17-208ENST00000525599 KIDINS220Q9ULH0 1771 aa33.83■■■■□ 3.01
CCDC17-208ENST00000525599 ATP7AQ04656 1500 aa33.82■■■■□ 3
CCDC17-208ENST00000525599 SHANK2Q9UPX8 1470 aa33.81■■■■□ 3
CCDC17-208ENST00000525599 TSPY4P0CV99 314 aa33.81■■■■□ 3
CCDC17-208ENST00000525599 TSPY10P0CW01 314 aa33.81■■■■□ 3
CCDC17-208ENST00000525599 FAM50AQ14320 339 aaKnown RBP33.81■■■■□ 3
CCDC17-208ENST00000525599 MAST1Q9Y2H9 1570 aa33.81■■■■□ 3
CCDC17-208ENST00000525599 DAPK1P53355 1430 aa33.8■■■■□ 3
CCDC17-208ENST00000525599 YEATS2Q9ULM3 1422 aa33.8■■■■□ 3
CCDC17-208ENST00000525599 CROCC2H7BZ55 1655 aa33.79■■■■□ 3
CCDC17-208ENST00000525599 ABCC5O15440 1437 aa33.79■■■■□ 3
CCDC17-208ENST00000525599 MYT1LQ9UL68 1186 aa33.77■■■■□ 3
CCDC17-208ENST00000525599 DIP2CQ9Y2E4 1556 aa33.76■■■□□ 2.99
CCDC17-208ENST00000525599 ATP10AO60312 1499 aa33.75■■■□□ 2.99
CCDC17-208ENST00000525599 C9orf84Q5VXU9 1444 aa33.75■■■□□ 2.99
CCDC17-208ENST00000525599 ABCA6Q8N139 1617 aa33.75■■■□□ 2.99
CCDC17-208ENST00000525599 REREQ9P2R6 1566 aa33.73■■■□□ 2.99
CCDC17-208ENST00000525599 PLXNC1O60486 1568 aa33.68■■■□□ 2.98
CCDC17-208ENST00000525599 ADGBQ8N7X0 1667 aa33.68■■■□□ 2.98
CCDC17-208ENST00000525599 ADGRL2O95490 1459 aa33.63■■■□□ 2.97
CCDC17-208ENST00000525599 A2MP01023 1474 aa33.61■■■□□ 2.97
CCDC17-208ENST00000525599 AGLP35573 1532 aa33.6■■■□□ 2.97
CCDC17-208ENST00000525599 ANKRD30AQ9BXX3 1397 aa33.59■■■□□ 2.97
CCDC17-208ENST00000525599 PTPRKQ15262 1439 aa33.58■■■□□ 2.97
CCDC17-208ENST00000525599 ROCK1Q13464 1354 aa33.56■■■□□ 2.96
CCDC17-208ENST00000525599 DHX29Q7Z478 1369 aaKnown RBP33.56■■■□□ 2.96
CCDC17-208ENST00000525599 NCOA1Q15788 1441 aa33.56■■■□□ 2.96
CCDC17-208ENST00000525599 SIGLEC1Q9BZZ2 1709 aa33.54■■■□□ 2.96
CCDC17-208ENST00000525599 DUOX2Q9NRD8 1548 aa33.54■■■□□ 2.96
CCDC17-208ENST00000525599 KIF15Q9NS87 1388 aa33.54■■■□□ 2.96
CCDC17-208ENST00000525599 CHIC2Q9UKJ5 165 aa33.52■■■□□ 2.96
CCDC17-208ENST00000525599 ARID4BQ4LE39 1312 aaPredicted RBP33.51■■■□□ 2.95
CCDC17-208ENST00000525599 ITGAEP38570 1179 aa33.49■■■□□ 2.95
CCDC17-208ENST00000525599 BCORL1Q5H9F3 1711 aa33.48■■■□□ 2.95
CCDC17-208ENST00000525599 EIF2AK4Q9P2K8 1649 aaKnown RBP33.46■■■□□ 2.95
CCDC17-208ENST00000525599 ERBINQ96RT1 1412 aa33.46■■■□□ 2.95
CCDC17-208ENST00000525599 RRP7BPQ9NSQ0 103 aa33.45■■■□□ 2.95
CCDC17-208ENST00000525599 ADAMTSL3P82987 1691 aa33.38■■■□□ 2.93
CCDC17-208ENST00000525599 ANKRD50Q9ULJ7 1429 aa33.36■■■□□ 2.93
CCDC17-208ENST00000525599 RNF17Q9BXT8 1623 aaKnown RBP33.34■■■□□ 2.93
CCDC17-208ENST00000525599 KIF3BO15066 747 aa33.34■■■□□ 2.93
CCDC17-208ENST00000525599 PPP6R1Q9UPN7 881 aa33.32■■■□□ 2.92
CCDC17-208ENST00000525599 HFM1A2PYH4 1435 aa33.32■■■□□ 2.92
CCDC17-208ENST00000525599 FAM135AQ9P2D6 1515 aa33.31■■■□□ 2.92
CCDC17-208ENST00000525599 GCC2Q8IWJ2 1684 aa33.3■■■□□ 2.92
CCDC17-208ENST00000525599 MLECQ14165 292 aa33.29■■■□□ 2.92
CCDC17-208ENST00000525599 NAIPQ13075 1403 aa33.28■■■□□ 2.92
CCDC17-208ENST00000525599 DEPDC5O75140 1603 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms