RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 WDR62O43379 1518 aa20.03■□□□□ 0.8
LTBP3-204ENST00000525443 A0A0U1RQG5 324 aaPredicted RBP20.01■□□□□ 0.79
LTBP3-204ENST00000525443 PBRM1Q86U86 1689 aa19.99■□□□□ 0.79
LTBP3-204ENST00000525443 FRAT1Q92837 279 aaPredicted RBP19.97■□□□□ 0.79
LTBP3-204ENST00000525443 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
LTBP3-204ENST00000525443 FAM43AQ8N2R8 423 aa19.96■□□□□ 0.79
LTBP3-204ENST00000525443 ADAMTS12P58397 1594 aa19.96■□□□□ 0.79
LTBP3-204ENST00000525443 RAB3GAP2Q9H2M9 1393 aa19.95■□□□□ 0.78
LTBP3-204ENST00000525443 PPM1GO15355 546 aaPredicted RBP19.94■□□□□ 0.78
LTBP3-204ENST00000525443 SAMD9Q5K651 1589 aa19.94■□□□□ 0.78
LTBP3-204ENST00000525443 IQGAP2Q13576 1575 aa19.93■□□□□ 0.78
LTBP3-204ENST00000525443 CFAP43Q8NDM7 1665 aa19.92■□□□□ 0.78
LTBP3-204ENST00000525443 SETD5Q9C0A6 1442 aa19.89■□□□□ 0.77
LTBP3-204ENST00000525443 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
LTBP3-204ENST00000525443 HSP90AA2PQ14568 343 aaPredicted RBP19.87■□□□□ 0.77
LTBP3-204ENST00000525443 DCAF11Q8TEB1 546 aa19.87■□□□□ 0.77
LTBP3-204ENST00000525443 GRIN2AQ12879 1464 aa19.86■□□□□ 0.77
LTBP3-204ENST00000525443 KIAA0586Q9BVV6 1533 aa19.85■□□□□ 0.77
LTBP3-204ENST00000525443 FGD6Q6ZV73 1430 aa19.85■□□□□ 0.77
LTBP3-204ENST00000525443 RBM10P98175 930 aaKnown RBP19.84■□□□□ 0.77
LTBP3-204ENST00000525443 THOC2Q8NI27 1593 aaKnown RBP19.83■□□□□ 0.77
LTBP3-204ENST00000525443 NCOA2Q15596 1464 aa19.83■□□□□ 0.76
LTBP3-204ENST00000525443 NFKBIBQ15653 356 aa19.83■□□□□ 0.76
LTBP3-204ENST00000525443 JPH4Q96JJ6 628 aa19.8■□□□□ 0.76
LTBP3-204ENST00000525443 MAPKBP1O60336 1514 aa19.8■□□□□ 0.76
LTBP3-204ENST00000525443 CHIC2Q9UKJ5 165 aa19.79■□□□□ 0.76
LTBP3-204ENST00000525443 RRAGDQ9NQL2 400 aaPredicted RBP19.79■□□□□ 0.76
LTBP3-204ENST00000525443 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
LTBP3-204ENST00000525443 MYOM3Q5VTT5 1437 aa19.78■□□□□ 0.76
LTBP3-204ENST00000525443 UGGT2Q9NYU1 1516 aa19.78■□□□□ 0.76
LTBP3-204ENST00000525443 SYNJ2O15056 1496 aa19.77■□□□□ 0.76
LTBP3-204ENST00000525443 EPRSP07814 1512 aaKnown RBP19.77■□□□□ 0.76
LTBP3-204ENST00000525443 CCDC18Q5T9S5 1454 aa19.77■□□□□ 0.76
LTBP3-204ENST00000525443 CDK13Q14004 1512 aaKnown RBP19.77■□□□□ 0.76
LTBP3-204ENST00000525443 CCDC184Q52MB2 194 aa19.77■□□□□ 0.75
LTBP3-204ENST00000525443 NAP1L5Q96NT1 182 aaPredicted RBP19.76■□□□□ 0.75
LTBP3-204ENST00000525443 AAMPQ13685 434 aa19.76■□□□□ 0.75
LTBP3-204ENST00000525443 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.75■□□□□ 0.75
LTBP3-204ENST00000525443 RRP9O43818 475 aaKnown RBP19.75■□□□□ 0.75
LTBP3-204ENST00000525443 FAM9BQ8IZU0 186 aa19.75■□□□□ 0.75
LTBP3-204ENST00000525443 DISP1Q96F81 1524 aa19.74■□□□□ 0.75
LTBP3-204ENST00000525443 LRRIQ1Q96JM4 1722 aa19.74■□□□□ 0.75
LTBP3-204ENST00000525443 RRP7BPQ9NSQ0 103 aa19.73■□□□□ 0.75
LTBP3-204ENST00000525443 EHBP1L1Q8N3D4 1523 aa19.73■□□□□ 0.75
LTBP3-204ENST00000525443 HECW1Q76N89 1606 aa19.73■□□□□ 0.75
LTBP3-204ENST00000525443 FGD1P98174 961 aa19.73■□□□□ 0.75
LTBP3-204ENST00000525443 MAGI3Q5TCQ9 1506 aa19.73■□□□□ 0.75
LTBP3-204ENST00000525443 HSP90AA1P07900 732 aaKnown RBP19.73■□□□□ 0.75
LTBP3-204ENST00000525443 PDE4AP27815 886 aa19.7■□□□□ 0.74
LTBP3-204ENST00000525443 PTPRKQ15262 1439 aa19.7■□□□□ 0.74
LTBP3-204ENST00000525443 AKNAQ7Z591 1439 aa19.7■□□□□ 0.74
LTBP3-204ENST00000525443 SUPT6HQ7KZ85 1726 aaKnown RBP19.7■□□□□ 0.74
LTBP3-204ENST00000525443 SLC4A3P48751 1232 aa19.7■□□□□ 0.74
LTBP3-204ENST00000525443 PDE4CQ08493 712 aa19.69■□□□□ 0.74
LTBP3-204ENST00000525443 KIAA0556O60303 1618 aa19.68■□□□□ 0.74
LTBP3-204ENST00000525443 CARMIL2Q6F5E8 1435 aa19.68■□□□□ 0.74
LTBP3-204ENST00000525443 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
LTBP3-204ENST00000525443 ZBED9Q6R2W3 1325 aa19.65■□□□□ 0.74
LTBP3-204ENST00000525443 PLB1Q6P1J6 1458 aa19.64■□□□□ 0.73
LTBP3-204ENST00000525443 NUP153P49790 1475 aaKnown RBP19.63■□□□□ 0.73
LTBP3-204ENST00000525443 BACH2Q9BYV9 841 aa19.63■□□□□ 0.73
LTBP3-204ENST00000525443 ZNF777Q9ULD5 760 aaPredicted RBP19.62■□□□□ 0.73
LTBP3-204ENST00000525443 NUP160Q12769 1436 aa19.62■□□□□ 0.73
LTBP3-204ENST00000525443 FRAT2O75474 233 aaPredicted RBP19.62■□□□□ 0.73
LTBP3-204ENST00000525443 ZNF644Q9H582 1327 aaPredicted RBP19.61■□□□□ 0.73
LTBP3-204ENST00000525443 HFM1A2PYH4 1435 aa19.6■□□□□ 0.73
LTBP3-204ENST00000525443 PTPN23Q9H3S7 1636 aa19.6■□□□□ 0.73
LTBP3-204ENST00000525443 PNNQ9H307 717 aaKnown RBP19.59■□□□□ 0.73
LTBP3-204ENST00000525443 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
LTBP3-204ENST00000525443 NAIPQ13075 1403 aa19.58■□□□□ 0.73
LTBP3-204ENST00000525443 TCERG1O14776 1098 aaKnown RBP19.58■□□□□ 0.73
LTBP3-204ENST00000525443 CFDP1Q9UEE9 299 aaPredicted RBP19.58■□□□□ 0.72
LTBP3-204ENST00000525443 ARHGEF11O15085 1522 aa19.57■□□□□ 0.72
LTBP3-204ENST00000525443 PLEKHD1A6NEE1 506 aa19.57■□□□□ 0.72
LTBP3-204ENST00000525443 ARID4BQ4LE39 1312 aaPredicted RBP19.57■□□□□ 0.72
LTBP3-204ENST00000525443 RAPGEF6Q8TEU7 1601 aa19.56■□□□□ 0.72
LTBP3-204ENST00000525443 DDRGK1Q96HY6 314 aa19.56■□□□□ 0.72
LTBP3-204ENST00000525443 MRS2Q9HD23 443 aa19.56■□□□□ 0.72
LTBP3-204ENST00000525443 MIA2Q96PC5 1412 aa19.55■□□□□ 0.72
LTBP3-204ENST00000525443 SENP3-EIF4A1A0A087X0R7 540 aa19.54■□□□□ 0.72
LTBP3-204ENST00000525443 BCL11BQ9C0K0 894 aaPredicted RBP19.53■□□□□ 0.72
LTBP3-204ENST00000525443 RGS3P49796 1198 aa19.52■□□□□ 0.72
LTBP3-204ENST00000525443 UACAQ9BZF9 1416 aa19.52■□□□□ 0.71
LTBP3-204ENST00000525443 TROQ12816 1431 aaPredicted RBP19.5■□□□□ 0.71
LTBP3-204ENST00000525443 TONSLQ96HA7 1378 aa19.5■□□□□ 0.71
LTBP3-204ENST00000525443 PTPRGP23470 1445 aa19.5■□□□□ 0.71
LTBP3-204ENST00000525443 TCOF1Q13428 1488 aaKnown RBP19.49■□□□□ 0.71
LTBP3-204ENST00000525443 PRDM4Q9UKN5 801 aa19.49■□□□□ 0.71
LTBP3-204ENST00000525443 RNF123Q5XPI4 1314 aa19.49■□□□□ 0.71
LTBP3-204ENST00000525443 ARXQ96QS3 562 aa19.48■□□□□ 0.71
LTBP3-204ENST00000525443 NUDCQ9Y266 331 aa19.47■□□□□ 0.71
LTBP3-204ENST00000525443 POGKQ9P215 609 aa19.47■□□□□ 0.71
LTBP3-204ENST00000525443 SMG6Q86US8 1419 aaKnown RBP19.47■□□□□ 0.71
LTBP3-204ENST00000525443 SKAP1Q86WV1 359 aa19.46■□□□□ 0.71
LTBP3-204ENST00000525443 PDIA4P13667 645 aaKnown RBP19.45■□□□□ 0.7
LTBP3-204ENST00000525443 FOXD1Q16676 465 aa19.45■□□□□ 0.7
LTBP3-204ENST00000525443 MPHOSPH9Q99550 1183 aa19.43■□□□□ 0.7
LTBP3-204ENST00000525443 MS4A1P11836 297 aa19.43■□□□□ 0.7
LTBP3-204ENST00000525443 CLCN1P35523 988 aa19.43■□□□□ 0.7
LTBP3-204ENST00000525443 DAPK1P53355 1430 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms