RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PHF8Q9UPP1 1060 aa10.63□□□□□ -0.71
USP47-206ENST00000525367 FBXO22Q8NEZ5 403 aa10.61□□□□□ -0.71
USP47-206ENST00000525367 TPRNQ4KMQ1 711 aa10.6□□□□□ -0.71
USP47-206ENST00000525367 SNPHO15079 494 aa10.59□□□□□ -0.71
USP47-206ENST00000525367 NBR1Q14596 966 aa10.57□□□□□ -0.72
USP47-206ENST00000525367 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.56□□□□□ -0.72
USP47-206ENST00000525367 MARVELD3Q96A59 401 aa10.55□□□□□ -0.72
USP47-206ENST00000525367 MS4A4AQ96JQ5 239 aa10.55□□□□□ -0.72
USP47-206ENST00000525367 NLRP6P59044 892 aa10.54□□□□□ -0.72
USP47-206ENST00000525367 SOX12O15370 315 aa10.53□□□□□ -0.72
USP47-206ENST00000525367 PDCD7Q8N8D1 485 aaKnown RBP10.49□□□□□ -0.73
USP47-206ENST00000525367 KCNV2Q8TDN2 545 aa10.49□□□□□ -0.73
USP47-206ENST00000525367 GOLGA2Q08379 1002 aa10.46□□□□□ -0.73
USP47-206ENST00000525367 KRTAP3-3Q9BYR6 98 aa10.45□□□□□ -0.74
USP47-206ENST00000525367 KRTAP3-2Q9BYR7 98 aa10.45□□□□□ -0.74
USP47-206ENST00000525367 WDR70Q9NW82 654 aa10.45□□□□□ -0.74
USP47-206ENST00000525367 POTEB3A0JP26 581 aa10.44□□□□□ -0.74
USP47-206ENST00000525367 POTEBQ6S5H4 581 aa10.44□□□□□ -0.74
USP47-206ENST00000525367 NCKAP5LQ9HCH0 1330 aa10.43□□□□□ -0.74
USP47-206ENST00000525367 EMP3P54852 163 aa10.43□□□□□ -0.74
USP47-206ENST00000525367 MKRN3Q13064 507 aaKnown RBP10.42□□□□□ -0.74
USP47-206ENST00000525367 C3orf67Q6ZVT6 689 aa10.42□□□□□ -0.74
USP47-206ENST00000525367 P3H3Q8IVL6 736 aa10.41□□□□□ -0.74
USP47-206ENST00000525367 L3MBTL3Q96JM7 780 aaPredicted RBP10.41□□□□□ -0.74
USP47-206ENST00000525367 HS3ST6Q96QI5 342 aa10.4□□□□□ -0.74
USP47-206ENST00000525367 DPY19L2Q6NUT2 758 aa10.37□□□□□ -0.75
USP47-206ENST00000525367 ILDR1Q86SU0 546 aaPredicted RBP10.37□□□□□ -0.75
USP47-206ENST00000525367 LARP6Q9BRS8 491 aaKnown RBP10.36□□□□□ -0.75
USP47-206ENST00000525367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.36□□□□□ -0.756e-7■■■□□ 15.1
USP47-206ENST00000525367 FAM205CA6NFA0 338 aa10.35□□□□□ -0.75
USP47-206ENST00000525367 CRISPLD2Q9H0B8 497 aa10.34□□□□□ -0.75
USP47-206ENST00000525367 E2F4Q16254 413 aa10.33□□□□□ -0.76
USP47-206ENST00000525367 MFSD10Q14728 455 aa10.31□□□□□ -0.76
USP47-206ENST00000525367 PDE4AP27815 886 aa10.29□□□□□ -0.76
USP47-206ENST00000525367 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
USP47-206ENST00000525367 ARHGEF1Q92888 912 aaKnown RBP10.28□□□□□ -0.76
USP47-206ENST00000525367 DDX27Q96GQ7 796 aaKnown RBP10.28□□□□□ -0.76
USP47-206ENST00000525367 SEMA3EO15041 775 aa10.26□□□□□ -0.77
USP47-206ENST00000525367 LMOD2Q6P5Q4 547 aa10.25□□□□□ -0.77
USP47-206ENST00000525367 MICALL2Q8IY33 904 aa10.25□□□□□ -0.77
USP47-206ENST00000525367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.24□□□□□ -0.77
USP47-206ENST00000525367 HOXB1P14653 301 aaPredicted RBP10.23□□□□□ -0.77
USP47-206ENST00000525367 CAMK2BQ13554 666 aa10.21□□□□□ -0.77
USP47-206ENST00000525367 PPP1R15BQ5SWA1 713 aa10.21□□□□□ -0.77
USP47-206ENST00000525367 BOLA1Q9Y3E2 137 aa10.21□□□□□ -0.77
USP47-206ENST00000525367 GPHNQ9NQX3 736 aaPredicted RBP10.2□□□□□ -0.78
USP47-206ENST00000525367 TESPA1A2RU30 521 aaPredicted RBP10.19□□□□□ -0.78
USP47-206ENST00000525367 DSG2Q14126 1118 aa10.19□□□□□ -0.78
USP47-206ENST00000525367 EMILIN3Q9NT22 766 aa10.16□□□□□ -0.78
USP47-206ENST00000525367 DOK7Q18PE1 504 aa10.15□□□□□ -0.78
USP47-206ENST00000525367 ZNF710Q8N1W2 664 aa10.14□□□□□ -0.79
USP47-206ENST00000525367 RNF166Q96A37 237 aaPredicted RBP10.14□□□□□ -0.79
USP47-206ENST00000525367 ARIH1Q9Y4X5 557 aaPredicted RBP10.14□□□□□ -0.79
USP47-206ENST00000525367 ERBB3P21860 1342 aa10.13□□□□□ -0.79
USP47-206ENST00000525367 C2orf72A6NCS6 295 aa10.13□□□□□ -0.79
USP47-206ENST00000525367 G3V3G9 751 aa10.12□□□□□ -0.79
USP47-206ENST00000525367 DPYSL4O14531 572 aa10.12□□□□□ -0.79
USP47-206ENST00000525367 MLLT3P42568 568 aaPredicted RBP10.12□□□□□ -0.79
USP47-206ENST00000525367 TMEM92Q6UXU6 159 aa10.12□□□□□ -0.79
USP47-206ENST00000525367 TMC2Q8TDI7 906 aa10.12□□□□□ -0.79
USP47-206ENST00000525367 KIF3CO14782 793 aa10.11□□□□□ -0.79
USP47-206ENST00000525367 FOXK1P85037 733 aa10.1□□□□□ -0.79
USP47-206ENST00000525367 ZC3H15Q8WU90 426 aaKnown RBP10.1□□□□□ -0.79
USP47-206ENST00000525367 PLPP6Q8IY26 295 aa10.09□□□□□ -0.79
USP47-206ENST00000525367 TULP1O00294 542 aaPredicted RBP10.08□□□□□ -0.8
USP47-206ENST00000525367 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
USP47-206ENST00000525367 MYT1LQ9UL68 1186 aa10.07□□□□□ -0.8
USP47-206ENST00000525367 RIMBP2O15034 1052 aa10.06□□□□□ -0.8
USP47-206ENST00000525367 RBM26Q5T8P6 1007 aaKnown RBP10.06□□□□□ -0.8
USP47-206ENST00000525367 ZNF687Q8N1G0 1237 aa10.05□□□□□ -0.8
USP47-206ENST00000525367 ZSWIM6Q9HCJ5 1215 aa10.05□□□□□ -0.8
USP47-206ENST00000525367 PDIA6Q15084 440 aa10.03□□□□□ -0.8
USP47-206ENST00000525367 UPF1Q92900 1129 aaKnown RBP eCLIP10.03□□□□□ -0.8
USP47-206ENST00000525367 GPR153Q6NV75 609 aa10.01□□□□□ -0.81
USP47-206ENST00000525367 SLC24A3Q9HC58 644 aa10.01□□□□□ -0.81
USP47-206ENST00000525367 PTGER2P43116 358 aa10□□□□□ -0.81
USP47-206ENST00000525367 SMYD5Q6GMV2 418 aa10□□□□□ -0.81
USP47-206ENST00000525367 ZMYND10O75800 440 aa9.97□□□□□ -0.81
USP47-206ENST00000525367 SPDYE16A6NNV3 312 aaPredicted RBP9.96□□□□□ -0.82
USP47-206ENST00000525367 GPIHBP1Q8IV16 184 aa9.96□□□□□ -0.82
USP47-206ENST00000525367 BRPF1P55201 1214 aaPredicted RBP9.95□□□□□ -0.82
USP47-206ENST00000525367 MAP3K9P80192 1104 aa9.95□□□□□ -0.82
USP47-206ENST00000525367 OXER1Q8TDS5 423 aa9.94□□□□□ -0.82
USP47-206ENST00000525367 GRXCR2A6NFK2 248 aa9.93□□□□□ -0.82
USP47-206ENST00000525367 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
USP47-206ENST00000525367 GPR37O15354 613 aa9.9□□□□□ -0.82
USP47-206ENST00000525367 PRIM1P49642 420 aaKnown RBP9.9□□□□□ -0.82
USP47-206ENST00000525367 DDX12PQ92771 950 aa9.9□□□□□ -0.82
USP47-206ENST00000525367 NEUROD2Q15784 382 aa9.88□□□□□ -0.83
USP47-206ENST00000525367 EVI5O60447 810 aa9.87□□□□□ -0.83
USP47-206ENST00000525367 OSBPP22059 807 aa9.87□□□□□ -0.83
USP47-206ENST00000525367 ARSIQ5FYB1 569 aa9.87□□□□□ -0.83
USP47-206ENST00000525367 ZNF316A6NFI3 1004 aaPredicted RBP9.86□□□□□ -0.83
USP47-206ENST00000525367 LSM11P83369 360 aaKnown RBP eCLIP9.86□□□□□ -0.83
USP47-206ENST00000525367 ANKRD13DQ6ZTN6 518 aa9.86□□□□□ -0.83
USP47-206ENST00000525367 PTCD2Q8WV60 388 aaKnown RBP9.84□□□□□ -0.83
USP47-206ENST00000525367 NUTM2FA1L443 756 aa9.83□□□□□ -0.84
USP47-206ENST00000525367 KRI1Q8N9T8 703 aaKnown RBP9.83□□□□□ -0.84
USP47-206ENST00000525367 TMEM132AQ24JP5 1023 aa9.82□□□□□ -0.84
USP47-206ENST00000525367 TBC1D12O60347 775 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms