RNA–Protein interactions for RNA: ENST00000524798.1

LTBP3-203, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-203ENST00000524798 MYO5CQ9NQX4 1742 aa31.89■■■□□ 2.7
LTBP3-203ENST00000524798 POGZQ7Z3K3 1410 aa31.88■■■□□ 2.69
LTBP3-203ENST00000524798 PTPRMP28827 1452 aa31.88■■■□□ 2.69
LTBP3-203ENST00000524798 CCDC18Q5T9S5 1454 aa31.86■■■□□ 2.69
LTBP3-203ENST00000524798 PCF11O94913 1555 aaKnown RBP31.85■■■□□ 2.69
LTBP3-203ENST00000524798 ZFYVE16Q7Z3T8 1539 aa31.85■■■□□ 2.69
LTBP3-203ENST00000524798 YEATS2Q9ULM3 1422 aa31.84■■■□□ 2.69
LTBP3-203ENST00000524798 FYCO1Q9BQS8 1478 aa31.79■■■□□ 2.68
LTBP3-203ENST00000524798 MADDQ8WXG6 1647 aa31.78■■■□□ 2.68
LTBP3-203ENST00000524798 ARHGAP5Q13017 1502 aa31.77■■■□□ 2.68
LTBP3-203ENST00000524798 ZNF518AQ6AHZ1 1483 aa31.72■■■□□ 2.67
LTBP3-203ENST00000524798 SIGLEC1Q9BZZ2 1709 aa31.72■■■□□ 2.67
LTBP3-203ENST00000524798 ATP10AO60312 1499 aa31.72■■■□□ 2.67
LTBP3-203ENST00000524798 CDC42BPBQ9Y5S2 1711 aa31.7■■■□□ 2.67
LTBP3-203ENST00000524798 AFAP1Q8N556 730 aa31.69■■■□□ 2.66
LTBP3-203ENST00000524798 KDM5CP41229 1560 aa31.68■■■□□ 2.66
LTBP3-203ENST00000524798 PREX2Q70Z35 1606 aa31.67■■■□□ 2.66
LTBP3-203ENST00000524798 C9orf84Q5VXU9 1444 aa31.66■■■□□ 2.66
LTBP3-203ENST00000524798 RIMS1Q86UR5 1692 aaKnown RBP31.65■■■□□ 2.66
LTBP3-203ENST00000524798 ABCC1P33527 1531 aa31.59■■■□□ 2.65
LTBP3-203ENST00000524798 ARHGEF12Q9NZN5 1544 aa31.59■■■□□ 2.65
LTBP3-203ENST00000524798 MLH3Q9UHC1 1453 aa31.59■■■□□ 2.65
LTBP3-203ENST00000524798 MLECQ14165 292 aa31.59■■■□□ 2.65
LTBP3-203ENST00000524798 CDC42BPAQ5VT25 1732 aa31.58■■■□□ 2.65
LTBP3-203ENST00000524798 TRAPPC8Q9Y2L5 1435 aa31.58■■■□□ 2.65
LTBP3-203ENST00000524798 LMTK3Q96Q04 1460 aa31.55■■■□□ 2.64
LTBP3-203ENST00000524798 GPATCH8Q9UKJ3 1502 aaKnown RBP31.54■■■□□ 2.64
LTBP3-203ENST00000524798 REREQ9P2R6 1566 aa31.52■■■□□ 2.64
LTBP3-203ENST00000524798 DIP2CQ9Y2E4 1556 aa31.52■■■□□ 2.64
LTBP3-203ENST00000524798 ITSN2Q9NZM3 1697 aa31.52■■■□□ 2.64
LTBP3-203ENST00000524798 MYT1LQ9UL68 1186 aa31.52■■■□□ 2.64
LTBP3-203ENST00000524798 FER1L4A9Z1Z3 1794 aa31.51■■■□□ 2.64
LTBP3-203ENST00000524798 CEP162Q5TB80 1403 aa31.5■■■□□ 2.63
LTBP3-203ENST00000524798 ILDR1Q86SU0 546 aaPredicted RBP31.5■■■□□ 2.63
LTBP3-203ENST00000524798 MTUS2Q5JR59 1369 aa31.47■■■□□ 2.63
LTBP3-203ENST00000524798 ABCA6Q8N139 1617 aa31.46■■■□□ 2.63
LTBP3-203ENST00000524798 SAMD9LQ8IVG5 1584 aa31.45■■■□□ 2.63
LTBP3-203ENST00000524798 ZNF777Q9ULD5 760 aaPredicted RBP31.45■■■□□ 2.63
LTBP3-203ENST00000524798 PLPPR3Q6T4P5 718 aa31.44■■■□□ 2.62
LTBP3-203ENST00000524798 AGLP35573 1532 aa31.44■■■□□ 2.62
LTBP3-203ENST00000524798 CCNB3Q8WWL7 1395 aa31.43■■■□□ 2.62
LTBP3-203ENST00000524798 KIAA1107Q9UPP5 1409 aa31.42■■■□□ 2.62
LTBP3-203ENST00000524798 CFDP1Q9UEE9 299 aaPredicted RBP31.42■■■□□ 2.62
LTBP3-203ENST00000524798 KIDINS220Q9ULH0 1771 aa31.42■■■□□ 2.62
LTBP3-203ENST00000524798 PLEKHH2Q8IVE3 1493 aa31.39■■■□□ 2.62
LTBP3-203ENST00000524798 SYCP2Q9BX26 1530 aa31.39■■■□□ 2.61
LTBP3-203ENST00000524798 HNRNPMP52272 730 aaKnown RBP eCLIP31.38■■■□□ 2.61
LTBP3-203ENST00000524798 EHBP1L1Q8N3D4 1523 aa31.35■■■□□ 2.61
LTBP3-203ENST00000524798 CEBPAP49715 358 aaPredicted RBP31.35■■■□□ 2.61
LTBP3-203ENST00000524798 HSPA2P54652 639 aa31.35■■■□□ 2.61
LTBP3-203ENST00000524798 SPAG9O60271 1321 aaKnown RBP31.34■■■□□ 2.61
LTBP3-203ENST00000524798 TIAM1Q13009 1591 aa31.3■■■□□ 2.6
LTBP3-203ENST00000524798 LOC105371045A0A1W2PR82 267 aa31.28■■■□□ 2.6
LTBP3-203ENST00000524798 ATP7AQ04656 1500 aa31.25■■■□□ 2.59
LTBP3-203ENST00000524798 PREX1Q8TCU6 1659 aa31.25■■■□□ 2.59
LTBP3-203ENST00000524798 SETD1BQ9UPS6 1966 aaKnown RBP31.25■■■□□ 2.59
LTBP3-203ENST00000524798 ZNF644Q9H582 1327 aaPredicted RBP31.24■■■□□ 2.59
LTBP3-203ENST00000524798 ESF1Q9H501 851 aaKnown RBP31.24■■■□□ 2.59
LTBP3-203ENST00000524798 INO80Q9ULG1 1556 aaPredicted RBP31.23■■■□□ 2.59
LTBP3-203ENST00000524798 CNTLNQ9NXG0 1405 aa31.23■■■□□ 2.59
LTBP3-203ENST00000524798 MBD5Q9P267 1494 aa31.22■■■□□ 2.59
LTBP3-203ENST00000524798 VPS8Q8N3P4 1428 aa31.19■■■□□ 2.58
LTBP3-203ENST00000524798 C3P01024 1663 aa31.19■■■□□ 2.58
LTBP3-203ENST00000524798 A2MP01023 1474 aa31.18■■■□□ 2.58
LTBP3-203ENST00000524798 NCOA2Q15596 1464 aa31.18■■■□□ 2.58
LTBP3-203ENST00000524798 UHRF1BP1Q6BDS2 1440 aa31.17■■■□□ 2.58
LTBP3-203ENST00000524798 PLXNC1O60486 1568 aa31.17■■■□□ 2.58
LTBP3-203ENST00000524798 FBXO41Q8TF61 875 aa31.16■■■□□ 2.58
LTBP3-203ENST00000524798 SUPT6HQ7KZ85 1726 aaKnown RBP31.15■■■□□ 2.58
LTBP3-203ENST00000524798 RTEL1-TNFRSF6BF6WH68 1400 aa31.14■■■□□ 2.58
LTBP3-203ENST00000524798 RSPH4AQ5TD94 716 aa31.1■■■□□ 2.57
LTBP3-203ENST00000524798 MROH2AA6NES4 1674 aa31.09■■■□□ 2.57
LTBP3-203ENST00000524798 LRRC9Q6ZRR7 1453 aa31.08■■■□□ 2.57
LTBP3-203ENST00000524798 ZMYM3Q14202 1370 aa31.08■■■□□ 2.57
LTBP3-203ENST00000524798 ADGBQ8N7X0 1667 aa31.08■■■□□ 2.57
LTBP3-203ENST00000524798 PPP6R1Q9UPN7 881 aa31.07■■■□□ 2.56
LTBP3-203ENST00000524798 NPATQ14207 1427 aa31.07■■■□□ 2.56
LTBP3-203ENST00000524798 MAP3K1Q13233 1512 aa31.06■■■□□ 2.56
LTBP3-203ENST00000524798 CAMSAP2Q08AD1 1489 aa31.06■■■□□ 2.56
LTBP3-203ENST00000524798 CCDC141Q6ZP82 1450 aa31.04■■■□□ 2.56
LTBP3-203ENST00000524798 DMRT2Q9Y5R5 561 aa31.04■■■□□ 2.56
LTBP3-203ENST00000524798 GGT6Q6P531 493 aa31.03■■■□□ 2.56
LTBP3-203ENST00000524798 DHX29Q7Z478 1369 aaKnown RBP31.03■■■□□ 2.56
LTBP3-203ENST00000524798 STRCQ7RTU9 1775 aa31.02■■■□□ 2.56
LTBP3-203ENST00000524798 KANK4Q5T7N3 995 aaPredicted RBP30.98■■■□□ 2.55
LTBP3-203ENST00000524798 CLTCQ00610 1675 aaKnown RBP30.97■■■□□ 2.55
LTBP3-203ENST00000524798 ARHGEF5Q12774 1597 aa30.96■■■□□ 2.55
LTBP3-203ENST00000524798 CERKQ8TCT0 537 aa30.94■■■□□ 2.54
LTBP3-203ENST00000524798 PTPRKQ15262 1439 aa30.93■■■□□ 2.54
LTBP3-203ENST00000524798 PTPRTO14522 1441 aa30.92■■■□□ 2.54
LTBP3-203ENST00000524798 TSPY4P0CV99 314 aa30.92■■■□□ 2.54
LTBP3-203ENST00000524798 TSPY10P0CW01 314 aa30.92■■■□□ 2.54
LTBP3-203ENST00000524798 KIF3BO15066 747 aa30.89■■■□□ 2.54
LTBP3-203ENST00000524798 NCOA1Q15788 1441 aa30.89■■■□□ 2.53
LTBP3-203ENST00000524798 MIA2Q96PC5 1412 aa30.89■■■□□ 2.53
LTBP3-203ENST00000524798 MYOM3Q5VTT5 1437 aa30.87■■■□□ 2.53
LTBP3-203ENST00000524798 FAM135AQ9P2D6 1515 aa30.83■■■□□ 2.53
LTBP3-203ENST00000524798 MAST1Q9Y2H9 1570 aa30.82■■■□□ 2.52
LTBP3-203ENST00000524798 CAMSAP1Q5T5Y3 1602 aa30.81■■■□□ 2.52
LTBP3-203ENST00000524798 MYO3AQ8NEV4 1616 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms