RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 CDC42BPAQ5VT25 1732 aa15.91■□□□□ 0.14
PACS1-202ENST00000524784 ARHGAP5Q13017 1502 aa15.91■□□□□ 0.14
PACS1-202ENST00000524784 ABCA9Q8IUA7 1624 aa15.9■□□□□ 0.14
PACS1-202ENST00000524784 MYO5CQ9NQX4 1742 aa15.89■□□□□ 0.13
PACS1-202ENST00000524784 FAM69CQ0P6D2 419 aa15.89■□□□□ 0.13
PACS1-202ENST00000524784 PREX2Q70Z35 1606 aa15.89■□□□□ 0.13
PACS1-202ENST00000524784 CAMSAP2Q08AD1 1489 aa15.89■□□□□ 0.13
PACS1-202ENST00000524784 CD109Q6YHK3 1445 aa15.88■□□□□ 0.13
PACS1-202ENST00000524784 RSPH4AQ5TD94 716 aa15.88■□□□□ 0.13
PACS1-202ENST00000524784 ARAP3Q8WWN8 1544 aa15.87■□□□□ 0.13
PACS1-202ENST00000524784 PLEKHH2Q8IVE3 1493 aa15.86■□□□□ 0.13
PACS1-202ENST00000524784 CDC42BPBQ9Y5S2 1711 aa15.85■□□□□ 0.13
PACS1-202ENST00000524784 HNRNPMP52272 730 aaKnown RBP eCLIP15.85■□□□□ 0.13
PACS1-202ENST00000524784 GLI2P10070 1586 aa15.84■□□□□ 0.13
PACS1-202ENST00000524784 TSPY4P0CV99 314 aa15.84■□□□□ 0.13
PACS1-202ENST00000524784 TSPY10P0CW01 314 aa15.84■□□□□ 0.13
PACS1-202ENST00000524784 ABCC5O15440 1437 aa15.83■□□□□ 0.12
PACS1-202ENST00000524784 DAPK1P53355 1430 aa15.83■□□□□ 0.12
PACS1-202ENST00000524784 KIAA1107Q9UPP5 1409 aa15.83■□□□□ 0.12
PACS1-202ENST00000524784 FANCAO15360 1455 aa15.83■□□□□ 0.12
PACS1-202ENST00000524784 CHIC2Q9UKJ5 165 aa15.82■□□□□ 0.12
PACS1-202ENST00000524784 SAMD9LQ8IVG5 1584 aa15.82■□□□□ 0.12
PACS1-202ENST00000524784 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
PACS1-202ENST00000524784 DNMT1P26358 1616 aaKnown RBP15.79■□□□□ 0.12
PACS1-202ENST00000524784 DIP2BQ9P265 1576 aa15.79■□□□□ 0.12
PACS1-202ENST00000524784 MBD5Q9P267 1494 aa15.78■□□□□ 0.12
PACS1-202ENST00000524784 AKNAQ7Z591 1439 aa15.78■□□□□ 0.12
PACS1-202ENST00000524784 CCDC141Q6ZP82 1450 aa15.78■□□□□ 0.12
PACS1-202ENST00000524784 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.12
PACS1-202ENST00000524784 RRP7BPQ9NSQ0 103 aa15.77■□□□□ 0.12
PACS1-202ENST00000524784 ARHGEF5Q12774 1597 aa15.77■□□□□ 0.11
PACS1-202ENST00000524784 SYCP2Q9BX26 1530 aa15.77■□□□□ 0.11
PACS1-202ENST00000524784 ROCK1Q13464 1354 aa15.76■□□□□ 0.11
PACS1-202ENST00000524784 MAP3K4Q9Y6R4 1608 aa15.76■□□□□ 0.11
PACS1-202ENST00000524784 ADGRL1O94910 1474 aa15.76■□□□□ 0.11
PACS1-202ENST00000524784 SCAPERQ9BY12 1400 aa15.76■□□□□ 0.11
PACS1-202ENST00000524784 ANKRD30AQ9BXX3 1397 aa15.75■□□□□ 0.11
PACS1-202ENST00000524784 CFAP74Q9C0B2 1584 aa15.75■□□□□ 0.11
PACS1-202ENST00000524784 ABCC1P33527 1531 aa15.75■□□□□ 0.11
PACS1-202ENST00000524784 NEO1Q92859 1461 aa15.75■□□□□ 0.11
PACS1-202ENST00000524784 SHANK2Q9UPX8 1470 aa15.74■□□□□ 0.11
PACS1-202ENST00000524784 HRCP23327 699 aa15.74■□□□□ 0.11
PACS1-202ENST00000524784 HFM1A2PYH4 1435 aa15.74■□□□□ 0.11
PACS1-202ENST00000524784 C9orf84Q5VXU9 1444 aa15.74■□□□□ 0.11
PACS1-202ENST00000524784 ARHGEF12Q9NZN5 1544 aa15.73■□□□□ 0.11
PACS1-202ENST00000524784 TEX14Q8IWB6 1497 aa15.73■□□□□ 0.11
PACS1-202ENST00000524784 TRHP20396 242 aaPredicted RBP15.73■□□□□ 0.11
PACS1-202ENST00000524784 TRAPPC8Q9Y2L5 1435 aa15.72■□□□□ 0.11
PACS1-202ENST00000524784 AFAP1Q8N556 730 aa15.72■□□□□ 0.11
PACS1-202ENST00000524784 MYT1LQ9UL68 1186 aa15.72■□□□□ 0.11
PACS1-202ENST00000524784 RAB3GAP2Q9H2M9 1393 aa15.72■□□□□ 0.11
PACS1-202ENST00000524784 SPAG9O60271 1321 aaKnown RBP15.71■□□□□ 0.11
PACS1-202ENST00000524784 ACIN1Q9UKV3 1341 aaKnown RBP15.7■□□□□ 0.1
PACS1-202ENST00000524784 NAIPQ13075 1403 aa15.7■□□□□ 0.1
PACS1-202ENST00000524784 NCOA1Q15788 1441 aa15.7■□□□□ 0.1
PACS1-202ENST00000524784 ADGRL2O95490 1459 aa15.7■□□□□ 0.1
PACS1-202ENST00000524784 CCER1Q8TC90 406 aaPredicted RBP15.69■□□□□ 0.1
PACS1-202ENST00000524784 CROCC2H7BZ55 1655 aa15.69■□□□□ 0.1
PACS1-202ENST00000524784 DENND4BO75064 1496 aaPredicted RBP15.68■□□□□ 0.1
PACS1-202ENST00000524784 KIF13AQ9H1H9 1805 aa15.67■□□□□ 0.1
PACS1-202ENST00000524784 RTEL1-TNFRSF6BF6WH68 1400 aa15.67■□□□□ 0.1
PACS1-202ENST00000524784 MAST1Q9Y2H9 1570 aa15.66■□□□□ 0.1
PACS1-202ENST00000524784 ZNF518AQ6AHZ1 1483 aa15.66■□□□□ 0.1
PACS1-202ENST00000524784 TSPOAP1O95153 1857 aa15.66■□□□□ 0.1
PACS1-202ENST00000524784 ADGBQ8N7X0 1667 aa15.66■□□□□ 0.1
PACS1-202ENST00000524784 KIF15Q9NS87 1388 aa15.65■□□□□ 0.1
PACS1-202ENST00000524784 POGZQ7Z3K3 1410 aa15.65■□□□□ 0.1
PACS1-202ENST00000524784 RAPGEF3O95398 923 aa15.64■□□□□ 0.09
PACS1-202ENST00000524784 TRIM52Q96A61 297 aa15.64■□□□□ 0.09
PACS1-202ENST00000524784 ANKRD50Q9ULJ7 1429 aa15.63■□□□□ 0.09
PACS1-202ENST00000524784 GCC2Q8IWJ2 1684 aa15.63■□□□□ 0.09
PACS1-202ENST00000524784 PPRC1Q5VV67 1664 aaKnown RBP15.61■□□□□ 0.09
PACS1-202ENST00000524784 MLH3Q9UHC1 1453 aa15.59■□□□□ 0.09
PACS1-202ENST00000524784 ATP7AQ04656 1500 aa15.59■□□□□ 0.09
PACS1-202ENST00000524784 PLXNC1O60486 1568 aa15.59■□□□□ 0.09
PACS1-202ENST00000524784 DUOX2Q9NRD8 1548 aa15.58■□□□□ 0.09
PACS1-202ENST00000524784 ZFYVE16Q7Z3T8 1539 aa15.58■□□□□ 0.08
PACS1-202ENST00000524784 KDM5CP41229 1560 aa15.58■□□□□ 0.08
PACS1-202ENST00000524784 DHX57Q6P158 1386 aaKnown RBP15.57■□□□□ 0.08
PACS1-202ENST00000524784 INO80Q9ULG1 1556 aaPredicted RBP15.56■□□□□ 0.08
PACS1-202ENST00000524784 ERBINQ96RT1 1412 aa15.55■□□□□ 0.08
PACS1-202ENST00000524784 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
PACS1-202ENST00000524784 KDM6BO15054 1643 aa15.54■□□□□ 0.08
PACS1-202ENST00000524784 HECW2Q9P2P5 1572 aa15.54■□□□□ 0.08
PACS1-202ENST00000524784 DHX29Q7Z478 1369 aaKnown RBP15.54■□□□□ 0.08
PACS1-202ENST00000524784 CLSPNQ9HAW4 1339 aa15.53■□□□□ 0.08
PACS1-202ENST00000524784 MPHOSPH9Q99550 1183 aa15.53■□□□□ 0.08
PACS1-202ENST00000524784 RICTORQ6R327 1708 aa15.53■□□□□ 0.08
PACS1-202ENST00000524784 MAGI2Q86UL8 1455 aa15.52■□□□□ 0.08
PACS1-202ENST00000524784 KIDINS220Q9ULH0 1771 aa15.52■□□□□ 0.08
PACS1-202ENST00000524784 A2MP01023 1474 aa15.52■□□□□ 0.07
PACS1-202ENST00000524784 NUP155O75694 1391 aa15.51■□□□□ 0.07
PACS1-202ENST00000524784 KIF3BO15066 747 aa15.51■□□□□ 0.07
PACS1-202ENST00000524784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.079e-8■□□□□ 10.2
PACS1-202ENST00000524784 SLC4A1APQ9BWU0 796 aaKnown RBP15.51■□□□□ 0.07
PACS1-202ENST00000524784 COL17A1Q9UMD9 1497 aaPredicted RBP15.51■□□□□ 0.07
PACS1-202ENST00000524784 ZMYM4Q5VZL5 1548 aa15.5■□□□□ 0.07
PACS1-202ENST00000524784 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
PACS1-202ENST00000524784 YEATS2Q9ULM3 1422 aa15.47■□□□□ 0.07
PACS1-202ENST00000524784 ATP10AO60312 1499 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 302.1 ms