RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 ZEB1P37275 1124 aaPredicted RBP17.62■□□□□ 0.41
CSTF3-205ENST00000524775 CCER1Q8TC90 406 aaPredicted RBP17.62■□□□□ 0.41
CSTF3-205ENST00000524775 RAB3GAP2Q9H2M9 1393 aa17.62■□□□□ 0.41
CSTF3-205ENST00000524775 GCC2Q8IWJ2 1684 aa17.61■□□□□ 0.41
CSTF3-205ENST00000524775 ABCC5O15440 1437 aa17.61■□□□□ 0.41
CSTF3-205ENST00000524775 CFDP1Q9UEE9 299 aaPredicted RBP17.6■□□□□ 0.41
CSTF3-205ENST00000524775 DAPK1P53355 1430 aa17.6■□□□□ 0.41
CSTF3-205ENST00000524775 SAMD9LQ8IVG5 1584 aa17.59■□□□□ 0.41
CSTF3-205ENST00000524775 HFM1A2PYH4 1435 aa17.59■□□□□ 0.41
CSTF3-205ENST00000524775 DHX57Q6P158 1386 aaKnown RBP17.59■□□□□ 0.41
CSTF3-205ENST00000524775 NAIPQ13075 1403 aa17.58■□□□□ 0.41
CSTF3-205ENST00000524775 AKNAQ7Z591 1439 aa17.58■□□□□ 0.41
CSTF3-205ENST00000524775 WDR7Q9Y4E6 1490 aa17.57■□□□□ 0.4
CSTF3-205ENST00000524775 ADGBQ8N7X0 1667 aa17.57■□□□□ 0.4
CSTF3-205ENST00000524775 ARHGEF5Q12774 1597 aa17.56■□□□□ 0.4
CSTF3-205ENST00000524775 ABCA9Q8IUA7 1624 aa17.55■□□□□ 0.4
CSTF3-205ENST00000524775 ASXL2Q76L83 1435 aa17.54■□□□□ 0.4
CSTF3-205ENST00000524775 KDM6BO15054 1643 aa17.54■□□□□ 0.4
CSTF3-205ENST00000524775 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
CSTF3-205ENST00000524775 MBD5Q9P267 1494 aa17.53■□□□□ 0.4
CSTF3-205ENST00000524775 PLCH2O75038 1416 aa17.53■□□□□ 0.4
CSTF3-205ENST00000524775 ARAP3Q8WWN8 1544 aa17.52■□□□□ 0.4
CSTF3-205ENST00000524775 KCNH8Q96L42 1107 aa17.52■□□□□ 0.4
CSTF3-205ENST00000524775 ADGRL2O95490 1459 aa17.51■□□□□ 0.39
CSTF3-205ENST00000524775 ARHGAP5Q13017 1502 aa17.49■□□□□ 0.39
CSTF3-205ENST00000524775 CHIC2Q9UKJ5 165 aa17.49■□□□□ 0.39
CSTF3-205ENST00000524775 ZNF777Q9ULD5 760 aaPredicted RBP17.49■□□□□ 0.39
CSTF3-205ENST00000524775 SHANK2Q9UPX8 1470 aa17.49■□□□□ 0.39
CSTF3-205ENST00000524775 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
CSTF3-205ENST00000524775 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
CSTF3-205ENST00000524775 ARHGEF12Q9NZN5 1544 aa17.47■□□□□ 0.39
CSTF3-205ENST00000524775 RRP7BPQ9NSQ0 103 aa17.46■□□□□ 0.39
CSTF3-205ENST00000524775 NCOA1Q15788 1441 aa17.46■□□□□ 0.39
CSTF3-205ENST00000524775 KIAA1107Q9UPP5 1409 aa17.46■□□□□ 0.39
CSTF3-205ENST00000524775 MAST1Q9Y2H9 1570 aa17.45■□□□□ 0.38
CSTF3-205ENST00000524775 SYCP2Q9BX26 1530 aa17.45■□□□□ 0.38
CSTF3-205ENST00000524775 ABCC1P33527 1531 aa17.44■□□□□ 0.38
CSTF3-205ENST00000524775 HNRNPMP52272 730 aaKnown RBP eCLIP17.44■□□□□ 0.38
CSTF3-205ENST00000524775 PLEKHH2Q8IVE3 1493 aa17.44■□□□□ 0.38
CSTF3-205ENST00000524775 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
CSTF3-205ENST00000524775 CCDC141Q6ZP82 1450 aa17.43■□□□□ 0.38
CSTF3-205ENST00000524775 CYB5RLQ6IPT4 315 aa17.42■□□□□ 0.38
CSTF3-205ENST00000524775 C9orf84Q5VXU9 1444 aa17.41■□□□□ 0.38
CSTF3-205ENST00000524775 RSPH4AQ5TD94 716 aa17.4■□□□□ 0.38
CSTF3-205ENST00000524775 EFCAB2Q5VUJ9 269 aa17.4■□□□□ 0.38
CSTF3-205ENST00000524775 DENND4BO75064 1496 aaPredicted RBP17.38■□□□□ 0.37
CSTF3-205ENST00000524775 ANKRD30AQ9BXX3 1397 aa17.37■□□□□ 0.37
CSTF3-205ENST00000524775 PLXNC1O60486 1568 aa17.36■□□□□ 0.37
CSTF3-205ENST00000524775 GLI2P10070 1586 aa17.36■□□□□ 0.37
CSTF3-205ENST00000524775 MAP3K4Q9Y6R4 1608 aa17.36■□□□□ 0.37
CSTF3-205ENST00000524775 TRAPPC8Q9Y2L5 1435 aa17.35■□□□□ 0.37
CSTF3-205ENST00000524775 FANCAO15360 1455 aa17.35■□□□□ 0.37
CSTF3-205ENST00000524775 TSPY4P0CV99 314 aa17.33■□□□□ 0.36
CSTF3-205ENST00000524775 TSPY10P0CW01 314 aa17.33■□□□□ 0.36
CSTF3-205ENST00000524775 CFAP74Q9C0B2 1584 aa17.32■□□□□ 0.36
CSTF3-205ENST00000524775 CD109Q6YHK3 1445 aa17.31■□□□□ 0.36
CSTF3-205ENST00000524775 ACIN1Q9UKV3 1341 aaKnown RBP17.31■□□□□ 0.36
CSTF3-205ENST00000524775 ANKRD50Q9ULJ7 1429 aa17.3■□□□□ 0.36
CSTF3-205ENST00000524775 DIP2BQ9P265 1576 aa17.29■□□□□ 0.36
CSTF3-205ENST00000524775 PZPP20742 1482 aa17.29■□□□□ 0.36
CSTF3-205ENST00000524775 KIF15Q9NS87 1388 aa17.28■□□□□ 0.36
CSTF3-205ENST00000524775 INO80Q9ULG1 1556 aaPredicted RBP17.28■□□□□ 0.36
CSTF3-205ENST00000524775 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.36
CSTF3-205ENST00000524775 KIF13AQ9H1H9 1805 aa17.27■□□□□ 0.36
CSTF3-205ENST00000524775 RTEL1-TNFRSF6BF6WH68 1400 aa17.27■□□□□ 0.35
CSTF3-205ENST00000524775 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
CSTF3-205ENST00000524775 PPRC1Q5VV67 1664 aaKnown RBP17.26■□□□□ 0.35
CSTF3-205ENST00000524775 ADGRL1O94910 1474 aa17.26■□□□□ 0.35
CSTF3-205ENST00000524775 SCAPERQ9BY12 1400 aa17.25■□□□□ 0.35
CSTF3-205ENST00000524775 MPHOSPH9Q99550 1183 aa17.25■□□□□ 0.35
CSTF3-205ENST00000524775 KIDINS220Q9ULH0 1771 aa17.25■□□□□ 0.35
CSTF3-205ENST00000524775 UNC13BO14795 1591 aa17.24■□□□□ 0.35
CSTF3-205ENST00000524775 SIN3AQ96ST3 1273 aa17.24■□□□□ 0.35
CSTF3-205ENST00000524775 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
CSTF3-205ENST00000524775 NEO1Q92859 1461 aa17.24■□□□□ 0.35
CSTF3-205ENST00000524775 AFAP1Q8N556 730 aa17.23■□□□□ 0.35
CSTF3-205ENST00000524775 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
CSTF3-205ENST00000524775 KDM5CP41229 1560 aa17.22■□□□□ 0.35
CSTF3-205ENST00000524775 ATP7AQ04656 1500 aa17.21■□□□□ 0.35
CSTF3-205ENST00000524775 RICTORQ6R327 1708 aa17.21■□□□□ 0.35
CSTF3-205ENST00000524775 TSPOAP1O95153 1857 aa17.2■□□□□ 0.34
CSTF3-205ENST00000524775 SPAG9O60271 1321 aaKnown RBP17.2■□□□□ 0.34
CSTF3-205ENST00000524775 MAGI2Q86UL8 1455 aa17.18■□□□□ 0.34
CSTF3-205ENST00000524775 ANKRD30BQ9BXX2 1392 aa17.18■□□□□ 0.34
CSTF3-205ENST00000524775 POGZQ7Z3K3 1410 aa17.18■□□□□ 0.34
CSTF3-205ENST00000524775 ERBINQ96RT1 1412 aa17.18■□□□□ 0.34
CSTF3-205ENST00000524775 IQGAP3Q86VI3 1631 aa17.17■□□□□ 0.34
CSTF3-205ENST00000524775 ZNF518AQ6AHZ1 1483 aa17.17■□□□□ 0.34
CSTF3-205ENST00000524775 DEPDC5O75140 1603 aa17.16■□□□□ 0.34
CSTF3-205ENST00000524775 TIMELESSQ9UNS1 1208 aa17.15■□□□□ 0.34
CSTF3-205ENST00000524775 MLH3Q9UHC1 1453 aa17.15■□□□□ 0.34
CSTF3-205ENST00000524775 FAM69CQ0P6D2 419 aa17.14■□□□□ 0.33
CSTF3-205ENST00000524775 FRMPD1Q5SYB0 1578 aa17.14■□□□□ 0.33
CSTF3-205ENST00000524775 NUP155O75694 1391 aa17.14■□□□□ 0.33
CSTF3-205ENST00000524775 EIF2AK4Q9P2K8 1649 aaKnown RBP17.14■□□□□ 0.33
CSTF3-205ENST00000524775 FAM135AQ9P2D6 1515 aa17.13■□□□□ 0.33
CSTF3-205ENST00000524775 NEUROD1Q13562 356 aa17.13■□□□□ 0.33
CSTF3-205ENST00000524775 FOXD1Q16676 465 aa17.13■□□□□ 0.33
CSTF3-205ENST00000524775 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
CSTF3-205ENST00000524775 HECW2Q9P2P5 1572 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms