RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 FANCAO15360 1455 aa12.19□□□□□ -0.46
NPAS4-202ENST00000524617 CCNB3Q8WWL7 1395 aa12.18□□□□□ -0.46
NPAS4-202ENST00000524617 MYOM3Q5VTT5 1437 aa12.17□□□□□ -0.46
NPAS4-202ENST00000524617 TSPOAP1O95153 1857 aa12.17□□□□□ -0.46
NPAS4-202ENST00000524617 ARHGAP5Q13017 1502 aa12.16□□□□□ -0.46
NPAS4-202ENST00000524617 MIA2Q96PC5 1412 aa12.16□□□□□ -0.46
NPAS4-202ENST00000524617 ABCC1P33527 1531 aa12.16□□□□□ -0.46
NPAS4-202ENST00000524617 AKNAQ7Z591 1439 aa12.15□□□□□ -0.46
NPAS4-202ENST00000524617 SAMD9LQ8IVG5 1584 aa12.14□□□□□ -0.47
NPAS4-202ENST00000524617 COL17A1Q9UMD9 1497 aaPredicted RBP12.14□□□□□ -0.47
NPAS4-202ENST00000524617 KDM6BO15054 1643 aa12.13□□□□□ -0.47
NPAS4-202ENST00000524617 EFCAB2Q5VUJ9 269 aa12.13□□□□□ -0.47
NPAS4-202ENST00000524617 ADGRL1O94910 1474 aa12.13□□□□□ -0.47
NPAS4-202ENST00000524617 PLEKHH2Q8IVE3 1493 aa12.13□□□□□ -0.47
NPAS4-202ENST00000524617 FRMPD1Q5SYB0 1578 aa12.13□□□□□ -0.47
NPAS4-202ENST00000524617 KIAA1107Q9UPP5 1409 aa12.12□□□□□ -0.47
NPAS4-202ENST00000524617 TCOF1Q13428 1488 aaKnown RBP12.12□□□□□ -0.47
NPAS4-202ENST00000524617 FGD6Q6ZV73 1430 aa12.11□□□□□ -0.47
NPAS4-202ENST00000524617 POGZQ7Z3K3 1410 aa12.11□□□□□ -0.47
NPAS4-202ENST00000524617 CAMSAP2Q08AD1 1489 aa12.11□□□□□ -0.47
NPAS4-202ENST00000524617 CFDP1Q9UEE9 299 aaPredicted RBP12.11□□□□□ -0.47
NPAS4-202ENST00000524617 ARHGEF12Q9NZN5 1544 aa12.11□□□□□ -0.47
NPAS4-202ENST00000524617 KDM5CP41229 1560 aa12.1□□□□□ -0.47
NPAS4-202ENST00000524617 DENND4BO75064 1496 aaPredicted RBP12.1□□□□□ -0.47
NPAS4-202ENST00000524617 ZMYM4Q5VZL5 1548 aa12.1□□□□□ -0.47
NPAS4-202ENST00000524617 SYCP2Q9BX26 1530 aa12.1□□□□□ -0.47
NPAS4-202ENST00000524617 MBD5Q9P267 1494 aa12.09□□□□□ -0.47
NPAS4-202ENST00000524617 RICTORQ6R327 1708 aa12.09□□□□□ -0.47
NPAS4-202ENST00000524617 SCAPERQ9BY12 1400 aa12.09□□□□□ -0.47
NPAS4-202ENST00000524617 ZNF518AQ6AHZ1 1483 aa12.08□□□□□ -0.47
NPAS4-202ENST00000524617 ARHGEF5Q12774 1597 aa12.08□□□□□ -0.48
NPAS4-202ENST00000524617 PTPN23Q9H3S7 1636 aa12.08□□□□□ -0.48
NPAS4-202ENST00000524617 RRBP1Q9P2E9 1410 aaKnown RBP12.07□□□□□ -0.48
NPAS4-202ENST00000524617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.05□□□□□ -0.48
NPAS4-202ENST00000524617 TRAPPC8Q9Y2L5 1435 aa12.05□□□□□ -0.48
NPAS4-202ENST00000524617 CCDC141Q6ZP82 1450 aa12.05□□□□□ -0.48
NPAS4-202ENST00000524617 MAGI2Q86UL8 1455 aa12.05□□□□□ -0.48
NPAS4-202ENST00000524617 ZNF644Q9H582 1327 aaPredicted RBP12.05□□□□□ -0.48
NPAS4-202ENST00000524617 MLH3Q9UHC1 1453 aa12.04□□□□□ -0.48
NPAS4-202ENST00000524617 SHANK2Q9UPX8 1470 aa12.03□□□□□ -0.48
NPAS4-202ENST00000524617 ARHGEF40Q8TER5 1519 aa12.03□□□□□ -0.48
NPAS4-202ENST00000524617 HECW2Q9P2P5 1572 aa12.03□□□□□ -0.48
NPAS4-202ENST00000524617 INO80Q9ULG1 1556 aaPredicted RBP12.03□□□□□ -0.48
NPAS4-202ENST00000524617 DNMT1P26358 1616 aaKnown RBP12.03□□□□□ -0.48
NPAS4-202ENST00000524617 ZFYVE16Q7Z3T8 1539 aa12.02□□□□□ -0.48
NPAS4-202ENST00000524617 MAST1Q9Y2H9 1570 aa12.02□□□□□ -0.49
NPAS4-202ENST00000524617 RAPGEF3O95398 923 aa12.02□□□□□ -0.49
NPAS4-202ENST00000524617 ZNF777Q9ULD5 760 aaPredicted RBP12.02□□□□□ -0.49
NPAS4-202ENST00000524617 CROCC2H7BZ55 1655 aa12.01□□□□□ -0.49
NPAS4-202ENST00000524617 SLC24A1O60721 1099 aa12.01□□□□□ -0.49
NPAS4-202ENST00000524617 RSPH4AQ5TD94 716 aa12.01□□□□□ -0.49
NPAS4-202ENST00000524617 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
NPAS4-202ENST00000524617 RTEL1-TNFRSF6BF6WH68 1400 aa12.01□□□□□ -0.49
NPAS4-202ENST00000524617 ABCC5O15440 1437 aa12□□□□□ -0.49
NPAS4-202ENST00000524617 DAPK1P53355 1430 aa12□□□□□ -0.49
NPAS4-202ENST00000524617 ATP7AQ04656 1500 aa12□□□□□ -0.49
NPAS4-202ENST00000524617 HNRNPMP52272 730 aaKnown RBP eCLIP11.99□□□□□ -0.49
NPAS4-202ENST00000524617 AFAP1Q8N556 730 aa11.99□□□□□ -0.49
NPAS4-202ENST00000524617 REREQ9P2R6 1566 aa11.99□□□□□ -0.49
NPAS4-202ENST00000524617 DIP2CQ9Y2E4 1556 aa11.99□□□□□ -0.49
NPAS4-202ENST00000524617 KIDINS220Q9ULH0 1771 aa11.99□□□□□ -0.49
NPAS4-202ENST00000524617 YEATS2Q9ULM3 1422 aa11.98□□□□□ -0.49
NPAS4-202ENST00000524617 ABCA6Q8N139 1617 aa11.97□□□□□ -0.49
NPAS4-202ENST00000524617 PLXNC1O60486 1568 aa11.97□□□□□ -0.49
NPAS4-202ENST00000524617 ADGRL2O95490 1459 aa11.97□□□□□ -0.49
NPAS4-202ENST00000524617 C9orf84Q5VXU9 1444 aa11.96□□□□□ -0.49
NPAS4-202ENST00000524617 SPAG9O60271 1321 aaKnown RBP11.95□□□□□ -0.5
NPAS4-202ENST00000524617 ATP10AO60312 1499 aa11.94□□□□□ -0.5
NPAS4-202ENST00000524617 PTPRKQ15262 1439 aa11.94□□□□□ -0.5
NPAS4-202ENST00000524617 AGLP35573 1532 aa11.93□□□□□ -0.5
NPAS4-202ENST00000524617 ROCK1Q13464 1354 aa11.92□□□□□ -0.5
NPAS4-202ENST00000524617 ADGBQ8N7X0 1667 aa11.92□□□□□ -0.5
NPAS4-202ENST00000524617 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
NPAS4-202ENST00000524617 TSPY4P0CV99 314 aa11.91□□□□□ -0.5
NPAS4-202ENST00000524617 TSPY10P0CW01 314 aa11.91□□□□□ -0.5
NPAS4-202ENST00000524617 NCOA1Q15788 1441 aa11.91□□□□□ -0.5
NPAS4-202ENST00000524617 SIGLEC1Q9BZZ2 1709 aa11.91□□□□□ -0.5
NPAS4-202ENST00000524617 A2MP01023 1474 aa11.9□□□□□ -0.5
NPAS4-202ENST00000524617 BCORL1Q5H9F3 1711 aa11.9□□□□□ -0.5
NPAS4-202ENST00000524617 DUOX2Q9NRD8 1548 aa11.9□□□□□ -0.5
NPAS4-202ENST00000524617 DHX29Q7Z478 1369 aaKnown RBP11.89□□□□□ -0.51
NPAS4-202ENST00000524617 ERBINQ96RT1 1412 aa11.88□□□□□ -0.51
NPAS4-202ENST00000524617 EIF2AK4Q9P2K8 1649 aaKnown RBP11.88□□□□□ -0.51
NPAS4-202ENST00000524617 ANKRD30AQ9BXX3 1397 aa11.88□□□□□ -0.51
NPAS4-202ENST00000524617 KIF15Q9NS87 1388 aa11.88□□□□□ -0.51
NPAS4-202ENST00000524617 RNF17Q9BXT8 1623 aaKnown RBP11.85□□□□□ -0.51
NPAS4-202ENST00000524617 FAM135AQ9P2D6 1515 aa11.85□□□□□ -0.51
NPAS4-202ENST00000524617 HFM1A2PYH4 1435 aa11.85□□□□□ -0.51
NPAS4-202ENST00000524617 GCC2Q8IWJ2 1684 aa11.84□□□□□ -0.51
NPAS4-202ENST00000524617 MYT1LQ9UL68 1186 aa11.83□□□□□ -0.52
NPAS4-202ENST00000524617 NAIPQ13075 1403 aa11.83□□□□□ -0.52
NPAS4-202ENST00000524617 DEPDC5O75140 1603 aa11.82□□□□□ -0.52
NPAS4-202ENST00000524617 MROH1Q8NDA8 1641 aa11.82□□□□□ -0.52
NPAS4-202ENST00000524617 PRDM15P57071 1507 aaPredicted RBP11.82□□□□□ -0.52
NPAS4-202ENST00000524617 ADAMTSL3P82987 1691 aa11.82□□□□□ -0.52
NPAS4-202ENST00000524617 CHIC2Q9UKJ5 165 aa11.82□□□□□ -0.52
NPAS4-202ENST00000524617 ANKRD50Q9ULJ7 1429 aa11.82□□□□□ -0.52
NPAS4-202ENST00000524617 KDM5DQ9BY66 1539 aa11.81□□□□□ -0.52
NPAS4-202ENST00000524617 RRP7BPQ9NSQ0 103 aa11.8□□□□□ -0.52
NPAS4-202ENST00000524617 UNC13BO14795 1591 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms