RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 ATP1B4Q9UN42 357 aaPredicted RBP10.73□□□□□ -0.69
NUP98-213ENST00000524563 FMN1Q68DA7 1419 aa10.72□□□□□ -0.69
NUP98-213ENST00000524563 ARHGAP5Q13017 1502 aa10.72□□□□□ -0.69
NUP98-213ENST00000524563 CLIP1P30622 1438 aa10.7□□□□□ -0.7
NUP98-213ENST00000524563 UBTFP17480 764 aaKnown RBP10.7□□□□□ -0.7
NUP98-213ENST00000524563 ITSN2Q9NZM3 1697 aa10.69□□□□□ -0.7
NUP98-213ENST00000524563 PREX2Q70Z35 1606 aa10.69□□□□□ -0.7
NUP98-213ENST00000524563 LMTK3Q96Q04 1460 aa10.69□□□□□ -0.7
NUP98-213ENST00000524563 CDC42BPBQ9Y5S2 1711 aa10.69□□□□□ -0.7
NUP98-213ENST00000524563 YEATS2Q9ULM3 1422 aa10.68□□□□□ -0.7
NUP98-213ENST00000524563 MAGI2Q86UL8 1455 aa10.68□□□□□ -0.7
NUP98-213ENST00000524563 C9orf84Q5VXU9 1444 aa10.67□□□□□ -0.7
NUP98-213ENST00000524563 CDC42BPAQ5VT25 1732 aa10.67□□□□□ -0.7
NUP98-213ENST00000524563 ARHGAP35Q9NRY4 1499 aa10.67□□□□□ -0.7
NUP98-213ENST00000524563 SCAPERQ9BY12 1400 aa10.67□□□□□ -0.7
NUP98-213ENST00000524563 MLECQ14165 292 aa10.66□□□□□ -0.7
NUP98-213ENST00000524563 MYT1LQ9UL68 1186 aa10.66□□□□□ -0.7
NUP98-213ENST00000524563 SUPT6HQ7KZ85 1726 aaKnown RBP10.66□□□□□ -0.7
NUP98-213ENST00000524563 ZNF518AQ6AHZ1 1483 aa10.66□□□□□ -0.7
NUP98-213ENST00000524563 ABCA6Q8N139 1617 aa10.66□□□□□ -0.7
NUP98-213ENST00000524563 CCDC18Q5T9S5 1454 aa10.65□□□□□ -0.7
NUP98-213ENST00000524563 SETD1BQ9UPS6 1966 aaKnown RBP10.65□□□□□ -0.71
NUP98-213ENST00000524563 DIP2CQ9Y2E4 1556 aa10.65□□□□□ -0.71
NUP98-213ENST00000524563 CDK11AQ9UQ88 783 aaPredicted RBP10.64□□□□□ -0.71
NUP98-213ENST00000524563 PLCH2O75038 1416 aa10.64□□□□□ -0.71
NUP98-213ENST00000524563 TROQ12816 1431 aaPredicted RBP10.64□□□□□ -0.71
NUP98-213ENST00000524563 KDM5CP41229 1560 aa10.64□□□□□ -0.71
NUP98-213ENST00000524563 ARHGEF12Q9NZN5 1544 aa10.63□□□□□ -0.71
NUP98-213ENST00000524563 C3P01024 1663 aa10.63□□□□□ -0.71
NUP98-213ENST00000524563 FBXO41Q8TF61 875 aa10.63□□□□□ -0.71
NUP98-213ENST00000524563 ABCC1P33527 1531 aa10.63□□□□□ -0.71
NUP98-213ENST00000524563 ATP10AO60312 1499 aa10.62□□□□□ -0.71
NUP98-213ENST00000524563 HSPA2P54652 639 aa10.6□□□□□ -0.71
NUP98-213ENST00000524563 EFCAB2Q5VUJ9 269 aa10.6□□□□□ -0.71
NUP98-213ENST00000524563 REREQ9P2R6 1566 aa10.59□□□□□ -0.71
NUP98-213ENST00000524563 KIDINS220Q9ULH0 1771 aa10.59□□□□□ -0.71
NUP98-213ENST00000524563 FYCO1Q9BQS8 1478 aa10.58□□□□□ -0.72
NUP98-213ENST00000524563 UHRF1BP1Q6BDS2 1440 aa10.58□□□□□ -0.72
NUP98-213ENST00000524563 MROH2AA6NES4 1674 aa10.57□□□□□ -0.72
NUP98-213ENST00000524563 SYCP2Q9BX26 1530 aa10.57□□□□□ -0.72
NUP98-213ENST00000524563 STRCQ7RTU9 1775 aa10.57□□□□□ -0.72
NUP98-213ENST00000524563 ESF1Q9H501 851 aaKnown RBP10.56□□□□□ -0.72
NUP98-213ENST00000524563 CASKIN1Q8WXD9 1431 aa10.56□□□□□ -0.72
NUP98-213ENST00000524563 CLTCQ00610 1675 aaKnown RBP10.55□□□□□ -0.72
NUP98-213ENST00000524563 SAMD9LQ8IVG5 1584 aa10.55□□□□□ -0.72
NUP98-213ENST00000524563 ADGBQ8N7X0 1667 aa10.54□□□□□ -0.72
NUP98-213ENST00000524563 CEP162Q5TB80 1403 aa10.54□□□□□ -0.72
NUP98-213ENST00000524563 ATP7AQ04656 1500 aa10.53□□□□□ -0.72
NUP98-213ENST00000524563 INO80Q9ULG1 1556 aaPredicted RBP10.52□□□□□ -0.72
NUP98-213ENST00000524563 MYO3AQ8NEV4 1616 aa10.52□□□□□ -0.73
NUP98-213ENST00000524563 MLH3Q9UHC1 1453 aa10.52□□□□□ -0.73
NUP98-213ENST00000524563 ZNF142P52746 1687 aaPredicted RBP10.52□□□□□ -0.73
NUP98-213ENST00000524563 AGLP35573 1532 aa10.52□□□□□ -0.73
NUP98-213ENST00000524563 TRAPPC8Q9Y2L5 1435 aa10.5□□□□□ -0.73
NUP98-213ENST00000524563 EHBP1L1Q8N3D4 1523 aa10.5□□□□□ -0.73
NUP98-213ENST00000524563 LOC105371045A0A1W2PR82 267 aa10.5□□□□□ -0.73
NUP98-213ENST00000524563 AFAP1Q8N556 730 aa10.5□□□□□ -0.73
NUP98-213ENST00000524563 ZNF777Q9ULD5 760 aaPredicted RBP10.5□□□□□ -0.73
NUP98-213ENST00000524563 CNTLNQ9NXG0 1405 aa10.5□□□□□ -0.73
NUP98-213ENST00000524563 CEBPAP49715 358 aaPredicted RBP10.49□□□□□ -0.73
NUP98-213ENST00000524563 PLEKHH2Q8IVE3 1493 aa10.49□□□□□ -0.73
NUP98-213ENST00000524563 SPATA31D1Q6ZQQ2 1576 aa10.48□□□□□ -0.73
NUP98-213ENST00000524563 POLR1AO95602 1720 aaPredicted RBP10.48□□□□□ -0.73
NUP98-213ENST00000524563 TIAM1Q13009 1591 aa10.48□□□□□ -0.73
NUP98-213ENST00000524563 CERKQ8TCT0 537 aa10.47□□□□□ -0.73
NUP98-213ENST00000524563 MTUS2Q5JR59 1369 aa10.47□□□□□ -0.73
NUP98-213ENST00000524563 PLXNC1O60486 1568 aa10.47□□□□□ -0.73
NUP98-213ENST00000524563 CAMSAP1Q5T5Y3 1602 aa10.47□□□□□ -0.73
NUP98-213ENST00000524563 PHF23Q9BUL5 403 aaPredicted RBP10.46□□□□□ -0.73
NUP98-213ENST00000524563 CCNB3Q8WWL7 1395 aa10.46□□□□□ -0.74
NUP98-213ENST00000524563 CEP170BQ9Y4F5 1589 aaPredicted RBP10.45□□□□□ -0.74
NUP98-213ENST00000524563 DMRT2Q9Y5R5 561 aa10.45□□□□□ -0.74
NUP98-213ENST00000524563 SPAG9O60271 1321 aaKnown RBP10.44□□□□□ -0.74
NUP98-213ENST00000524563 GPATCH8Q9UKJ3 1502 aaKnown RBP10.43□□□□□ -0.74
NUP98-213ENST00000524563 A2MP01023 1474 aa10.43□□□□□ -0.74
NUP98-213ENST00000524563 NPATQ14207 1427 aa10.42□□□□□ -0.74
NUP98-213ENST00000524563 PTPRTO14522 1441 aa10.41□□□□□ -0.74
NUP98-213ENST00000524563 NCOA1Q15788 1441 aa10.41□□□□□ -0.74
NUP98-213ENST00000524563 CFAP65Q6ZU64 1925 aaKnown RBP10.41□□□□□ -0.74
NUP98-213ENST00000524563 CFDP1Q9UEE9 299 aaPredicted RBP10.41□□□□□ -0.74
NUP98-213ENST00000524563 VPS8Q8N3P4 1428 aa10.41□□□□□ -0.74
NUP98-213ENST00000524563 DISP3Q9P2K9 1392 aa10.39□□□□□ -0.75
NUP98-213ENST00000524563 KIAA1107Q9UPP5 1409 aa10.39□□□□□ -0.75
NUP98-213ENST00000524563 CAMSAP2Q08AD1 1489 aa10.38□□□□□ -0.75
NUP98-213ENST00000524563 IQSEC2Q5JU85 1478 aa10.38□□□□□ -0.75
NUP98-213ENST00000524563 CCDC141Q6ZP82 1450 aa10.38□□□□□ -0.75
NUP98-213ENST00000524563 HNRNPMP52272 730 aaKnown RBP eCLIP10.38□□□□□ -0.75
NUP98-213ENST00000524563 KDM5DQ9BY66 1539 aa10.38□□□□□ -0.75
NUP98-213ENST00000524563 ZC3H13Q5T200 1668 aaKnown RBP10.38□□□□□ -0.75
NUP98-213ENST00000524563 LTBP4Q8N2S1 1624 aa10.37□□□□□ -0.75
NUP98-213ENST00000524563 CEP152O94986 1710 aa10.37□□□□□ -0.75
NUP98-213ENST00000524563 PLA2R1Q13018 1463 aa10.36□□□□□ -0.75
NUP98-213ENST00000524563 GGT6Q6P531 493 aa10.36□□□□□ -0.75
NUP98-213ENST00000524563 FAM135AQ9P2D6 1515 aa10.36□□□□□ -0.75
NUP98-213ENST00000524563 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
NUP98-213ENST00000524563 DNMT1P26358 1616 aaKnown RBP10.35□□□□□ -0.75
NUP98-213ENST00000524563 NCOA2Q15596 1464 aa10.35□□□□□ -0.75
NUP98-213ENST00000524563 A2ML1A8K2U0 1454 aa10.34□□□□□ -0.75
NUP98-213ENST00000524563 CROCC2H7BZ55 1655 aa10.34□□□□□ -0.75
NUP98-213ENST00000524563 PTPRKQ15262 1439 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms