RNA–Protein interactions for RNA: ENST00000524478.1

MMP3-203, Transcript of matrix metallopeptidase 3, humanhuman

TSL 4

Gene MMP3, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-203ENST00000524478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
MMP3-203ENST00000524478 HNRNPUL2Q1KMD3 747 aaKnown RBP16.19■□□□□ 0.18
MMP3-203ENST00000524478 KIF14Q15058 1648 aa16.16■□□□□ 0.18
MMP3-203ENST00000524478 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
MMP3-203ENST00000524478 KDM5CP41229 1560 aa16.14■□□□□ 0.17
MMP3-203ENST00000524478 C9orf84Q5VXU9 1444 aa16.14■□□□□ 0.17
MMP3-203ENST00000524478 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
MMP3-203ENST00000524478 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
MMP3-203ENST00000524478 LRRIQ1Q96JM4 1722 aa16.13■□□□□ 0.17
MMP3-203ENST00000524478 SCAPERQ9BY12 1400 aa16.12■□□□□ 0.17
MMP3-203ENST00000524478 RANGAP1P46060 587 aaPredicted RBP16.12■□□□□ 0.17
MMP3-203ENST00000524478 CERKQ8TCT0 537 aa16.12■□□□□ 0.17
MMP3-203ENST00000524478 DIP2CQ9Y2E4 1556 aa16.12■□□□□ 0.17
MMP3-203ENST00000524478 ABCA6Q8N139 1617 aa16.12■□□□□ 0.17
MMP3-203ENST00000524478 PLCH2O75038 1416 aa16.11■□□□□ 0.17
MMP3-203ENST00000524478 EEA1Q15075 1411 aa16.11■□□□□ 0.17
MMP3-203ENST00000524478 ATP10AO60312 1499 aa16.1■□□□□ 0.17
MMP3-203ENST00000524478 PLEKHD1A6NEE1 506 aa16.1■□□□□ 0.17
MMP3-203ENST00000524478 C3P01024 1663 aa16.09■□□□□ 0.17
MMP3-203ENST00000524478 MLECQ14165 292 aa16.09■□□□□ 0.17
MMP3-203ENST00000524478 SPATA31D1Q6ZQQ2 1576 aa16.08■□□□□ 0.16
MMP3-203ENST00000524478 REREQ9P2R6 1566 aa16.08■□□□□ 0.16
MMP3-203ENST00000524478 ZNF518AQ6AHZ1 1483 aa16.06■□□□□ 0.16
MMP3-203ENST00000524478 CDC42BPBQ9Y5S2 1711 aa16.05■□□□□ 0.16
MMP3-203ENST00000524478 SETD1BQ9UPS6 1966 aaKnown RBP16.05■□□□□ 0.16
MMP3-203ENST00000524478 ITSN2Q9NZM3 1697 aa16.03■□□□□ 0.16
MMP3-203ENST00000524478 ILDR2Q71H61 639 aa16.03■□□□□ 0.16
MMP3-203ENST00000524478 PREX2Q70Z35 1606 aa16.03■□□□□ 0.16
MMP3-203ENST00000524478 ARHGAP5Q13017 1502 aa16.03■□□□□ 0.16
MMP3-203ENST00000524478 UHRF1BP1Q6BDS2 1440 aa16.02■□□□□ 0.16
MMP3-203ENST00000524478 CEBPAP49715 358 aaPredicted RBP16.02■□□□□ 0.16
MMP3-203ENST00000524478 ABCC1P33527 1531 aa16.02■□□□□ 0.15
MMP3-203ENST00000524478 LTBP4Q8N2S1 1624 aa16.01■□□□□ 0.15
MMP3-203ENST00000524478 ARHGAP35Q9NRY4 1499 aa16.01■□□□□ 0.15
MMP3-203ENST00000524478 DISP3Q9P2K9 1392 aa16■□□□□ 0.15
MMP3-203ENST00000524478 KIDINS220Q9ULH0 1771 aa15.99■□□□□ 0.15
MMP3-203ENST00000524478 TROQ12816 1431 aaPredicted RBP15.99■□□□□ 0.15
MMP3-203ENST00000524478 AGLP35573 1532 aa15.98■□□□□ 0.15
MMP3-203ENST00000524478 FMN1Q68DA7 1419 aa15.97■□□□□ 0.15
MMP3-203ENST00000524478 CDC42BPAQ5VT25 1732 aa15.97■□□□□ 0.15
MMP3-203ENST00000524478 PTPRTO14522 1441 aa15.96■□□□□ 0.15
MMP3-203ENST00000524478 MLH3Q9UHC1 1453 aa15.96■□□□□ 0.14
MMP3-203ENST00000524478 MROH2AA6NES4 1674 aa15.95■□□□□ 0.14
MMP3-203ENST00000524478 NCOA1Q15788 1441 aa15.94■□□□□ 0.14
MMP3-203ENST00000524478 EFCAB2Q5VUJ9 269 aa15.94■□□□□ 0.14
MMP3-203ENST00000524478 TRAPPC8Q9Y2L5 1435 aa15.94■□□□□ 0.14
MMP3-203ENST00000524478 AFAP1Q8N556 730 aa15.93■□□□□ 0.14
MMP3-203ENST00000524478 ZNF142P52746 1687 aaPredicted RBP15.92■□□□□ 0.14
MMP3-203ENST00000524478 SOCS7O14512 581 aa15.92■□□□□ 0.14
MMP3-203ENST00000524478 IQSEC2Q5JU85 1478 aa15.91■□□□□ 0.14
MMP3-203ENST00000524478 MYO3AQ8NEV4 1616 aa15.91■□□□□ 0.14
MMP3-203ENST00000524478 CLIP1P30622 1438 aa15.9■□□□□ 0.14
MMP3-203ENST00000524478 CAMSAP1Q5T5Y3 1602 aa15.9■□□□□ 0.14
MMP3-203ENST00000524478 SAMD9LQ8IVG5 1584 aa15.89■□□□□ 0.13
MMP3-203ENST00000524478 PLXNC1O60486 1568 aa15.87■□□□□ 0.13
MMP3-203ENST00000524478 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
MMP3-203ENST00000524478 SYCP2Q9BX26 1530 aa15.87■□□□□ 0.13
MMP3-203ENST00000524478 CLTCQ00610 1675 aaKnown RBP15.86■□□□□ 0.13
MMP3-203ENST00000524478 SUPT6HQ7KZ85 1726 aaKnown RBP15.86■□□□□ 0.13
MMP3-203ENST00000524478 INO80Q9ULG1 1556 aaPredicted RBP15.86■□□□□ 0.13
MMP3-203ENST00000524478 CNTLNQ9NXG0 1405 aa15.85■□□□□ 0.13
MMP3-203ENST00000524478 ATP1B4Q9UN42 357 aaPredicted RBP15.84■□□□□ 0.13
MMP3-203ENST00000524478 NPATQ14207 1427 aa15.84■□□□□ 0.13
MMP3-203ENST00000524478 CCDC18Q5T9S5 1454 aa15.84■□□□□ 0.13
MMP3-203ENST00000524478 CEP170BQ9Y4F5 1589 aaPredicted RBP15.83■□□□□ 0.12
MMP3-203ENST00000524478 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
MMP3-203ENST00000524478 CDK11AQ9UQ88 783 aaPredicted RBP15.82■□□□□ 0.12
MMP3-203ENST00000524478 ATP7AQ04656 1500 aa15.81■□□□□ 0.12
MMP3-203ENST00000524478 CASKIN1Q8WXD9 1431 aa15.81■□□□□ 0.12
MMP3-203ENST00000524478 PLA2R1Q13018 1463 aa15.79■□□□□ 0.12
MMP3-203ENST00000524478 TCOF1Q13428 1488 aaKnown RBP15.79■□□□□ 0.12
MMP3-203ENST00000524478 MSH5O43196 834 aa15.78■□□□□ 0.12
MMP3-203ENST00000524478 MYT1LQ9UL68 1186 aa15.78■□□□□ 0.12
MMP3-203ENST00000524478 FYCO1Q9BQS8 1478 aa15.77■□□□□ 0.11
MMP3-203ENST00000524478 ZNF335Q9H4Z2 1342 aaPredicted RBP15.76■□□□□ 0.11
MMP3-203ENST00000524478 UBTFP17480 764 aaKnown RBP15.76■□□□□ 0.11
MMP3-203ENST00000524478 POLR1AO95602 1720 aaPredicted RBP15.76■□□□□ 0.11
MMP3-203ENST00000524478 ADGBQ8N7X0 1667 aa15.75■□□□□ 0.11
MMP3-203ENST00000524478 PTPRKQ15262 1439 aa15.75■□□□□ 0.11
MMP3-203ENST00000524478 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
MMP3-203ENST00000524478 NEURL4Q96JN8 1562 aa15.74■□□□□ 0.11
MMP3-203ENST00000524478 MED1Q15648 1581 aaPredicted RBP15.73■□□□□ 0.11
MMP3-203ENST00000524478 ZMYM3Q14202 1370 aa15.73■□□□□ 0.11
MMP3-203ENST00000524478 NCKAP5LQ9HCH0 1330 aa15.72■□□□□ 0.11
MMP3-203ENST00000524478 ESF1Q9H501 851 aaKnown RBP15.72■□□□□ 0.11
MMP3-203ENST00000524478 DNMT1P26358 1616 aaKnown RBP15.72■□□□□ 0.11
MMP3-203ENST00000524478 A2MP01023 1474 aa15.71■□□□□ 0.11
MMP3-203ENST00000524478 TIAM1Q13009 1591 aa15.69■□□□□ 0.1
MMP3-203ENST00000524478 KIAA1107Q9UPP5 1409 aa15.68■□□□□ 0.1
MMP3-203ENST00000524478 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
MMP3-203ENST00000524478 SPAG9O60271 1321 aaKnown RBP15.68■□□□□ 0.1
MMP3-203ENST00000524478 A2ML1A8K2U0 1454 aa15.67■□□□□ 0.1
MMP3-203ENST00000524478 PLEKHH2Q8IVE3 1493 aa15.66■□□□□ 0.1
MMP3-203ENST00000524478 UBAP1LF5GYI3 381 aa15.66■□□□□ 0.1
MMP3-203ENST00000524478 VWDEQ8N2E2 1590 aa15.64■□□□□ 0.09
MMP3-203ENST00000524478 ZNF777Q9ULD5 760 aaPredicted RBP15.64■□□□□ 0.09
MMP3-203ENST00000524478 HNRNPMP52272 730 aaKnown RBP eCLIP15.63■□□□□ 0.09
MMP3-203ENST00000524478 PKD2Q13563 968 aa15.63■□□□□ 0.09
MMP3-203ENST00000524478 MBD5Q9P267 1494 aa15.62■□□□□ 0.09
MMP3-203ENST00000524478 CPS1P31327 1500 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms