RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 RAPGEF3O95398 923 aa15.92■□□□□ 0.14
TTC39A-213ENST00000524442 PREX2Q70Z35 1606 aa15.91■□□□□ 0.14
TTC39A-213ENST00000524442 CCNB3Q8WWL7 1395 aa15.91■□□□□ 0.14
TTC39A-213ENST00000524442 GPATCH8Q9UKJ3 1502 aaKnown RBP15.91■□□□□ 0.14
TTC39A-213ENST00000524442 LRRC9Q6ZRR7 1453 aa15.91■□□□□ 0.14
TTC39A-213ENST00000524442 SCAPERQ9BY12 1400 aa15.9■□□□□ 0.14
TTC39A-213ENST00000524442 CDC42BPBQ9Y5S2 1711 aa15.88■□□□□ 0.13
TTC39A-213ENST00000524442 CFDP1Q9UEE9 299 aaPredicted RBP15.88■□□□□ 0.13
TTC39A-213ENST00000524442 CDC42BPAQ5VT25 1732 aa15.88■□□□□ 0.13
TTC39A-213ENST00000524442 POGZQ7Z3K3 1410 aa15.87■□□□□ 0.13
TTC39A-213ENST00000524442 SUPT6HQ7KZ85 1726 aaKnown RBP15.87■□□□□ 0.13
TTC39A-213ENST00000524442 FRMPD1Q5SYB0 1578 aa15.87■□□□□ 0.13
TTC39A-213ENST00000524442 NCOA2Q15596 1464 aa15.86■□□□□ 0.13
TTC39A-213ENST00000524442 RICTORQ6R327 1708 aa15.85■□□□□ 0.13
TTC39A-213ENST00000524442 MAGI2Q86UL8 1455 aa15.85■□□□□ 0.13
TTC39A-213ENST00000524442 ZMYM4Q5VZL5 1548 aa15.85■□□□□ 0.13
TTC39A-213ENST00000524442 KANK4Q5T7N3 995 aaPredicted RBP15.85■□□□□ 0.13
TTC39A-213ENST00000524442 ZNF518AQ6AHZ1 1483 aa15.84■□□□□ 0.13
TTC39A-213ENST00000524442 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
TTC39A-213ENST00000524442 KIAA1107Q9UPP5 1409 aa15.84■□□□□ 0.13
TTC39A-213ENST00000524442 ZNF777Q9ULD5 760 aaPredicted RBP15.83■□□□□ 0.12
TTC39A-213ENST00000524442 ABCC1P33527 1531 aa15.83■□□□□ 0.12
TTC39A-213ENST00000524442 ITSN2Q9NZM3 1697 aa15.83■□□□□ 0.12
TTC39A-213ENST00000524442 AFAP1Q8N556 730 aa15.8■□□□□ 0.12
TTC39A-213ENST00000524442 KDM5CP41229 1560 aa15.79■□□□□ 0.12
TTC39A-213ENST00000524442 SAMD9LQ8IVG5 1584 aa15.79■□□□□ 0.12
TTC39A-213ENST00000524442 ARHGEF12Q9NZN5 1544 aa15.79■□□□□ 0.12
TTC39A-213ENST00000524442 ZFYVE16Q7Z3T8 1539 aa15.78■□□□□ 0.12
TTC39A-213ENST00000524442 ARHGEF40Q8TER5 1519 aa15.78■□□□□ 0.12
TTC39A-213ENST00000524442 MLH3Q9UHC1 1453 aa15.78■□□□□ 0.12
TTC39A-213ENST00000524442 TRAPPC8Q9Y2L5 1435 aa15.77■□□□□ 0.12
TTC39A-213ENST00000524442 MIA2Q96PC5 1412 aa15.77■□□□□ 0.11
TTC39A-213ENST00000524442 HNRNPMP52272 730 aaKnown RBP eCLIP15.76■□□□□ 0.11
TTC39A-213ENST00000524442 RSPH4AQ5TD94 716 aa15.76■□□□□ 0.11
TTC39A-213ENST00000524442 SYCP2Q9BX26 1530 aa15.76■□□□□ 0.11
TTC39A-213ENST00000524442 MYOM3Q5VTT5 1437 aa15.76■□□□□ 0.11
TTC39A-213ENST00000524442 YEATS2Q9ULM3 1422 aa15.75■□□□□ 0.11
TTC39A-213ENST00000524442 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
TTC39A-213ENST00000524442 HECW2Q9P2P5 1572 aa15.74■□□□□ 0.11
TTC39A-213ENST00000524442 ATP10AO60312 1499 aa15.73■□□□□ 0.11
TTC39A-213ENST00000524442 MBD5Q9P267 1494 aa15.73■□□□□ 0.11
TTC39A-213ENST00000524442 KDM4FA0A1W2PPD8 638 aa15.73■□□□□ 0.11
TTC39A-213ENST00000524442 MYT1LQ9UL68 1186 aa15.73■□□□□ 0.11
TTC39A-213ENST00000524442 CAMSAP2Q08AD1 1489 aa15.72■□□□□ 0.11
TTC39A-213ENST00000524442 SPAG9O60271 1321 aaKnown RBP15.72■□□□□ 0.11
TTC39A-213ENST00000524442 C9orf84Q5VXU9 1444 aa15.71■□□□□ 0.11
TTC39A-213ENST00000524442 AEBP2Q6ZN18 517 aaPredicted RBP15.71■□□□□ 0.11
TTC39A-213ENST00000524442 ARID4BQ4LE39 1312 aaPredicted RBP15.7■□□□□ 0.1
TTC39A-213ENST00000524442 CCDC141Q6ZP82 1450 aa15.69■□□□□ 0.1
TTC39A-213ENST00000524442 RTEL1-TNFRSF6BF6WH68 1400 aa15.68■□□□□ 0.1
TTC39A-213ENST00000524442 REREQ9P2R6 1566 aa15.68■□□□□ 0.1
TTC39A-213ENST00000524442 ARHGEF5Q12774 1597 aa15.67■□□□□ 0.1
TTC39A-213ENST00000524442 DIP2CQ9Y2E4 1556 aa15.67■□□□□ 0.1
TTC39A-213ENST00000524442 FGD6Q6ZV73 1430 aa15.67■□□□□ 0.1
TTC39A-213ENST00000524442 KIDINS220Q9ULH0 1771 aa15.67■□□□□ 0.1
TTC39A-213ENST00000524442 TSPY4P0CV99 314 aa15.66■□□□□ 0.1
TTC39A-213ENST00000524442 TSPY10P0CW01 314 aa15.66■□□□□ 0.1
TTC39A-213ENST00000524442 ATP7AQ04656 1500 aa15.66■□□□□ 0.1
TTC39A-213ENST00000524442 INO80Q9ULG1 1556 aaPredicted RBP15.65■□□□□ 0.1
TTC39A-213ENST00000524442 ABCA6Q8N139 1617 aa15.65■□□□□ 0.1
TTC39A-213ENST00000524442 AGLP35573 1532 aa15.63■□□□□ 0.09
TTC39A-213ENST00000524442 BCORL1Q5H9F3 1711 aa15.63■□□□□ 0.09
TTC39A-213ENST00000524442 TCOF1Q13428 1488 aaKnown RBP15.63■□□□□ 0.09
TTC39A-213ENST00000524442 PTPN23Q9H3S7 1636 aa15.62■□□□□ 0.09
TTC39A-213ENST00000524442 ADAMTSL3P82987 1691 aa15.62■□□□□ 0.09
TTC39A-213ENST00000524442 SIGLEC1Q9BZZ2 1709 aa15.6■□□□□ 0.09
TTC39A-213ENST00000524442 A2MP01023 1474 aa15.59■□□□□ 0.09
TTC39A-213ENST00000524442 MAST1Q9Y2H9 1570 aa15.58■□□□□ 0.09
TTC39A-213ENST00000524442 DHX29Q7Z478 1369 aaKnown RBP15.58■□□□□ 0.08
TTC39A-213ENST00000524442 SHANK2Q9UPX8 1470 aa15.58■□□□□ 0.08
TTC39A-213ENST00000524442 ADGBQ8N7X0 1667 aa15.57■□□□□ 0.08
TTC39A-213ENST00000524442 MLECQ14165 292 aa15.57■□□□□ 0.08
TTC39A-213ENST00000524442 ABCC5O15440 1437 aa15.57■□□□□ 0.08
TTC39A-213ENST00000524442 PLXNC1O60486 1568 aa15.57■□□□□ 0.08
TTC39A-213ENST00000524442 DAPK1P53355 1430 aa15.56■□□□□ 0.08
TTC39A-213ENST00000524442 MADDQ8WXG6 1647 aa15.55■□□□□ 0.08
TTC39A-213ENST00000524442 PTPRMP28827 1452 aa15.55■□□□□ 0.08
TTC39A-213ENST00000524442 DNMT1P26358 1616 aaKnown RBP15.54■□□□□ 0.08
TTC39A-213ENST00000524442 FAM50AQ14320 339 aaKnown RBP15.54■□□□□ 0.08
TTC39A-213ENST00000524442 PPARGC1BQ86YN6 1023 aaKnown RBP15.54■□□□□ 0.08
TTC39A-213ENST00000524442 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
TTC39A-213ENST00000524442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.53■□□□□ 0.08
TTC39A-213ENST00000524442 ESF1Q9H501 851 aaKnown RBP15.53■□□□□ 0.08
TTC39A-213ENST00000524442 CNTLNQ9NXG0 1405 aa15.51■□□□□ 0.07
TTC39A-213ENST00000524442 CROCC2H7BZ55 1655 aa15.51■□□□□ 0.07
TTC39A-213ENST00000524442 ANKRD30AQ9BXX3 1397 aa15.49■□□□□ 0.07
TTC39A-213ENST00000524442 FER1L4A9Z1Z3 1794 aa15.49■□□□□ 0.07
TTC39A-213ENST00000524442 RIMS1Q86UR5 1692 aaKnown RBP15.49■□□□□ 0.07
TTC39A-213ENST00000524442 DUOX2Q9NRD8 1548 aa15.48■□□□□ 0.07
TTC39A-213ENST00000524442 KIF3BO15066 747 aa15.48■□□□□ 0.07
TTC39A-213ENST00000524442 GGT6Q6P531 493 aa15.48■□□□□ 0.07
TTC39A-213ENST00000524442 KIF15Q9NS87 1388 aa15.48■□□□□ 0.07
TTC39A-213ENST00000524442 NCOA1Q15788 1441 aa15.47■□□□□ 0.07
TTC39A-213ENST00000524442 RRBP1Q9P2E9 1410 aaKnown RBP15.47■□□□□ 0.07
TTC39A-213ENST00000524442 ADGRL2O95490 1459 aa15.46■□□□□ 0.07
TTC39A-213ENST00000524442 RRP7BPQ9NSQ0 103 aa15.46■□□□□ 0.07
TTC39A-213ENST00000524442 FAM135AQ9P2D6 1515 aa15.46■□□□□ 0.07
TTC39A-213ENST00000524442 ERBINQ96RT1 1412 aa15.45■□□□□ 0.06
TTC39A-213ENST00000524442 CHIC2Q9UKJ5 165 aa15.45■□□□□ 0.06
TTC39A-213ENST00000524442 EIF2AK4Q9P2K8 1649 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms