RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 ILDR1Q86SU0 546 aaPredicted RBP12.87□□□□□ -0.35
NECTIN1-204ENST00000524429 SHROOM2Q13796 1616 aa12.86□□□□□ -0.35
NECTIN1-204ENST00000524429 CEP162Q5TB80 1403 aa12.86□□□□□ -0.35
NECTIN1-204ENST00000524429 UGGT2Q9NYU1 1516 aa12.85□□□□□ -0.35
NECTIN1-204ENST00000524429 UBTFP17480 764 aaKnown RBP12.85□□□□□ -0.35
NECTIN1-204ENST00000524429 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
NECTIN1-204ENST00000524429 OTUD5Q96G74 571 aa12.81□□□□□ -0.36
NECTIN1-204ENST00000524429 CLIP1P30622 1438 aa12.8□□□□□ -0.36
NECTIN1-204ENST00000524429 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
NECTIN1-204ENST00000524429 POTEB2H3BUK9 544 aa12.79□□□□□ -0.36
NECTIN1-204ENST00000524429 PHF12Q96QT6 1004 aa12.79□□□□□ -0.36
NECTIN1-204ENST00000524429 ARHGAP35Q9NRY4 1499 aa12.78□□□□□ -0.36
NECTIN1-204ENST00000524429 KIAA0556O60303 1618 aa12.78□□□□□ -0.36
NECTIN1-204ENST00000524429 PLCB2Q00722 1185 aa12.78□□□□□ -0.36
NECTIN1-204ENST00000524429 DISP1Q96F81 1524 aa12.75□□□□□ -0.37
NECTIN1-204ENST00000524429 KIF13AQ9H1H9 1805 aa12.74□□□□□ -0.37
NECTIN1-204ENST00000524429 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
NECTIN1-204ENST00000524429 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
NECTIN1-204ENST00000524429 CARMIL2Q6F5E8 1435 aa12.71□□□□□ -0.38
NECTIN1-204ENST00000524429 VPS8Q8N3P4 1428 aa12.71□□□□□ -0.38
NECTIN1-204ENST00000524429 PELP1Q8IZL8 1130 aaKnown RBP12.7□□□□□ -0.38
NECTIN1-204ENST00000524429 FMN1Q68DA7 1419 aa12.69□□□□□ -0.38
NECTIN1-204ENST00000524429 FBXO3Q9UK99 471 aa12.68□□□□□ -0.38
NECTIN1-204ENST00000524429 POTEMA6NI47 508 aa12.67□□□□□ -0.38
NECTIN1-204ENST00000524429 BCANQ96GW7 911 aa12.67□□□□□ -0.38
NECTIN1-204ENST00000524429 JPH4Q96JJ6 628 aa12.67□□□□□ -0.38
NECTIN1-204ENST00000524429 FYCO1Q9BQS8 1478 aa12.66□□□□□ -0.38
NECTIN1-204ENST00000524429 FAM69CQ0P6D2 419 aa12.66□□□□□ -0.38
NECTIN1-204ENST00000524429 PCF11O94913 1555 aaKnown RBP12.65□□□□□ -0.38
NECTIN1-204ENST00000524429 FHOD3Q2V2M9 1422 aa12.65□□□□□ -0.38
NECTIN1-204ENST00000524429 PRG4Q92954 1404 aaPredicted RBP12.65□□□□□ -0.38
NECTIN1-204ENST00000524429 CFAP43Q8NDM7 1665 aa12.64□□□□□ -0.39
NECTIN1-204ENST00000524429 LRRIQ1Q96JM4 1722 aa12.64□□□□□ -0.39
NECTIN1-204ENST00000524429 MAP3K1Q13233 1512 aa12.63□□□□□ -0.39
NECTIN1-204ENST00000524429 HECW1Q76N89 1606 aa12.63□□□□□ -0.39
NECTIN1-204ENST00000524429 RAPGEF6Q8TEU7 1601 aa12.63□□□□□ -0.39
NECTIN1-204ENST00000524429 CASKIN1Q8WXD9 1431 aa12.62□□□□□ -0.39
NECTIN1-204ENST00000524429 ABCC10Q5T3U5 1492 aa12.62□□□□□ -0.39
NECTIN1-204ENST00000524429 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
NECTIN1-204ENST00000524429 POTEGQ6S5H5 508 aa12.62□□□□□ -0.39
NECTIN1-204ENST00000524429 ABCA8O94911 1581 aa12.61□□□□□ -0.39
NECTIN1-204ENST00000524429 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
NECTIN1-204ENST00000524429 KDM6BO15054 1643 aa12.59□□□□□ -0.39
NECTIN1-204ENST00000524429 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
NECTIN1-204ENST00000524429 CCDC18Q5T9S5 1454 aa12.58□□□□□ -0.4
NECTIN1-204ENST00000524429 TIAM1Q13009 1591 aa12.57□□□□□ -0.4
NECTIN1-204ENST00000524429 DIP2BQ9P265 1576 aa12.57□□□□□ -0.4
NECTIN1-204ENST00000524429 RANGAP1P46060 587 aaPredicted RBP12.57□□□□□ -0.4
NECTIN1-204ENST00000524429 METRNQ9UJH8 293 aa12.57□□□□□ -0.4
NECTIN1-204ENST00000524429 UHRF1BP1LA0JNW5 1464 aa12.55□□□□□ -0.4
NECTIN1-204ENST00000524429 ABCC2Q92887 1545 aa12.55□□□□□ -0.4
NECTIN1-204ENST00000524429 PTPRGP23470 1445 aa12.54□□□□□ -0.4
NECTIN1-204ENST00000524429 MAPKBP1O60336 1514 aa12.54□□□□□ -0.4
NECTIN1-204ENST00000524429 ATMINO43313 823 aaPredicted RBP12.54□□□□□ -0.4
NECTIN1-204ENST00000524429 ASTLQ6HA08 431 aaPredicted RBP12.54□□□□□ -0.4
NECTIN1-204ENST00000524429 NUP153P49790 1475 aaKnown RBP12.53□□□□□ -0.4
NECTIN1-204ENST00000524429 P3H3Q8IVL6 736 aa12.53□□□□□ -0.4
NECTIN1-204ENST00000524429 PLB1Q6P1J6 1458 aa12.53□□□□□ -0.4
NECTIN1-204ENST00000524429 EPRSP07814 1512 aaKnown RBP12.52□□□□□ -0.4
NECTIN1-204ENST00000524429 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
NECTIN1-204ENST00000524429 C7P10643 843 aa12.52□□□□□ -0.41
NECTIN1-204ENST00000524429 SLC39A7Q92504 469 aa12.52□□□□□ -0.41
NECTIN1-204ENST00000524429 TSPYL2Q9H2G4 693 aaPredicted RBP12.51□□□□□ -0.41
NECTIN1-204ENST00000524429 UACAQ9BZF9 1416 aa12.51□□□□□ -0.41
NECTIN1-204ENST00000524429 ADCY10Q96PN6 1610 aa12.51□□□□□ -0.41
NECTIN1-204ENST00000524429 TSPOAP1O95153 1857 aa12.51□□□□□ -0.41
NECTIN1-204ENST00000524429 VSIG10Q8N0Z9 540 aa12.5□□□□□ -0.41
NECTIN1-204ENST00000524429 ZCCHC11Q5TAX3 1644 aaKnown RBP12.48□□□□□ -0.41
NECTIN1-204ENST00000524429 ADGRL1O94910 1474 aa12.48□□□□□ -0.41
NECTIN1-204ENST00000524429 PROM2Q8N271 834 aa12.48□□□□□ -0.41
NECTIN1-204ENST00000524429 HECW2Q9P2P5 1572 aa12.47□□□□□ -0.41
NECTIN1-204ENST00000524429 EHBP1L1Q8N3D4 1523 aa12.47□□□□□ -0.41
NECTIN1-204ENST00000524429 KDM5BQ9UGL1 1544 aa12.47□□□□□ -0.41
NECTIN1-204ENST00000524429 TAOK2Q9UL54 1235 aa12.47□□□□□ -0.41
NECTIN1-204ENST00000524429 LRRC9Q6ZRR7 1453 aa12.46□□□□□ -0.41
NECTIN1-204ENST00000524429 SUPT6HQ7KZ85 1726 aaKnown RBP12.46□□□□□ -0.41
NECTIN1-204ENST00000524429 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
NECTIN1-204ENST00000524429 CDK13Q14004 1512 aaKnown RBP12.46□□□□□ -0.42
NECTIN1-204ENST00000524429 TTBK1Q5TCY1 1321 aaPredicted RBP12.45□□□□□ -0.42
NECTIN1-204ENST00000524429 MAMSTRQ6ZN01 415 aa12.45□□□□□ -0.42
NECTIN1-204ENST00000524429 FAM163AQ96GL9 167 aaPredicted RBP12.44□□□□□ -0.42
NECTIN1-204ENST00000524429 ATP10BO94823 1461 aa12.43□□□□□ -0.42
NECTIN1-204ENST00000524429 ATN1P54259 1190 aaPredicted RBP12.43□□□□□ -0.42
NECTIN1-204ENST00000524429 MAGI3Q5TCQ9 1506 aa12.42□□□□□ -0.42
NECTIN1-204ENST00000524429 PRKCSHP14314 528 aaPredicted RBP12.41□□□□□ -0.42
NECTIN1-204ENST00000524429 PCDH10Q9P2E7 1040 aa12.41□□□□□ -0.42
NECTIN1-204ENST00000524429 KIF14Q15058 1648 aa12.4□□□□□ -0.42
NECTIN1-204ENST00000524429 ITSN2Q9NZM3 1697 aa12.39□□□□□ -0.43
NECTIN1-204ENST00000524429 CCDC61Q9Y6R9 512 aa12.39□□□□□ -0.43
NECTIN1-204ENST00000524429 TROQ12816 1431 aaPredicted RBP12.38□□□□□ -0.43
NECTIN1-204ENST00000524429 FBXO41Q8TF61 875 aa12.38□□□□□ -0.43
NECTIN1-204ENST00000524429 CDK11AQ9UQ88 783 aaPredicted RBP12.38□□□□□ -0.43
NECTIN1-204ENST00000524429 SCUBE2Q9NQ36 999 aa12.37□□□□□ -0.43
NECTIN1-204ENST00000524429 MTUS2Q5JR59 1369 aa12.37□□□□□ -0.43
NECTIN1-204ENST00000524429 PPRC1Q5VV67 1664 aaKnown RBP12.36□□□□□ -0.43
NECTIN1-204ENST00000524429 COL17A1Q9UMD9 1497 aaPredicted RBP12.36□□□□□ -0.43
NECTIN1-204ENST00000524429 VASPP50552 380 aaPredicted RBP12.36□□□□□ -0.43
NECTIN1-204ENST00000524429 LCE2DQ5TA82 110 aaPredicted RBP12.36□□□□□ -0.43
NECTIN1-204ENST00000524429 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
NECTIN1-204ENST00000524429 CDC42BPAQ5VT25 1732 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms