RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 MYO5CQ9NQX4 1742 aa20.24■□□□□ 0.83
HDAC2-217ENST00000524334 MAGI2Q86UL8 1455 aa20.24■□□□□ 0.83
HDAC2-217ENST00000524334 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
HDAC2-217ENST00000524334 POGZQ7Z3K3 1410 aa20.24■□□□□ 0.83
HDAC2-217ENST00000524334 FRMPD1Q5SYB0 1578 aa20.23■□□□□ 0.83
HDAC2-217ENST00000524334 GPATCH8Q9UKJ3 1502 aaKnown RBP20.22■□□□□ 0.83
HDAC2-217ENST00000524334 AFAP1Q8N556 730 aa20.22■□□□□ 0.83
HDAC2-217ENST00000524334 ZNF777Q9ULD5 760 aaPredicted RBP20.21■□□□□ 0.83
HDAC2-217ENST00000524334 ZNF518AQ6AHZ1 1483 aa20.2■□□□□ 0.82
HDAC2-217ENST00000524334 APLP2Q06481 763 aa20.2■□□□□ 0.82
HDAC2-217ENST00000524334 EHBP1L1Q8N3D4 1523 aa20.2■□□□□ 0.82
HDAC2-217ENST00000524334 ZMYM4Q5VZL5 1548 aa20.19■□□□□ 0.82
HDAC2-217ENST00000524334 ARID4BQ4LE39 1312 aaPredicted RBP20.19■□□□□ 0.82
HDAC2-217ENST00000524334 PREX2Q70Z35 1606 aa20.17■□□□□ 0.82
HDAC2-217ENST00000524334 RICTORQ6R327 1708 aa20.17■□□□□ 0.82
HDAC2-217ENST00000524334 MYT1LQ9UL68 1186 aa20.17■□□□□ 0.82
HDAC2-217ENST00000524334 MAP3K1Q13233 1512 aa20.17■□□□□ 0.82
HDAC2-217ENST00000524334 TIAM1Q13009 1591 aa20.16■□□□□ 0.82
HDAC2-217ENST00000524334 ZFYVE16Q7Z3T8 1539 aa20.14■□□□□ 0.81
HDAC2-217ENST00000524334 YEATS2Q9ULM3 1422 aa20.14■□□□□ 0.81
HDAC2-217ENST00000524334 KIAA1107Q9UPP5 1409 aa20.14■□□□□ 0.81
HDAC2-217ENST00000524334 CDC42BPBQ9Y5S2 1711 aa20.13■□□□□ 0.81
HDAC2-217ENST00000524334 LRRC9Q6ZRR7 1453 aa20.13■□□□□ 0.81
HDAC2-217ENST00000524334 PLEKHH2Q8IVE3 1493 aa20.13■□□□□ 0.81
HDAC2-217ENST00000524334 HNRNPMP52272 730 aaKnown RBP eCLIP20.13■□□□□ 0.81
HDAC2-217ENST00000524334 ARHGEF40Q8TER5 1519 aa20.12■□□□□ 0.81
HDAC2-217ENST00000524334 TRAPPC8Q9Y2L5 1435 aa20.12■□□□□ 0.81
HDAC2-217ENST00000524334 KANK4Q5T7N3 995 aaPredicted RBP20.12■□□□□ 0.81
HDAC2-217ENST00000524334 ABCC1P33527 1531 aa20.12■□□□□ 0.81
HDAC2-217ENST00000524334 ARHGEF12Q9NZN5 1544 aa20.12■□□□□ 0.81
HDAC2-217ENST00000524334 ATP10AO60312 1499 aa20.11■□□□□ 0.81
HDAC2-217ENST00000524334 NCOA2Q15596 1464 aa20.11■□□□□ 0.81
HDAC2-217ENST00000524334 MLH3Q9UHC1 1453 aa20.11■□□□□ 0.81
HDAC2-217ENST00000524334 CDC42BPAQ5VT25 1732 aa20.1■□□□□ 0.81
HDAC2-217ENST00000524334 KDM5CP41229 1560 aa20.08■□□□□ 0.81
HDAC2-217ENST00000524334 SPAG9O60271 1321 aaKnown RBP20.07■□□□□ 0.8
HDAC2-217ENST00000524334 ZNF644Q9H582 1327 aaPredicted RBP20.07■□□□□ 0.8
HDAC2-217ENST00000524334 RSPH4AQ5TD94 716 aa20.06■□□□□ 0.8
HDAC2-217ENST00000524334 C9orf84Q5VXU9 1444 aa20.06■□□□□ 0.8
HDAC2-217ENST00000524334 SAMD9LQ8IVG5 1584 aa20.06■□□□□ 0.8
HDAC2-217ENST00000524334 SUPT6HQ7KZ85 1726 aaKnown RBP20.05■□□□□ 0.8
HDAC2-217ENST00000524334 SYCP2Q9BX26 1530 aa20.03■□□□□ 0.8
HDAC2-217ENST00000524334 HECW2Q9P2P5 1572 aa20.02■□□□□ 0.8
HDAC2-217ENST00000524334 MLECQ14165 292 aa20.01■□□□□ 0.79
HDAC2-217ENST00000524334 ITSN2Q9NZM3 1697 aa20■□□□□ 0.79
HDAC2-217ENST00000524334 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
HDAC2-217ENST00000524334 ADAMTSL3P82987 1691 aa19.97■□□□□ 0.79
HDAC2-217ENST00000524334 MIA2Q96PC5 1412 aa19.97■□□□□ 0.79
HDAC2-217ENST00000524334 TSPY4P0CV99 314 aa19.97■□□□□ 0.79
HDAC2-217ENST00000524334 TSPY10P0CW01 314 aa19.97■□□□□ 0.79
HDAC2-217ENST00000524334 PTPRMP28827 1452 aa19.97■□□□□ 0.79
HDAC2-217ENST00000524334 BCORL1Q5H9F3 1711 aa19.96■□□□□ 0.79
HDAC2-217ENST00000524334 MYOM3Q5VTT5 1437 aa19.96■□□□□ 0.79
HDAC2-217ENST00000524334 REREQ9P2R6 1566 aa19.95■□□□□ 0.78
HDAC2-217ENST00000524334 DIP2CQ9Y2E4 1556 aa19.95■□□□□ 0.78
HDAC2-217ENST00000524334 RTEL1-TNFRSF6BF6WH68 1400 aa19.95■□□□□ 0.78
HDAC2-217ENST00000524334 CAMSAP2Q08AD1 1489 aa19.94■□□□□ 0.78
HDAC2-217ENST00000524334 AGLP35573 1532 aa19.92■□□□□ 0.78
HDAC2-217ENST00000524334 ESF1Q9H501 851 aaKnown RBP19.92■□□□□ 0.78
HDAC2-217ENST00000524334 CCDC141Q6ZP82 1450 aa19.92■□□□□ 0.78
HDAC2-217ENST00000524334 ATP7AQ04656 1500 aa19.92■□□□□ 0.78
HDAC2-217ENST00000524334 ABCA6Q8N139 1617 aa19.91■□□□□ 0.78
HDAC2-217ENST00000524334 KIDINS220Q9ULH0 1771 aa19.91■□□□□ 0.78
HDAC2-217ENST00000524334 A2MP01023 1474 aa19.89■□□□□ 0.77
HDAC2-217ENST00000524334 MADDQ8WXG6 1647 aa19.89■□□□□ 0.77
HDAC2-217ENST00000524334 SIGLEC1Q9BZZ2 1709 aa19.88■□□□□ 0.77
HDAC2-217ENST00000524334 INO80Q9ULG1 1556 aaPredicted RBP19.87■□□□□ 0.77
HDAC2-217ENST00000524334 DHX29Q7Z478 1369 aaKnown RBP19.86■□□□□ 0.77
HDAC2-217ENST00000524334 ARHGEF5Q12774 1597 aa19.86■□□□□ 0.77
HDAC2-217ENST00000524334 PPP6R1Q9UPN7 881 aa19.85■□□□□ 0.77
HDAC2-217ENST00000524334 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.77
HDAC2-217ENST00000524334 FGD6Q6ZV73 1430 aa19.83■□□□□ 0.76
HDAC2-217ENST00000524334 GGT6Q6P531 493 aa19.82■□□□□ 0.76
HDAC2-217ENST00000524334 CNTLNQ9NXG0 1405 aa19.81■□□□□ 0.76
HDAC2-217ENST00000524334 CEBPAP49715 358 aaPredicted RBP19.8■□□□□ 0.76
HDAC2-217ENST00000524334 RIMS1Q86UR5 1692 aaKnown RBP19.8■□□□□ 0.76
HDAC2-217ENST00000524334 PLXNC1O60486 1568 aa19.78■□□□□ 0.76
HDAC2-217ENST00000524334 KIF3BO15066 747 aa19.78■□□□□ 0.76
HDAC2-217ENST00000524334 TCOF1Q13428 1488 aaKnown RBP19.77■□□□□ 0.76
HDAC2-217ENST00000524334 ABCC5O15440 1437 aa19.76■□□□□ 0.75
HDAC2-217ENST00000524334 ADGBQ8N7X0 1667 aa19.75■□□□□ 0.75
HDAC2-217ENST00000524334 FAM50AQ14320 339 aaKnown RBP19.75■□□□□ 0.75
HDAC2-217ENST00000524334 PTPN23Q9H3S7 1636 aa19.75■□□□□ 0.75
HDAC2-217ENST00000524334 FER1L4A9Z1Z3 1794 aa19.75■□□□□ 0.75
HDAC2-217ENST00000524334 MAST1Q9Y2H9 1570 aa19.74■□□□□ 0.75
HDAC2-217ENST00000524334 ZMYM3Q14202 1370 aa19.73■□□□□ 0.75
HDAC2-217ENST00000524334 DAPK1P53355 1430 aa19.72■□□□□ 0.75
HDAC2-217ENST00000524334 SHANK2Q9UPX8 1470 aa19.72■□□□□ 0.75
HDAC2-217ENST00000524334 PPARGC1BQ86YN6 1023 aaKnown RBP19.71■□□□□ 0.75
HDAC2-217ENST00000524334 RRP7BPQ9NSQ0 103 aa19.71■□□□□ 0.75
HDAC2-217ENST00000524334 WASHC2CQ9Y4E1 1318 aa19.7■□□□□ 0.74
HDAC2-217ENST00000524334 LMTK3Q96Q04 1460 aa19.69■□□□□ 0.74
HDAC2-217ENST00000524334 ANKRD30AQ9BXX3 1397 aa19.69■□□□□ 0.74
HDAC2-217ENST00000524334 CHIC2Q9UKJ5 165 aa19.68■□□□□ 0.74
HDAC2-217ENST00000524334 KIF15Q9NS87 1388 aa19.68■□□□□ 0.74
HDAC2-217ENST00000524334 NPATQ14207 1427 aa19.67■□□□□ 0.74
HDAC2-217ENST00000524334 DUOX2Q9NRD8 1548 aa19.66■□□□□ 0.74
HDAC2-217ENST00000524334 UHRF1BP1Q6BDS2 1440 aa19.65■□□□□ 0.74
HDAC2-217ENST00000524334 DNMT1P26358 1616 aaKnown RBP19.65■□□□□ 0.74
HDAC2-217ENST00000524334 HSPA2P54652 639 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms