RNA–Protein interactions for RNA: ENST00000524291.1

VDAC3-212, Transcript of voltage dependent anion channel 3, humanhuman

TSL 2

Gene VDAC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-212ENST00000524291 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
VDAC3-212ENST00000524291 RNF166Q96A37 237 aaPredicted RBP12.84□□□□□ -0.35
VDAC3-212ENST00000524291 GPR153Q6NV75 609 aa12.82□□□□□ -0.36
VDAC3-212ENST00000524291 ZNF687Q8N1G0 1237 aa12.82□□□□□ -0.36
VDAC3-212ENST00000524291 NLRP6P59044 892 aa12.79□□□□□ -0.36
VDAC3-212ENST00000524291 MYT1LQ9UL68 1186 aa12.79□□□□□ -0.36
VDAC3-212ENST00000524291 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
VDAC3-212ENST00000524291 ARSIQ5FYB1 569 aa12.77□□□□□ -0.37
VDAC3-212ENST00000524291 BCL11BQ9C0K0 894 aaPredicted RBP12.75□□□□□ -0.37
VDAC3-212ENST00000524291 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
VDAC3-212ENST00000524291 FBXO22Q8NEZ5 403 aa12.71□□□□□ -0.37
VDAC3-212ENST00000524291 PTGER2P43116 358 aa12.7□□□□□ -0.38
VDAC3-212ENST00000524291 ZNF316A6NFI3 1004 aaPredicted RBP12.69□□□□□ -0.38
VDAC3-212ENST00000524291 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.387e-11■■□□□ 13.4
VDAC3-212ENST00000524291 ANKRD13DQ6ZTN6 518 aa12.68□□□□□ -0.38
VDAC3-212ENST00000524291 STK25O00506 426 aa12.65□□□□□ -0.38
VDAC3-212ENST00000524291 MFRPQ9BY79 579 aa12.65□□□□□ -0.38
VDAC3-212ENST00000524291 C2orf72A6NCS6 295 aa12.61□□□□□ -0.39
VDAC3-212ENST00000524291 LSM11P83369 360 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■■□□□ 14
VDAC3-212ENST00000524291 KIF3CO14782 793 aa12.59□□□□□ -0.39
VDAC3-212ENST00000524291 NUDT7P0C024 238 aa12.59□□□□□ -0.39
VDAC3-212ENST00000524291 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
VDAC3-212ENST00000524291 PBX2P40425 430 aa12.55□□□□□ -0.4
VDAC3-212ENST00000524291 TMC2Q8TDI7 906 aa12.55□□□□□ -0.4
VDAC3-212ENST00000524291 LHX6Q9UPM6 363 aa12.53□□□□□ -0.4
VDAC3-212ENST00000524291 PCDHGA4Q9Y5G9 962 aa12.53□□□□□ -0.4
VDAC3-212ENST00000524291 SLC34A2O95436 690 aa12.51□□□□□ -0.41
VDAC3-212ENST00000524291 AXIN2Q9Y2T1 843 aa12.49□□□□□ -0.41
VDAC3-212ENST00000524291 RGL2O15211 777 aa12.46□□□□□ -0.41
VDAC3-212ENST00000524291 POTEEQ6S8J3 1075 aa12.45□□□□□ -0.42
VDAC3-212ENST00000524291 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
VDAC3-212ENST00000524291 PKD2Q13563 968 aa12.41□□□□□ -0.42
VDAC3-212ENST00000524291 PPP1R37O75864 691 aa12.4□□□□□ -0.42
VDAC3-212ENST00000524291 ARHGAP33O14559 1287 aa12.39□□□□□ -0.43
VDAC3-212ENST00000524291 ADGRD1Q6QNK2 874 aa12.38□□□□□ -0.43
VDAC3-212ENST00000524291 HCSTQ9UBK5 93 aa12.38□□□□□ -0.43
VDAC3-212ENST00000524291 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
VDAC3-212ENST00000524291 PTCD2Q8WV60 388 aaKnown RBP12.34□□□□□ -0.43
VDAC3-212ENST00000524291 PLPP6Q8IY26 295 aa12.31□□□□□ -0.44
VDAC3-212ENST00000524291 KDM4FA0A1W2PPD8 638 aa12.3□□□□□ -0.44
VDAC3-212ENST00000524291 TK2O00142 265 aa12.3□□□□□ -0.44
VDAC3-212ENST00000524291 FOXK1P85037 733 aa12.3□□□□□ -0.44
VDAC3-212ENST00000524291 PSEN2P49810 448 aa12.29□□□□□ -0.44
VDAC3-212ENST00000524291 PPP4R3BQ5MIZ7 849 aa12.29□□□□□ -0.44
VDAC3-212ENST00000524291 TBC1D12O60347 775 aa12.28□□□□□ -0.44
VDAC3-212ENST00000524291 DMRTA1Q5VZB9 504 aa12.28□□□□□ -0.44
VDAC3-212ENST00000524291 STAC3Q96MF2 364 aa12.27□□□□□ -0.45
VDAC3-212ENST00000524291 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
VDAC3-212ENST00000524291 HRO43593 1189 aa12.24□□□□□ -0.45
VDAC3-212ENST00000524291 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
VDAC3-212ENST00000524291 DSG2Q14126 1118 aa12.23□□□□□ -0.45
VDAC3-212ENST00000524291 KCTD12Q96CX2 325 aaKnown RBP12.22□□□□□ -0.45
VDAC3-212ENST00000524291 HS6ST3Q8IZP7 471 aa12.21□□□□□ -0.45
VDAC3-212ENST00000524291 KCNK17Q96T54 332 aa12.2□□□□□ -0.46
VDAC3-212ENST00000524291 CHGAP10645 457 aaKnown RBP12.13□□□□□ -0.47
VDAC3-212ENST00000524291 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.47
VDAC3-212ENST00000524291 VPS9D1Q9Y2B5 631 aa12.12□□□□□ -0.47
VDAC3-212ENST00000524291 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
VDAC3-212ENST00000524291 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
VDAC3-212ENST00000524291 PTPN5P54829 565 aa12.09□□□□□ -0.47
VDAC3-212ENST00000524291 RYDENQ9NUL5 291 aaKnown RBP12.08□□□□□ -0.48
VDAC3-212ENST00000524291 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
VDAC3-212ENST00000524291 PPP1R15BQ5SWA1 713 aa12.05□□□□□ -0.48
VDAC3-212ENST00000524291 SLC4A5Q9BY07 1137 aa12.04□□□□□ -0.48
VDAC3-212ENST00000524291 CRISPLD2Q9H0B8 497 aa12.04□□□□□ -0.48
VDAC3-212ENST00000524291 PTPREP23469 700 aa12.03□□□□□ -0.48
VDAC3-212ENST00000524291 GOLGA8CPA6NN73 597 aa12.02□□□□□ -0.49
VDAC3-212ENST00000524291 FOSBP53539 338 aa12.02□□□□□ -0.49
VDAC3-212ENST00000524291 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
VDAC3-212ENST00000524291 DNAJC5Q9H3Z4 198 aa12□□□□□ -0.49
VDAC3-212ENST00000524291 PDE4AP27815 886 aa11.99□□□□□ -0.49
VDAC3-212ENST00000524291 THSD4Q6ZMP0 1018 aa11.99□□□□□ -0.49
VDAC3-212ENST00000524291 MRPL50Q8N5N7 158 aaKnown RBP11.98□□□□□ -0.49
VDAC3-212ENST00000524291 BHMG1C9JSJ3 638 aaPredicted RBP11.97□□□□□ -0.49
VDAC3-212ENST00000524291 WNT2BQ93097 391 aa11.97□□□□□ -0.49
VDAC3-212ENST00000524291 JPH4Q96JJ6 628 aa11.97□□□□□ -0.49
VDAC3-212ENST00000524291 ZBED2Q9BTP6 218 aa11.97□□□□□ -0.49
VDAC3-212ENST00000524291 EVI5O60447 810 aa11.95□□□□□ -0.5
VDAC3-212ENST00000524291 ZDHHC16Q969W1 377 aa11.95□□□□□ -0.5
VDAC3-212ENST00000524291 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
VDAC3-212ENST00000524291 NCKAP5LQ9HCH0 1330 aa11.94□□□□□ -0.5
VDAC3-212ENST00000524291 RGS20O76081 388 aa11.94□□□□□ -0.5
VDAC3-212ENST00000524291 IFFO2Q5TF58 517 aa11.94□□□□□ -0.5
VDAC3-212ENST00000524291 NBPF3Q9H094 633 aa11.94□□□□□ -0.5
VDAC3-212ENST00000524291 ADAM33Q9BZ11 813 aa11.92□□□□□ -0.5
VDAC3-212ENST00000524291 MAP3K9P80192 1104 aa11.9□□□□□ -0.5
VDAC3-212ENST00000524291 LARP6Q9BRS8 491 aaKnown RBP11.9□□□□□ -0.5
VDAC3-212ENST00000524291 DDX27Q96GQ7 796 aaKnown RBP11.89□□□□□ -0.51
VDAC3-212ENST00000524291 A0A0G2JS52 829 aa11.88□□□□□ -0.51
VDAC3-212ENST00000524291 IRX2Q9BZI1 471 aaPredicted RBP11.87□□□□□ -0.51
VDAC3-212ENST00000524291 PPP1R3GB7ZBB8 358 aa11.84□□□□□ -0.51
VDAC3-212ENST00000524291 GTPBP6O43824 516 aaPredicted RBP11.82□□□□□ -0.52
VDAC3-212ENST00000524291 ANKK1Q8NFD2 765 aa11.82□□□□□ -0.52
VDAC3-212ENST00000524291 RABGEF1Q9UJ41 708 aa11.82□□□□□ -0.52
VDAC3-212ENST00000524291 MFSD10Q14728 455 aa11.8□□□□□ -0.52
VDAC3-212ENST00000524291 PROX2Q3B8N5 592 aa11.8□□□□□ -0.52
VDAC3-212ENST00000524291 PCDHGA10Q9Y5H3 936 aa11.8□□□□□ -0.52
VDAC3-212ENST00000524291 EMILIN3Q9NT22 766 aa11.78□□□□□ -0.52
VDAC3-212ENST00000524291 COL9A1P20849 921 aa11.77□□□□□ -0.53
VDAC3-212ENST00000524291 TYW1BQ6NUM6 668 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms