RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 KIF14Q15058 1648 aa19.29■□□□□ 0.68
SPARC-206ENST00000524277 CASKIN1Q8WXD9 1431 aa19.29■□□□□ 0.68
SPARC-206ENST00000524277 ILDR1Q86SU0 546 aaPredicted RBP19.29■□□□□ 0.68
SPARC-206ENST00000524277 CCDC18Q5T9S5 1454 aa19.28■□□□□ 0.68
SPARC-206ENST00000524277 MYO5CQ9NQX4 1742 aa19.28■□□□□ 0.68
SPARC-206ENST00000524277 YEATS2Q9ULM3 1422 aa19.27■□□□□ 0.68
SPARC-206ENST00000524277 MADDQ8WXG6 1647 aa19.27■□□□□ 0.68
SPARC-206ENST00000524277 ATP10AO60312 1499 aa19.26■□□□□ 0.67
SPARC-206ENST00000524277 ZNF518AQ6AHZ1 1483 aa19.25■□□□□ 0.67
SPARC-206ENST00000524277 ARHGAP5Q13017 1502 aa19.24■□□□□ 0.67
SPARC-206ENST00000524277 C9orf84Q5VXU9 1444 aa19.22■□□□□ 0.67
SPARC-206ENST00000524277 PCF11O94913 1555 aaKnown RBP19.2■□□□□ 0.66
SPARC-206ENST00000524277 AFAP1Q8N556 730 aa19.19■□□□□ 0.66
SPARC-206ENST00000524277 FYCO1Q9BQS8 1478 aa19.19■□□□□ 0.66
SPARC-206ENST00000524277 RIMS1Q86UR5 1692 aaKnown RBP19.19■□□□□ 0.66
SPARC-206ENST00000524277 MLECQ14165 292 aa19.18■□□□□ 0.66
SPARC-206ENST00000524277 LMTK3Q96Q04 1460 aa19.17■□□□□ 0.66
SPARC-206ENST00000524277 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
SPARC-206ENST00000524277 KDM5CP41229 1560 aa19.17■□□□□ 0.66
SPARC-206ENST00000524277 LRRIQ1Q96JM4 1722 aa19.17■□□□□ 0.66
SPARC-206ENST00000524277 MLH3Q9UHC1 1453 aa19.15■□□□□ 0.66
SPARC-206ENST00000524277 ARHGEF12Q9NZN5 1544 aa19.14■□□□□ 0.65
SPARC-206ENST00000524277 SIGLEC1Q9BZZ2 1709 aa19.12■□□□□ 0.65
SPARC-206ENST00000524277 CDC42BPBQ9Y5S2 1711 aa19.12■□□□□ 0.65
SPARC-206ENST00000524277 PREX2Q70Z35 1606 aa19.12■□□□□ 0.65
SPARC-206ENST00000524277 REREQ9P2R6 1566 aa19.11■□□□□ 0.65
SPARC-206ENST00000524277 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
SPARC-206ENST00000524277 FER1L4A9Z1Z3 1794 aa19.11■□□□□ 0.65
SPARC-206ENST00000524277 FBXO41Q8TF61 875 aa19.1■□□□□ 0.65
SPARC-206ENST00000524277 ABCC1P33527 1531 aa19.1■□□□□ 0.65
SPARC-206ENST00000524277 TRAPPC8Q9Y2L5 1435 aa19.08■□□□□ 0.65
SPARC-206ENST00000524277 ESF1Q9H501 851 aaKnown RBP19.07■□□□□ 0.64
SPARC-206ENST00000524277 DIP2CQ9Y2E4 1556 aa19.06■□□□□ 0.64
SPARC-206ENST00000524277 AGLP35573 1532 aa19.06■□□□□ 0.64
SPARC-206ENST00000524277 HSPA2P54652 639 aa19.06■□□□□ 0.64
SPARC-206ENST00000524277 GPATCH8Q9UKJ3 1502 aaKnown RBP19.05■□□□□ 0.64
SPARC-206ENST00000524277 CFDP1Q9UEE9 299 aaPredicted RBP19.04■□□□□ 0.64
SPARC-206ENST00000524277 ZNF777Q9ULD5 760 aaPredicted RBP19.04■□□□□ 0.64
SPARC-206ENST00000524277 KIAA1107Q9UPP5 1409 aa19.04■□□□□ 0.64
SPARC-206ENST00000524277 ITSN2Q9NZM3 1697 aa19.04■□□□□ 0.64
SPARC-206ENST00000524277 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
SPARC-206ENST00000524277 PLEKHH2Q8IVE3 1493 aa19.03■□□□□ 0.64
SPARC-206ENST00000524277 CDC42BPAQ5VT25 1732 aa19.03■□□□□ 0.64
SPARC-206ENST00000524277 CCNB3Q8WWL7 1395 aa19.03■□□□□ 0.64
SPARC-206ENST00000524277 SETD1BQ9UPS6 1966 aaKnown RBP19.02■□□□□ 0.64
SPARC-206ENST00000524277 CEBPAP49715 358 aaPredicted RBP19.02■□□□□ 0.64
SPARC-206ENST00000524277 SPAG9O60271 1321 aaKnown RBP19.01■□□□□ 0.63
SPARC-206ENST00000524277 ABCA6Q8N139 1617 aa19.01■□□□□ 0.63
SPARC-206ENST00000524277 DMRT2Q9Y5R5 561 aa19.01■□□□□ 0.63
SPARC-206ENST00000524277 CNTLNQ9NXG0 1405 aa19■□□□□ 0.63
SPARC-206ENST00000524277 HNRNPMP52272 730 aaKnown RBP eCLIP18.99■□□□□ 0.63
SPARC-206ENST00000524277 UHRF1BP1Q6BDS2 1440 aa18.99■□□□□ 0.63
SPARC-206ENST00000524277 PREX1Q8TCU6 1659 aa18.98■□□□□ 0.63
SPARC-206ENST00000524277 KIDINS220Q9ULH0 1771 aa18.98■□□□□ 0.63
SPARC-206ENST00000524277 SAMD9LQ8IVG5 1584 aa18.98■□□□□ 0.63
SPARC-206ENST00000524277 SYCP2Q9BX26 1530 aa18.95■□□□□ 0.62
SPARC-206ENST00000524277 CEP162Q5TB80 1403 aa18.94■□□□□ 0.62
SPARC-206ENST00000524277 PPP6R1Q9UPN7 881 aa18.93■□□□□ 0.62
SPARC-206ENST00000524277 EHBP1L1Q8N3D4 1523 aa18.92■□□□□ 0.62
SPARC-206ENST00000524277 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
SPARC-206ENST00000524277 RSPH4AQ5TD94 716 aa18.9■□□□□ 0.62
SPARC-206ENST00000524277 CERKQ8TCT0 537 aa18.9■□□□□ 0.62
SPARC-206ENST00000524277 NPATQ14207 1427 aa18.89■□□□□ 0.61
SPARC-206ENST00000524277 A2MP01023 1474 aa18.89■□□□□ 0.61
SPARC-206ENST00000524277 C3P01024 1663 aa18.89■□□□□ 0.61
SPARC-206ENST00000524277 RTEL1-TNFRSF6BF6WH68 1400 aa18.88■□□□□ 0.61
SPARC-206ENST00000524277 ZMYM3Q14202 1370 aa18.87■□□□□ 0.61
SPARC-206ENST00000524277 INO80Q9ULG1 1556 aaPredicted RBP18.86■□□□□ 0.61
SPARC-206ENST00000524277 TIAM1Q13009 1591 aa18.85■□□□□ 0.61
SPARC-206ENST00000524277 MBD5Q9P267 1494 aa18.85■□□□□ 0.61
SPARC-206ENST00000524277 MROH2AA6NES4 1674 aa18.85■□□□□ 0.61
SPARC-206ENST00000524277 PTPRTO14522 1441 aa18.84■□□□□ 0.61
SPARC-206ENST00000524277 ZNF644Q9H582 1327 aaPredicted RBP18.84■□□□□ 0.61
SPARC-206ENST00000524277 PLXNC1O60486 1568 aa18.84■□□□□ 0.61
SPARC-206ENST00000524277 GGT6Q6P531 493 aa18.83■□□□□ 0.6
SPARC-206ENST00000524277 SUPT6HQ7KZ85 1726 aaKnown RBP18.82■□□□□ 0.6
SPARC-206ENST00000524277 STRCQ7RTU9 1775 aa18.81■□□□□ 0.6
SPARC-206ENST00000524277 DHX29Q7Z478 1369 aaKnown RBP18.81■□□□□ 0.6
SPARC-206ENST00000524277 ADGBQ8N7X0 1667 aa18.8■□□□□ 0.6
SPARC-206ENST00000524277 NCOA2Q15596 1464 aa18.8■□□□□ 0.6
SPARC-206ENST00000524277 VPS8Q8N3P4 1428 aa18.78■□□□□ 0.6
SPARC-206ENST00000524277 CCDC141Q6ZP82 1450 aa18.77■□□□□ 0.6
SPARC-206ENST00000524277 NCOA1Q15788 1441 aa18.77■□□□□ 0.6
SPARC-206ENST00000524277 TSPY4P0CV99 314 aa18.77■□□□□ 0.6
SPARC-206ENST00000524277 TSPY10P0CW01 314 aa18.77■□□□□ 0.6
SPARC-206ENST00000524277 PTPRKQ15262 1439 aa18.74■□□□□ 0.59
SPARC-206ENST00000524277 CAMSAP2Q08AD1 1489 aa18.74■□□□□ 0.59
SPARC-206ENST00000524277 LOC105371045A0A1W2PR82 267 aa18.74■□□□□ 0.59
SPARC-206ENST00000524277 PKD2Q13563 968 aa18.74■□□□□ 0.59
SPARC-206ENST00000524277 CLTCQ00610 1675 aaKnown RBP18.73■□□□□ 0.59
SPARC-206ENST00000524277 MAP3K1Q13233 1512 aa18.73■□□□□ 0.59
SPARC-206ENST00000524277 FAM135AQ9P2D6 1515 aa18.73■□□□□ 0.59
SPARC-206ENST00000524277 LRRC9Q6ZRR7 1453 aa18.72■□□□□ 0.59
SPARC-206ENST00000524277 KIF3BO15066 747 aa18.72■□□□□ 0.59
SPARC-206ENST00000524277 PLA2R1Q13018 1463 aa18.71■□□□□ 0.59
SPARC-206ENST00000524277 CAMSAP1Q5T5Y3 1602 aa18.71■□□□□ 0.58
SPARC-206ENST00000524277 ARHGEF5Q12774 1597 aa18.7■□□□□ 0.58
SPARC-206ENST00000524277 IQSEC2Q5JU85 1478 aa18.68■□□□□ 0.58
SPARC-206ENST00000524277 WASHC2CQ9Y4E1 1318 aa18.68■□□□□ 0.58
SPARC-206ENST00000524277 MIA2Q96PC5 1412 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms