RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 ARHGAP5Q13017 1502 aa26.29■■□□□ 1.8
CSGALNACT1-216ENST00000524213 ADGRL1O94910 1474 aa26.28■■□□□ 1.8
CSGALNACT1-216ENST00000524213 EFCAB2Q5VUJ9 269 aa26.26■■□□□ 1.79
CSGALNACT1-216ENST00000524213 SCAPERQ9BY12 1400 aa26.23■■□□□ 1.79
CSGALNACT1-216ENST00000524213 ZMYM4Q5VZL5 1548 aa26.22■■□□□ 1.79
CSGALNACT1-216ENST00000524213 ARHGEF40Q8TER5 1519 aa26.2■■□□□ 1.79
CSGALNACT1-216ENST00000524213 POGZQ7Z3K3 1410 aa26.2■■□□□ 1.78
CSGALNACT1-216ENST00000524213 MTUS2Q5JR59 1369 aa26.2■■□□□ 1.78
CSGALNACT1-216ENST00000524213 EHBP1L1Q8N3D4 1523 aa26.18■■□□□ 1.78
CSGALNACT1-216ENST00000524213 TIAM1Q13009 1591 aa26.15■■□□□ 1.78
CSGALNACT1-216ENST00000524213 ZFYVE16Q7Z3T8 1539 aa26.14■■□□□ 1.78
CSGALNACT1-216ENST00000524213 ITSN2Q9NZM3 1697 aa26.14■■□□□ 1.78
CSGALNACT1-216ENST00000524213 ABCC1P33527 1531 aa26.14■■□□□ 1.77
CSGALNACT1-216ENST00000524213 GPATCH8Q9UKJ3 1502 aaKnown RBP26.14■■□□□ 1.77
CSGALNACT1-216ENST00000524213 APLP2Q06481 763 aa26.12■■□□□ 1.77
CSGALNACT1-216ENST00000524213 YEATS2Q9ULM3 1422 aa26.12■■□□□ 1.77
CSGALNACT1-216ENST00000524213 MAGI2Q86UL8 1455 aa26.11■■□□□ 1.77
CSGALNACT1-216ENST00000524213 MAP3K1Q13233 1512 aa26.11■■□□□ 1.77
CSGALNACT1-216ENST00000524213 SAMD9LQ8IVG5 1584 aa26.1■■□□□ 1.77
CSGALNACT1-216ENST00000524213 ZNF518AQ6AHZ1 1483 aa26.1■■□□□ 1.77
CSGALNACT1-216ENST00000524213 ARHGEF12Q9NZN5 1544 aa26.09■■□□□ 1.77
CSGALNACT1-216ENST00000524213 SIGLEC1Q9BZZ2 1709 aa26.09■■□□□ 1.77
CSGALNACT1-216ENST00000524213 KDM5CP41229 1560 aa26.09■■□□□ 1.77
CSGALNACT1-216ENST00000524213 SUPT6HQ7KZ85 1726 aaKnown RBP26.08■■□□□ 1.76
CSGALNACT1-216ENST00000524213 CCNB3Q8WWL7 1395 aa26.07■■□□□ 1.76
CSGALNACT1-216ENST00000524213 BCORL1Q5H9F3 1711 aa26.07■■□□□ 1.76
CSGALNACT1-216ENST00000524213 ADAMTSL3P82987 1691 aa26.06■■□□□ 1.76
CSGALNACT1-216ENST00000524213 AFAP1Q8N556 730 aa26.05■■□□□ 1.76
CSGALNACT1-216ENST00000524213 HECW2Q9P2P5 1572 aa26.04■■□□□ 1.76
CSGALNACT1-216ENST00000524213 ZNF777Q9ULD5 760 aaPredicted RBP26.04■■□□□ 1.76
CSGALNACT1-216ENST00000524213 TRAPPC8Q9Y2L5 1435 aa26.04■■□□□ 1.76
CSGALNACT1-216ENST00000524213 ARID4BQ4LE39 1312 aaPredicted RBP26.02■■□□□ 1.76
CSGALNACT1-216ENST00000524213 SYCP2Q9BX26 1530 aa26.02■■□□□ 1.76
CSGALNACT1-216ENST00000524213 NCOA2Q15596 1464 aa26.01■■□□□ 1.75
CSGALNACT1-216ENST00000524213 LRRC9Q6ZRR7 1453 aa26.01■■□□□ 1.75
CSGALNACT1-216ENST00000524213 CFDP1Q9UEE9 299 aaPredicted RBP26.01■■□□□ 1.75
CSGALNACT1-216ENST00000524213 ATP10AO60312 1499 aa25.98■■□□□ 1.75
CSGALNACT1-216ENST00000524213 ABCA6Q8N139 1617 aa25.98■■□□□ 1.75
CSGALNACT1-216ENST00000524213 DIP2CQ9Y2E4 1556 aa25.98■■□□□ 1.75
CSGALNACT1-216ENST00000524213 MADDQ8WXG6 1647 aa25.97■■□□□ 1.75
CSGALNACT1-216ENST00000524213 KIDINS220Q9ULH0 1771 aa25.97■■□□□ 1.75
CSGALNACT1-216ENST00000524213 MLH3Q9UHC1 1453 aa25.97■■□□□ 1.75
CSGALNACT1-216ENST00000524213 C9orf84Q5VXU9 1444 aa25.96■■□□□ 1.75
CSGALNACT1-216ENST00000524213 MYT1LQ9UL68 1186 aa25.95■■□□□ 1.74
CSGALNACT1-216ENST00000524213 PLEKHH2Q8IVE3 1493 aa25.95■■□□□ 1.74
CSGALNACT1-216ENST00000524213 HNRNPMP52272 730 aaKnown RBP eCLIP25.94■■□□□ 1.74
CSGALNACT1-216ENST00000524213 KANK4Q5T7N3 995 aaPredicted RBP25.94■■□□□ 1.74
CSGALNACT1-216ENST00000524213 KIAA1107Q9UPP5 1409 aa25.93■■□□□ 1.74
CSGALNACT1-216ENST00000524213 RIMS1Q86UR5 1692 aaKnown RBP25.91■■□□□ 1.74
CSGALNACT1-216ENST00000524213 ZNF644Q9H582 1327 aaPredicted RBP25.9■■□□□ 1.74
CSGALNACT1-216ENST00000524213 REREQ9P2R6 1566 aa25.89■■□□□ 1.73
CSGALNACT1-216ENST00000524213 PTPRMP28827 1452 aa25.88■■□□□ 1.73
CSGALNACT1-216ENST00000524213 FER1L4A9Z1Z3 1794 aa25.87■■□□□ 1.73
CSGALNACT1-216ENST00000524213 INO80Q9ULG1 1556 aaPredicted RBP25.86■■□□□ 1.73
CSGALNACT1-216ENST00000524213 MLECQ14165 292 aa25.85■■□□□ 1.73
CSGALNACT1-216ENST00000524213 CAMSAP2Q08AD1 1489 aa25.85■■□□□ 1.73
CSGALNACT1-216ENST00000524213 MBD5Q9P267 1494 aa25.85■■□□□ 1.73
CSGALNACT1-216ENST00000524213 ATP7AQ04656 1500 aa25.84■■□□□ 1.73
CSGALNACT1-216ENST00000524213 SPAG9O60271 1321 aaKnown RBP25.84■■□□□ 1.73
CSGALNACT1-216ENST00000524213 AGLP35573 1532 aa25.78■■□□□ 1.72
CSGALNACT1-216ENST00000524213 MYOM3Q5VTT5 1437 aa25.76■■□□□ 1.71
CSGALNACT1-216ENST00000524213 MIA2Q96PC5 1412 aa25.76■■□□□ 1.71
CSGALNACT1-216ENST00000524213 ADGBQ8N7X0 1667 aa25.76■■□□□ 1.71
CSGALNACT1-216ENST00000524213 CCDC141Q6ZP82 1450 aa25.75■■□□□ 1.71
CSGALNACT1-216ENST00000524213 ARHGEF5Q12774 1597 aa25.74■■□□□ 1.71
CSGALNACT1-216ENST00000524213 RSPH4AQ5TD94 716 aa25.72■■□□□ 1.71
CSGALNACT1-216ENST00000524213 PLXNC1O60486 1568 aa25.72■■□□□ 1.71
CSGALNACT1-216ENST00000524213 A2MP01023 1474 aa25.7■■□□□ 1.7
CSGALNACT1-216ENST00000524213 RTEL1-TNFRSF6BF6WH68 1400 aa25.7■■□□□ 1.7
CSGALNACT1-216ENST00000524213 PLPPR3Q6T4P5 718 aa25.68■■□□□ 1.7
CSGALNACT1-216ENST00000524213 PTPN23Q9H3S7 1636 aa25.66■■□□□ 1.7
CSGALNACT1-216ENST00000524213 C3P01024 1663 aa25.62■■□□□ 1.69
CSGALNACT1-216ENST00000524213 MAST1Q9Y2H9 1570 aa25.62■■□□□ 1.69
CSGALNACT1-216ENST00000524213 FGD6Q6ZV73 1430 aa25.62■■□□□ 1.69
CSGALNACT1-216ENST00000524213 CROCC2H7BZ55 1655 aa25.59■■□□□ 1.69
CSGALNACT1-216ENST00000524213 TSPY4P0CV99 314 aa25.58■■□□□ 1.69
CSGALNACT1-216ENST00000524213 TSPY10P0CW01 314 aa25.58■■□□□ 1.69
CSGALNACT1-216ENST00000524213 CEBPAP49715 358 aaPredicted RBP25.58■■□□□ 1.69
CSGALNACT1-216ENST00000524213 LMTK3Q96Q04 1460 aa25.58■■□□□ 1.69
CSGALNACT1-216ENST00000524213 DHX29Q7Z478 1369 aaKnown RBP25.57■■□□□ 1.68
CSGALNACT1-216ENST00000524213 MROH2AA6NES4 1674 aa25.57■■□□□ 1.68
CSGALNACT1-216ENST00000524213 CLTCQ00610 1675 aaKnown RBP25.57■■□□□ 1.68
CSGALNACT1-216ENST00000524213 TCOF1Q13428 1488 aaKnown RBP25.56■■□□□ 1.68
CSGALNACT1-216ENST00000524213 ESF1Q9H501 851 aaKnown RBP25.56■■□□□ 1.68
CSGALNACT1-216ENST00000524213 PREX1Q8TCU6 1659 aa25.55■■□□□ 1.68
CSGALNACT1-216ENST00000524213 CNTLNQ9NXG0 1405 aa25.54■■□□□ 1.68
CSGALNACT1-216ENST00000524213 DNMT1P26358 1616 aaKnown RBP25.53■■□□□ 1.68
CSGALNACT1-216ENST00000524213 PPARGC1BQ86YN6 1023 aaKnown RBP25.53■■□□□ 1.68
CSGALNACT1-216ENST00000524213 GGT6Q6P531 493 aa25.52■■□□□ 1.68
CSGALNACT1-216ENST00000524213 ABCC5O15440 1437 aa25.51■■□□□ 1.67
CSGALNACT1-216ENST00000524213 SETD1BQ9UPS6 1966 aaKnown RBP25.5■■□□□ 1.67
CSGALNACT1-216ENST00000524213 SHANK2Q9UPX8 1470 aa25.48■■□□□ 1.67
CSGALNACT1-216ENST00000524213 DAPK1P53355 1430 aa25.48■■□□□ 1.67
CSGALNACT1-216ENST00000524213 KIF3BO15066 747 aa25.47■■□□□ 1.67
CSGALNACT1-216ENST00000524213 FAM50AQ14320 339 aaKnown RBP25.46■■□□□ 1.67
CSGALNACT1-216ENST00000524213 EIF2AK4Q9P2K8 1649 aaKnown RBP25.44■■□□□ 1.66
CSGALNACT1-216ENST00000524213 ZMYM3Q14202 1370 aa25.44■■□□□ 1.66
CSGALNACT1-216ENST00000524213 RNF17Q9BXT8 1623 aaKnown RBP25.43■■□□□ 1.66
CSGALNACT1-216ENST00000524213 HSPA2P54652 639 aa25.42■■□□□ 1.66
CSGALNACT1-216ENST00000524213 PPP6R1Q9UPN7 881 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms