RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
NPM1-212ENST00000524204 SOX12O15370 315 aa14.32□□□□□ -0.12
NPM1-212ENST00000524204 PTGER2P43116 358 aa14.29□□□□□ -0.12
NPM1-212ENST00000524204 RNF25Q96BH1 459 aaPredicted RBP14.29□□□□□ -0.12
NPM1-212ENST00000524204 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
NPM1-212ENST00000524204 TRIM41Q8WV44 630 aa14.28□□□□□ -0.12
NPM1-212ENST00000524204 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.27□□□□□ -0.13
NPM1-212ENST00000524204 ZFP91Q96JP5 570 aaPredicted RBP14.27□□□□□ -0.13
NPM1-212ENST00000524204 LSM11P83369 360 aaKnown RBP eCLIP14.24□□□□□ -0.13
NPM1-212ENST00000524204 RIOK3O14730 519 aaKnown RBP14.22□□□□□ -0.13
NPM1-212ENST00000524204 POTEEQ6S8J3 1075 aa14.19□□□□□ -0.14
NPM1-212ENST00000524204 VGFO15240 615 aaPredicted RBP14.15□□□□□ -0.14
NPM1-212ENST00000524204 FBXO22Q8NEZ5 403 aa14.14□□□□□ -0.15
NPM1-212ENST00000524204 AXIN2Q9Y2T1 843 aa14.14□□□□□ -0.15
NPM1-212ENST00000524204 NUDT7P0C024 238 aa14.13□□□□□ -0.15
NPM1-212ENST00000524204 KIF3CO14782 793 aa14.11□□□□□ -0.15
NPM1-212ENST00000524204 LHX6Q9UPM6 363 aa14.09□□□□□ -0.15
NPM1-212ENST00000524204 C2orf72A6NCS6 295 aa14.08□□□□□ -0.16
NPM1-212ENST00000524204 NLRP6P59044 892 aa14.08□□□□□ -0.16
NPM1-212ENST00000524204 PLA2G2EQ9NZK7 142 aa14.07□□□□□ -0.16
NPM1-212ENST00000524204 PBX2P40425 430 aa14.05□□□□□ -0.16
NPM1-212ENST00000524204 MFRPQ9BY79 579 aa14.03□□□□□ -0.16
NPM1-212ENST00000524204 BCL11BQ9C0K0 894 aaPredicted RBP14.02□□□□□ -0.17
NPM1-212ENST00000524204 PCDHGA4Q9Y5G9 962 aa14.02□□□□□ -0.17
NPM1-212ENST00000524204 HCSTQ9UBK5 93 aa13.99□□□□□ -0.17
NPM1-212ENST00000524204 SLC34A2O95436 690 aa13.97□□□□□ -0.17
NPM1-212ENST00000524204 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
NPM1-212ENST00000524204 ADGRD1Q6QNK2 874 aa13.95□□□□□ -0.18
NPM1-212ENST00000524204 ARHGAP33O14559 1287 aa13.9□□□□□ -0.18
NPM1-212ENST00000524204 KDM4FA0A1W2PPD8 638 aa13.87□□□□□ -0.19
NPM1-212ENST00000524204 DMRTA1Q5VZB9 504 aa13.87□□□□□ -0.19
NPM1-212ENST00000524204 HRO43593 1189 aa13.86□□□□□ -0.19
NPM1-212ENST00000524204 PSEN2P49810 448 aa13.85□□□□□ -0.19
NPM1-212ENST00000524204 TMC2Q8TDI7 906 aa13.84□□□□□ -0.19
NPM1-212ENST00000524204 STK25O00506 426 aa13.83□□□□□ -0.2
NPM1-212ENST00000524204 TK2O00142 265 aa13.8□□□□□ -0.2
NPM1-212ENST00000524204 PPP1R37O75864 691 aa13.8□□□□□ -0.2
NPM1-212ENST00000524204 TAOK2Q9UL54 1235 aa13.79□□□□□ -0.2
NPM1-212ENST00000524204 KCTD12Q96CX2 325 aaKnown RBP13.78□□□□□ -0.2
NPM1-212ENST00000524204 PSDA5PKW4 1024 aaPredicted RBP13.76□□□□□ -0.21
NPM1-212ENST00000524204 PTCD2Q8WV60 388 aaKnown RBP13.74□□□□□ -0.21
NPM1-212ENST00000524204 ECM2O94769 699 aaPredicted RBP13.65□□□□□ -0.22
NPM1-212ENST00000524204 PPP4R3BQ5MIZ7 849 aa13.65□□□□□ -0.22
NPM1-212ENST00000524204 PLPP6Q8IY26 295 aa13.65□□□□□ -0.22
NPM1-212ENST00000524204 RGL2O15211 777 aa13.64□□□□□ -0.23
NPM1-212ENST00000524204 PTPN5P54829 565 aa13.64□□□□□ -0.23
NPM1-212ENST00000524204 FOXK1P85037 733 aa13.64□□□□□ -0.23
NPM1-212ENST00000524204 KCNK17Q96T54 332 aa13.63□□□□□ -0.23
NPM1-212ENST00000524204 STAC3Q96MF2 364 aa13.61□□□□□ -0.23
NPM1-212ENST00000524204 VPS9D1Q9Y2B5 631 aa13.61□□□□□ -0.23
NPM1-212ENST00000524204 DSG2Q14126 1118 aa13.58□□□□□ -0.24
NPM1-212ENST00000524204 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
NPM1-212ENST00000524204 PKD2Q13563 968 aa13.55□□□□□ -0.24
NPM1-212ENST00000524204 TBC1D12O60347 775 aa13.52□□□□□ -0.25
NPM1-212ENST00000524204 IFFO2Q5TF58 517 aa13.52□□□□□ -0.25
NPM1-212ENST00000524204 RGS20O76081 388 aa13.51□□□□□ -0.25
NPM1-212ENST00000524204 IRX2Q9BZI1 471 aaPredicted RBP13.51□□□□□ -0.25
NPM1-212ENST00000524204 BHMG1C9JSJ3 638 aaPredicted RBP13.5□□□□□ -0.25
NPM1-212ENST00000524204 THSD4Q6ZMP0 1018 aa13.49□□□□□ -0.25
NPM1-212ENST00000524204 A0A0G2JS52 829 aa13.48□□□□□ -0.25
NPM1-212ENST00000524204 OXER1Q8TDS5 423 aa13.47□□□□□ -0.25
NPM1-212ENST00000524204 KCNH8Q96L42 1107 aa13.47□□□□□ -0.25
NPM1-212ENST00000524204 ZNF454Q8N9F8 522 aa13.46□□□□□ -0.25
NPM1-212ENST00000524204 SLC4A5Q9BY07 1137 aa13.46□□□□□ -0.25
NPM1-212ENST00000524204 BCL2L12Q9HB09 334 aa13.45□□□□□ -0.26
NPM1-212ENST00000524204 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
NPM1-212ENST00000524204 ZBED2Q9BTP6 218 aa13.42□□□□□ -0.26
NPM1-212ENST00000524204 WNT2BQ93097 391 aa13.41□□□□□ -0.26
NPM1-212ENST00000524204 FOSBP53539 338 aa13.39□□□□□ -0.27
NPM1-212ENST00000524204 GOLGA8CPA6NN73 597 aa13.36□□□□□ -0.27
NPM1-212ENST00000524204 PTPREP23469 700 aa13.36□□□□□ -0.27
NPM1-212ENST00000524204 MRPL50Q8N5N7 158 aaKnown RBP13.36□□□□□ -0.27
NPM1-212ENST00000524204 ADAM33Q9BZ11 813 aa13.31□□□□□ -0.28
NPM1-212ENST00000524204 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
NPM1-212ENST00000524204 CRISPLD2Q9H0B8 497 aa13.29□□□□□ -0.28
NPM1-212ENST00000524204 HS6ST3Q8IZP7 471 aa13.28□□□□□ -0.28
NPM1-212ENST00000524204 PPP1R15BQ5SWA1 713 aa13.27□□□□□ -0.29
NPM1-212ENST00000524204 ZDHHC16Q969W1 377 aa13.26□□□□□ -0.29
NPM1-212ENST00000524204 JPH4Q96JJ6 628 aa13.26□□□□□ -0.29
NPM1-212ENST00000524204 ITGBL1O95965 494 aaPredicted RBP13.23□□□□□ -0.29
NPM1-212ENST00000524204 NBPF3Q9H094 633 aa13.23□□□□□ -0.29
NPM1-212ENST00000524204 EVI5O60447 810 aa13.22□□□□□ -0.29
NPM1-212ENST00000524204 NKX1-1Q15270 411 aaPredicted RBP13.22□□□□□ -0.29
NPM1-212ENST00000524204 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
NPM1-212ENST00000524204 Q6ZNB5 142 aa13.21□□□□□ -0.29
NPM1-212ENST00000524204 PROX2Q3B8N5 592 aa13.2□□□□□ -0.3
NPM1-212ENST00000524204 BCAMP50895 628 aa13.19□□□□□ -0.3
NPM1-212ENST00000524204 COL9A1P20849 921 aa13.17□□□□□ -0.3
NPM1-212ENST00000524204 CHGAP10645 457 aaKnown RBP13.15□□□□□ -0.3
NPM1-212ENST00000524204 ANKK1Q8NFD2 765 aa13.15□□□□□ -0.3
NPM1-212ENST00000524204 RABGEF1Q9UJ41 708 aa13.15□□□□□ -0.3
NPM1-212ENST00000524204 LCE2BO14633 110 aa13.14□□□□□ -0.31
NPM1-212ENST00000524204 PPP1R3GB7ZBB8 358 aa13.13□□□□□ -0.31
NPM1-212ENST00000524204 PCDHGA10Q9Y5H3 936 aa13.12□□□□□ -0.31
NPM1-212ENST00000524204 SOWAHBA6NEL2 793 aa13.11□□□□□ -0.31
NPM1-212ENST00000524204 PDE4AP27815 886 aa13.1□□□□□ -0.31
NPM1-212ENST00000524204 WBP1LQ9NX94 342 aa13.1□□□□□ -0.31
NPM1-212ENST00000524204 DNAJC5Q9H3Z4 198 aa13.08□□□□□ -0.32
NPM1-212ENST00000524204 MAP3K9P80192 1104 aa13.07□□□□□ -0.32
NPM1-212ENST00000524204 ZFRQ96KR1 1074 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms