RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 AXIN2Q9Y2T1 843 aa7.11□□□□□ -1.27
LINC01339-204ENST00000524094 ADGRD1Q6QNK2 874 aa7.1□□□□□ -1.27
LINC01339-204ENST00000524094 LAPTM4AQ15012 233 aa7.09□□□□□ -1.27
LINC01339-204ENST00000524094 ZNF787Q6DD87 383 aa7.09□□□□□ -1.27
LINC01339-204ENST00000524094 PYGBP11216 843 aa7.06□□□□□ -1.28
LINC01339-204ENST00000524094 KHSRPQ92945 711 aaKnown RBP eCLIP7.04□□□□□ -1.28
LINC01339-204ENST00000524094 PTPN5P54829 565 aa7.03□□□□□ -1.28
LINC01339-204ENST00000524094 HRO43593 1189 aa7.01□□□□□ -1.29
LINC01339-204ENST00000524094 GFRA3O60609 400 aa6.99□□□□□ -1.29
LINC01339-204ENST00000524094 SLC24A1O60721 1099 aa6.98□□□□□ -1.29
LINC01339-204ENST00000524094 TMEM92Q6UXU6 159 aa6.98□□□□□ -1.29
LINC01339-204ENST00000524094 TK2O00142 265 aa6.96□□□□□ -1.3
LINC01339-204ENST00000524094 PLCD3Q8N3E9 789 aa6.96□□□□□ -1.3
LINC01339-204ENST00000524094 ZBTB47Q9UFB7 747 aaPredicted RBP6.96□□□□□ -1.3
LINC01339-204ENST00000524094 IFNLR1Q8IU57 520 aaPredicted RBP6.95□□□□□ -1.3
LINC01339-204ENST00000524094 STAC3Q96MF2 364 aa6.95□□□□□ -1.3
LINC01339-204ENST00000524094 ARHGAP33O14559 1287 aa6.94□□□□□ -1.3
LINC01339-204ENST00000524094 ZNF467Q7Z7K2 595 aaPredicted RBP6.92□□□□□ -1.3
LINC01339-204ENST00000524094 PSEN1P49768 467 aa6.91□□□□□ -1.3
LINC01339-204ENST00000524094 VASPP50552 380 aaPredicted RBP6.91□□□□□ -1.3
LINC01339-204ENST00000524094 FBXO3Q9UK99 471 aa6.9□□□□□ -1.3
LINC01339-204ENST00000524094 LHX6Q9UPM6 363 aa6.9□□□□□ -1.3
LINC01339-204ENST00000524094 NUDT7P0C024 238 aa6.88□□□□□ -1.31
LINC01339-204ENST00000524094 DMRTA1Q5VZB9 504 aa6.87□□□□□ -1.31
LINC01339-204ENST00000524094 NRG2O14511 850 aaPredicted RBP6.85□□□□□ -1.31
LINC01339-204ENST00000524094 PKD2Q13563 968 aa6.85□□□□□ -1.31
LINC01339-204ENST00000524094 CABP2Q9NPB3 220 aa6.84□□□□□ -1.31
LINC01339-204ENST00000524094 STK17AQ9UEE5 414 aa6.84□□□□□ -1.31
LINC01339-204ENST00000524094 SUZ12Q15022 739 aaKnown RBP6.82□□□□□ -1.32
LINC01339-204ENST00000524094 THSD4Q6ZMP0 1018 aa6.82□□□□□ -1.32
LINC01339-204ENST00000524094 MICALL2Q8IY33 904 aa6.82□□□□□ -1.32
LINC01339-204ENST00000524094 PSEN2P49810 448 aa6.81□□□□□ -1.32
LINC01339-204ENST00000524094 TREML4Q6UXN2 200 aa6.8□□□□□ -1.32
LINC01339-204ENST00000524094 LCE2AQ5TA79 106 aaPredicted RBP6.79□□□□□ -1.32
LINC01339-204ENST00000524094 ITGBL1O95965 494 aaPredicted RBP6.78□□□□□ -1.32
LINC01339-204ENST00000524094 PDAP1Q13442 181 aaKnown RBP6.74□□□□□ -1.33
LINC01339-204ENST00000524094 PSDA5PKW4 1024 aaPredicted RBP6.73□□□□□ -1.33
LINC01339-204ENST00000524094 WNT2BQ93097 391 aa6.7□□□□□ -1.34
LINC01339-204ENST00000524094 PLCB2Q00722 1185 aa6.69□□□□□ -1.34
LINC01339-204ENST00000524094 VPS9D1Q9Y2B5 631 aa6.69□□□□□ -1.34
LINC01339-204ENST00000524094 PCDHGA4Q9Y5G9 962 aa6.69□□□□□ -1.34
LINC01339-204ENST00000524094 GOLGA8CPA6NN73 597 aa6.68□□□□□ -1.34
LINC01339-204ENST00000524094 POTECB2RU33 542 aa6.67□□□□□ -1.34
LINC01339-204ENST00000524094 SPOCK2Q92563 424 aa6.67□□□□□ -1.34
LINC01339-204ENST00000524094 CHRM1P11229 460 aaPredicted RBP6.66□□□□□ -1.34
LINC01339-204ENST00000524094 INSM1Q01101 510 aaPredicted RBP6.65□□□□□ -1.34
LINC01339-204ENST00000524094 PRKD2Q9BZL6 878 aa6.64□□□□□ -1.35
LINC01339-204ENST00000524094 RGL2O15211 777 aa6.63□□□□□ -1.35
LINC01339-204ENST00000524094 KCNC4Q03721 635 aa6.63□□□□□ -1.35
LINC01339-204ENST00000524094 PDZRN3Q9UPQ7 1066 aa6.62□□□□□ -1.35
LINC01339-204ENST00000524094 BHMG1C9JSJ3 638 aaPredicted RBP6.61□□□□□ -1.35
LINC01339-204ENST00000524094 EFCAB3Q8N7B9 438 aa6.61□□□□□ -1.35
LINC01339-204ENST00000524094 KCNH8Q96L42 1107 aa6.61□□□□□ -1.35
LINC01339-204ENST00000524094 KCNK17Q96T54 332 aa6.61□□□□□ -1.35
LINC01339-204ENST00000524094 SLC34A2O95436 690 aa6.6□□□□□ -1.35
LINC01339-204ENST00000524094 GSE1Q14687 1217 aa6.6□□□□□ -1.35
LINC01339-204ENST00000524094 KLHL34Q8N239 644 aa6.6□□□□□ -1.35
LINC01339-204ENST00000524094 WFS1O76024 890 aa6.59□□□□□ -1.35
LINC01339-204ENST00000524094 WIPF1O43516 503 aa6.58□□□□□ -1.36
LINC01339-204ENST00000524094 PPP4R3BQ5MIZ7 849 aa6.58□□□□□ -1.36
LINC01339-204ENST00000524094 MRPL50Q8N5N7 158 aaKnown RBP6.58□□□□□ -1.36
LINC01339-204ENST00000524094 ECM2O94769 699 aaPredicted RBP6.57□□□□□ -1.36
LINC01339-204ENST00000524094 KDM2AQ9Y2K7 1162 aa6.57□□□□□ -1.36
LINC01339-204ENST00000524094 SLC4A5Q9BY07 1137 aa6.55□□□□□ -1.36
LINC01339-204ENST00000524094 V9GY48 417 aaPredicted RBP6.55□□□□□ -1.36
LINC01339-204ENST00000524094 BBXQ8WY36 941 aaPredicted RBP6.54□□□□□ -1.36
LINC01339-204ENST00000524094 RNF25Q96BH1 459 aaPredicted RBP6.54□□□□□ -1.36
LINC01339-204ENST00000524094 KDM4FA0A1W2PPD8 638 aa6.53□□□□□ -1.36
LINC01339-204ENST00000524094 KIF3CO14782 793 aa6.52□□□□□ -1.37
LINC01339-204ENST00000524094 MYT1Q01538 1121 aa6.52□□□□□ -1.37
LINC01339-204ENST00000524094 MS4A4AQ96JQ5 239 aa6.52□□□□□ -1.37
LINC01339-204ENST00000524094 KRTAP4-8Q9BYQ9 185 aa6.52□□□□□ -1.37
LINC01339-204ENST00000524094 C2orf72A6NCS6 295 aa6.5□□□□□ -1.37
LINC01339-204ENST00000524094 DCAF8L2P0C7V8 631 aa6.5□□□□□ -1.37
LINC01339-204ENST00000524094 HAP1P54257 671 aaPredicted RBP6.5□□□□□ -1.37
LINC01339-204ENST00000524094 VSIG10Q8N0Z9 540 aa6.49□□□□□ -1.37
LINC01339-204ENST00000524094 NYAP1Q6ZVC0 841 aa6.48□□□□□ -1.37
LINC01339-204ENST00000524094 DNAJC5Q9H3Z4 198 aa6.47□□□□□ -1.37
LINC01339-204ENST00000524094 TSHZ2Q9NRE2 1034 aa6.47□□□□□ -1.37
LINC01339-204ENST00000524094 CIZ1Q9ULV3 898 aaPredicted RBP6.47□□□□□ -1.37
LINC01339-204ENST00000524094 FAM181BA6NEQ2 426 aa6.46□□□□□ -1.38
LINC01339-204ENST00000524094 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.46□□□□□ -1.38
LINC01339-204ENST00000524094 PKDCCQ504Y2 493 aa6.46□□□□□ -1.38
LINC01339-204ENST00000524094 PAXIP1Q6ZW49 1069 aaPredicted RBP6.46□□□□□ -1.38
LINC01339-204ENST00000524094 NBPF3Q9H094 633 aa6.46□□□□□ -1.38
LINC01339-204ENST00000524094 SOX12O15370 315 aa6.45□□□□□ -1.38
LINC01339-204ENST00000524094 NFX1Q12986 1120 aaKnown RBP6.45□□□□□ -1.38
LINC01339-204ENST00000524094 NKX1-1Q15270 411 aaPredicted RBP6.45□□□□□ -1.38
LINC01339-204ENST00000524094 ANKK1Q8NFD2 765 aa6.45□□□□□ -1.38
LINC01339-204ENST00000524094 BCAMP50895 628 aa6.44□□□□□ -1.38
LINC01339-204ENST00000524094 CHGAP10645 457 aaKnown RBP6.43□□□□□ -1.38
LINC01339-204ENST00000524094 DGAT1O75907 488 aa6.42□□□□□ -1.38
LINC01339-204ENST00000524094 XP32Q5T750 250 aa6.42□□□□□ -1.38
LINC01339-204ENST00000524094 HS6ST3Q8IZP7 471 aa6.42□□□□□ -1.38
LINC01339-204ENST00000524094 CFAP44Q96MT7 982 aa6.42□□□□□ -1.38
LINC01339-204ENST00000524094 ZBED2Q9BTP6 218 aa6.42□□□□□ -1.38
LINC01339-204ENST00000524094 KRTAP9-2Q9BYQ4 174 aa6.42□□□□□ -1.38
LINC01339-204ENST00000524094 SPRYD3Q8NCJ5 442 aa6.41□□□□□ -1.38
LINC01339-204ENST00000524094 WBP1LQ9NX94 342 aa6.41□□□□□ -1.38
LINC01339-204ENST00000524094 PHF8Q9UPP1 1060 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms