RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 POGZQ7Z3K3 1410 aa27.36■■□□□ 1.97
SPIDR-221ENST00000523814 LRRIQ1Q96JM4 1722 aa27.36■■□□□ 1.97
SPIDR-221ENST00000523814 YEATS2Q9ULM3 1422 aa27.35■■□□□ 1.97
SPIDR-221ENST00000523814 MYO5CQ9NQX4 1742 aa27.34■■□□□ 1.97
SPIDR-221ENST00000523814 ZFYVE16Q7Z3T8 1539 aa27.34■■□□□ 1.97
SPIDR-221ENST00000523814 CCDC18Q5T9S5 1454 aa27.32■■□□□ 1.96
SPIDR-221ENST00000523814 PCF11O94913 1555 aaKnown RBP27.3■■□□□ 1.96
SPIDR-221ENST00000523814 MADDQ8WXG6 1647 aa27.29■■□□□ 1.96
SPIDR-221ENST00000523814 ARHGAP5Q13017 1502 aa27.27■■□□□ 1.96
SPIDR-221ENST00000523814 FYCO1Q9BQS8 1478 aa27.25■■□□□ 1.95
SPIDR-221ENST00000523814 ATP10AO60312 1499 aa27.25■■□□□ 1.95
SPIDR-221ENST00000523814 AFAP1Q8N556 730 aa27.24■■□□□ 1.95
SPIDR-221ENST00000523814 ZNF518AQ6AHZ1 1483 aa27.23■■□□□ 1.95
SPIDR-221ENST00000523814 SIGLEC1Q9BZZ2 1709 aa27.22■■□□□ 1.95
SPIDR-221ENST00000523814 CDC42BPBQ9Y5S2 1711 aa27.19■■□□□ 1.94
SPIDR-221ENST00000523814 RIMS1Q86UR5 1692 aaKnown RBP27.17■■□□□ 1.94
SPIDR-221ENST00000523814 C9orf84Q5VXU9 1444 aa27.17■■□□□ 1.94
SPIDR-221ENST00000523814 MLECQ14165 292 aa27.17■■□□□ 1.94
SPIDR-221ENST00000523814 KDM5CP41229 1560 aa27.17■■□□□ 1.94
SPIDR-221ENST00000523814 ILDR1Q86SU0 546 aaPredicted RBP27.16■■□□□ 1.94
SPIDR-221ENST00000523814 PREX2Q70Z35 1606 aa27.15■■□□□ 1.94
SPIDR-221ENST00000523814 ARHGEF12Q9NZN5 1544 aa27.12■■□□□ 1.93
SPIDR-221ENST00000523814 MLH3Q9UHC1 1453 aa27.12■■□□□ 1.93
SPIDR-221ENST00000523814 TRAPPC8Q9Y2L5 1435 aa27.11■■□□□ 1.93
SPIDR-221ENST00000523814 MYT1LQ9UL68 1186 aa27.11■■□□□ 1.93
SPIDR-221ENST00000523814 LMTK3Q96Q04 1460 aa27.11■■□□□ 1.93
SPIDR-221ENST00000523814 ABCC1P33527 1531 aa27.09■■□□□ 1.93
SPIDR-221ENST00000523814 CDC42BPAQ5VT25 1732 aa27.07■■□□□ 1.92
SPIDR-221ENST00000523814 PLPPR3Q6T4P5 718 aa27.07■■□□□ 1.92
SPIDR-221ENST00000523814 GPATCH8Q9UKJ3 1502 aaKnown RBP27.06■■□□□ 1.92
SPIDR-221ENST00000523814 REREQ9P2R6 1566 aa27.04■■□□□ 1.92
SPIDR-221ENST00000523814 DIP2CQ9Y2E4 1556 aa27.04■■□□□ 1.92
SPIDR-221ENST00000523814 FER1L4A9Z1Z3 1794 aa27.04■■□□□ 1.92
SPIDR-221ENST00000523814 ZNF777Q9ULD5 760 aaPredicted RBP27.03■■□□□ 1.92
SPIDR-221ENST00000523814 ITSN2Q9NZM3 1697 aa27.01■■□□□ 1.92
SPIDR-221ENST00000523814 MTUS2Q5JR59 1369 aa27■■□□□ 1.91
SPIDR-221ENST00000523814 CEP162Q5TB80 1403 aa26.99■■□□□ 1.91
SPIDR-221ENST00000523814 ABCA6Q8N139 1617 aa26.99■■□□□ 1.91
SPIDR-221ENST00000523814 CFDP1Q9UEE9 299 aaPredicted RBP26.99■■□□□ 1.91
SPIDR-221ENST00000523814 HNRNPMP52272 730 aaKnown RBP eCLIP26.98■■□□□ 1.916e-6■■□□□ 14.4
SPIDR-221ENST00000523814 HSPA2P54652 639 aa26.98■■□□□ 1.91
SPIDR-221ENST00000523814 CCNB3Q8WWL7 1395 aa26.97■■□□□ 1.91
SPIDR-221ENST00000523814 SAMD9LQ8IVG5 1584 aa26.97■■□□□ 1.91
SPIDR-221ENST00000523814 AGLP35573 1532 aa26.97■■□□□ 1.91
SPIDR-221ENST00000523814 CEBPAP49715 358 aaPredicted RBP26.97■■□□□ 1.91
SPIDR-221ENST00000523814 KIAA1107Q9UPP5 1409 aa26.97■■□□□ 1.91
SPIDR-221ENST00000523814 KIDINS220Q9ULH0 1771 aa26.95■■□□□ 1.9
SPIDR-221ENST00000523814 SPAG9O60271 1321 aaKnown RBP26.93■■□□□ 1.9
SPIDR-221ENST00000523814 PLEKHH2Q8IVE3 1493 aa26.93■■□□□ 1.9
SPIDR-221ENST00000523814 SYCP2Q9BX26 1530 aa26.92■■□□□ 1.9
SPIDR-221ENST00000523814 ESF1Q9H501 851 aaKnown RBP26.87■■□□□ 1.89
SPIDR-221ENST00000523814 EHBP1L1Q8N3D4 1523 aa26.86■■□□□ 1.89
SPIDR-221ENST00000523814 LOC105371045A0A1W2PR82 267 aa26.86■■□□□ 1.89
SPIDR-221ENST00000523814 ZNF644Q9H582 1327 aaPredicted RBP26.84■■□□□ 1.89
SPIDR-221ENST00000523814 FBXO41Q8TF61 875 aa26.83■■□□□ 1.89
SPIDR-221ENST00000523814 PREX1Q8TCU6 1659 aa26.82■■□□□ 1.88
SPIDR-221ENST00000523814 TIAM1Q13009 1591 aa26.82■■□□□ 1.88
SPIDR-221ENST00000523814 CNTLNQ9NXG0 1405 aa26.81■■□□□ 1.88
SPIDR-221ENST00000523814 ATP7AQ04656 1500 aa26.8■■□□□ 1.88
SPIDR-221ENST00000523814 SETD1BQ9UPS6 1966 aaKnown RBP26.8■■□□□ 1.88
SPIDR-221ENST00000523814 MBD5Q9P267 1494 aa26.79■■□□□ 1.88
SPIDR-221ENST00000523814 UHRF1BP1Q6BDS2 1440 aa26.78■■□□□ 1.88
SPIDR-221ENST00000523814 INO80Q9ULG1 1556 aaPredicted RBP26.78■■□□□ 1.88
SPIDR-221ENST00000523814 C3P01024 1663 aa26.77■■□□□ 1.88
SPIDR-221ENST00000523814 A2MP01023 1474 aa26.76■■□□□ 1.87
SPIDR-221ENST00000523814 NCOA2Q15596 1464 aa26.74■■□□□ 1.87
SPIDR-221ENST00000523814 PLXNC1O60486 1568 aa26.73■■□□□ 1.87
SPIDR-221ENST00000523814 RTEL1-TNFRSF6BF6WH68 1400 aa26.73■■□□□ 1.87
SPIDR-221ENST00000523814 VPS8Q8N3P4 1428 aa26.73■■□□□ 1.87
SPIDR-221ENST00000523814 DMRT2Q9Y5R5 561 aa26.72■■□□□ 1.87
SPIDR-221ENST00000523814 ZMYM3Q14202 1370 aa26.71■■□□□ 1.87
SPIDR-221ENST00000523814 SUPT6HQ7KZ85 1726 aaKnown RBP26.71■■□□□ 1.87
SPIDR-221ENST00000523814 RSPH4AQ5TD94 716 aa26.71■■□□□ 1.87
SPIDR-221ENST00000523814 PPP6R1Q9UPN7 881 aa26.7■■□□□ 1.86
SPIDR-221ENST00000523814 NPATQ14207 1427 aa26.68■■□□□ 1.86
SPIDR-221ENST00000523814 GGT6Q6P531 493 aa26.67■■□□□ 1.86
SPIDR-221ENST00000523814 MROH2AA6NES4 1674 aa26.66■■□□□ 1.86
SPIDR-221ENST00000523814 ADGBQ8N7X0 1667 aa26.66■■□□□ 1.86
SPIDR-221ENST00000523814 LRRC9Q6ZRR7 1453 aa26.65■■□□□ 1.86
SPIDR-221ENST00000523814 STRCQ7RTU9 1775 aa26.65■■□□□ 1.86
SPIDR-221ENST00000523814 DHX29Q7Z478 1369 aaKnown RBP26.64■■□□□ 1.86
SPIDR-221ENST00000523814 CERKQ8TCT0 537 aa26.64■■□□□ 1.86
SPIDR-221ENST00000523814 CAMSAP2Q08AD1 1489 aa26.63■■□□□ 1.85
SPIDR-221ENST00000523814 CCDC141Q6ZP82 1450 aa26.62■■□□□ 1.85
SPIDR-221ENST00000523814 MAP3K1Q13233 1512 aa26.61■■□□□ 1.85
SPIDR-221ENST00000523814 KANK4Q5T7N3 995 aaPredicted RBP26.6■■□□□ 1.85
SPIDR-221ENST00000523814 CLTCQ00610 1675 aaKnown RBP26.58■■□□□ 1.85
SPIDR-221ENST00000523814 PTPRTO14522 1441 aa26.57■■□□□ 1.84
SPIDR-221ENST00000523814 PTPRKQ15262 1439 aa26.56■■□□□ 1.84
SPIDR-221ENST00000523814 TSPY4P0CV99 314 aa26.56■■□□□ 1.84
SPIDR-221ENST00000523814 TSPY10P0CW01 314 aa26.56■■□□□ 1.84
SPIDR-221ENST00000523814 KIF3BO15066 747 aa26.55■■□□□ 1.84
SPIDR-221ENST00000523814 ARHGEF5Q12774 1597 aa26.54■■□□□ 1.84
SPIDR-221ENST00000523814 NCOA1Q15788 1441 aa26.54■■□□□ 1.84
SPIDR-221ENST00000523814 MIA2Q96PC5 1412 aa26.48■■□□□ 1.83
SPIDR-221ENST00000523814 MYOM3Q5VTT5 1437 aa26.47■■□□□ 1.83
SPIDR-221ENST00000523814 CAMSAP1Q5T5Y3 1602 aa26.47■■□□□ 1.83
SPIDR-221ENST00000523814 WASHC2CQ9Y4E1 1318 aa26.44■■□□□ 1.82
SPIDR-221ENST00000523814 NCKAP5LQ9HCH0 1330 aa26.43■■□□□ 1.82
SPIDR-221ENST00000523814 FAM135AQ9P2D6 1515 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms