RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, human

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-253	ENST00000523805	OTUD5	Q96G74	571 aa		14.26	□□□□□ -0.13
PTK2-253	ENST00000523805	TIE1	P35590	1138 aa		14.25	□□□□□ -0.13
PTK2-253	ENST00000523805	FAM212A	Q96EL1	285 aa		14.24	□□□□□ -0.13
PTK2-253	ENST00000523805	SGIP1	Q9BQI5	828 aa		14.24	□□□□□ -0.13
PTK2-253	ENST00000523805	CEP170	Q5SW79	1584 aa		14.22	□□□□□ -0.13
PTK2-253	ENST00000523805	GRIN2A	Q12879	1464 aa		14.22	□□□□□ -0.13
PTK2-253	ENST00000523805	ERCC6L2	Q5T890	1561 aa		14.21	□□□□□ -0.14
PTK2-253	ENST00000523805	PCDHB13	Q9Y5F0	798 aa		14.18	□□□□□ -0.14
PTK2-253	ENST00000523805	VASP	P50552	380 aa	Predicted RBP	14.17	□□□□□ -0.14
PTK2-253	ENST00000523805	TTLL13P	A6NNM8	815 aa		14.16	□□□□□ -0.14
PTK2-253	ENST00000523805	POTEJ	P0CG39	1038 aa		14.15	□□□□□ -0.14
PTK2-253	ENST00000523805	ERICH3	Q5RHP9	1530 aa		14.15	□□□□□ -0.14
PTK2-253	ENST00000523805	FHAD1	B1AJZ9	1412 aa		14.14	□□□□□ -0.15
PTK2-253	ENST00000523805	IFNL1	Q8IU54	200 aa		14.13	□□□□□ -0.15
PTK2-253	ENST00000523805	SHROOM2	Q13796	1616 aa		14.12	□□□□□ -0.15
PTK2-253	ENST00000523805	POTEF	A5A3E0	1075 aa		14.12	□□□□□ -0.15
PTK2-253	ENST00000523805	NUP160	Q12769	1436 aa		14.12	□□□□□ -0.15
PTK2-253	ENST00000523805	RUSC2	Q8N2Y8	1516 aa		14.08	□□□□□ -0.16
PTK2-253	ENST00000523805	TRIM35	Q9UPQ4	493 aa		14.06	□□□□□ -0.16
PTK2-253	ENST00000523805	IER5L	Q5T953	404 aa		14.04	□□□□□ -0.16
PTK2-253	ENST00000523805	DCAF8	Q5TAQ9	597 aa		14.04	□□□□□ -0.16
PTK2-253	ENST00000523805	MAMSTR	Q6ZN01	415 aa		14.04	□□□□□ -0.16
PTK2-253	ENST00000523805	PRG4	Q92954	1404 aa	Predicted RBP	14.03	□□□□□ -0.16
PTK2-253	ENST00000523805	CUL7	Q14999	1698 aa		14.02	□□□□□ -0.16
PTK2-253	ENST00000523805	PYGB	P11216	843 aa		14.01	□□□□□ -0.17
PTK2-253	ENST00000523805	COLQ	Q9Y215	455 aa	Predicted RBP	14.01	□□□□□ -0.17
PTK2-253	ENST00000523805	KIF13A	Q9H1H9	1805 aa		14	□□□□□ -0.17
PTK2-253	ENST00000523805	KLHL34	Q8N239	644 aa		14	□□□□□ -0.17
PTK2-253	ENST00000523805	TMEM106C	Q9BVX2	250 aa		13.99	□□□□□ -0.17
PTK2-253	ENST00000523805	KIF27	Q86VH2	1401 aa		13.98	□□□□□ -0.17
PTK2-253	ENST00000523805	GSE1	Q14687	1217 aa		13.96	□□□□□ -0.17
PTK2-253	ENST00000523805	SCUBE2	Q9NQ36	999 aa		13.96	□□□□□ -0.17
PTK2-253	ENST00000523805	JPH4	Q96JJ6	628 aa		13.95	□□□□□ -0.18
PTK2-253	ENST00000523805	SEC24B	O95487	1268 aa		13.94	□□□□□ -0.18
PTK2-253	ENST00000523805	ADCY10	Q96PN6	1610 aa		13.93	□□□□□ -0.18
PTK2-253	ENST00000523805	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.92	□□□□□ -0.18
PTK2-253	ENST00000523805	IGF1R	P08069	1367 aa		13.92	□□□□□ -0.18
PTK2-253	ENST00000523805	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.91	□□□□□ -0.18
PTK2-253	ENST00000523805	PCDHB8	Q9UN66	801 aa		13.91	□□□□□ -0.18
PTK2-253	ENST00000523805	KIAA0586	Q9BVV6	1533 aa		13.9	□□□□□ -0.19
PTK2-253	ENST00000523805	TSPOAP1	O95153	1857 aa		13.89	□□□□□ -0.19
PTK2-253	ENST00000523805	CHRM1	P11229	460 aa	Predicted RBP	13.88	□□□□□ -0.19
PTK2-253	ENST00000523805	IRX5	P78411	483 aa	Predicted RBP	13.87	□□□□□ -0.19
PTK2-253	ENST00000523805	CARMIL1	Q5VZK9	1371 aa		13.86	□□□□□ -0.19
PTK2-253	ENST00000523805	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.86	□□□□□ -0.19
PTK2-253	ENST00000523805	IQGAP2	Q13576	1575 aa		13.86	□□□□□ -0.19
PTK2-253	ENST00000523805	DIP2B	Q9P265	1576 aa		13.85	□□□□□ -0.19
PTK2-253	ENST00000523805	SPOCK2	Q92563	424 aa		13.84	□□□□□ -0.19
PTK2-253	ENST00000523805	PLCG2	P16885	1265 aa		13.83	□□□□□ -0.2
PTK2-253	ENST00000523805	MAPKBP1	O60336	1514 aa		13.83	□□□□□ -0.2
PTK2-253	ENST00000523805	POTEM	A6NI47	508 aa		13.82	□□□□□ -0.2
PTK2-253	ENST00000523805	LCE2D	Q5TA82	110 aa	Predicted RBP	13.82	□□□□□ -0.2
PTK2-253	ENST00000523805	CTTNBP2	Q8WZ74	1663 aa		13.81	□□□□□ -0.2
PTK2-253	ENST00000523805	FAM69C	Q0P6D2	419 aa		13.8	□□□□□ -0.2
PTK2-253	ENST00000523805	ABCC10	Q5T3U5	1492 aa		13.8	□□□□□ -0.2
PTK2-253	ENST00000523805	POTEG	Q6S5H5	508 aa		13.79	□□□□□ -0.2
PTK2-253	ENST00000523805	PTPRG	P23470	1445 aa		13.78	□□□□□ -0.2
PTK2-253	ENST00000523805	CARMIL2	Q6F5E8	1435 aa		13.78	□□□□□ -0.2
PTK2-253	ENST00000523805	OCEL1	Q9H607	264 aa		13.77	□□□□□ -0.21
PTK2-253	ENST00000523805	RAPGEF2	Q9Y4G8	1499 aa		13.76	□□□□□ -0.21
PTK2-253	ENST00000523805	KDM6B	O15054	1643 aa		13.75	□□□□□ -0.21
PTK2-253	ENST00000523805	KIAA0556	O60303	1618 aa		13.75	□□□□□ -0.21
PTK2-253	ENST00000523805	TNIK	Q9UKE5	1360 aa		13.74	□□□□□ -0.21
PTK2-253	ENST00000523805	DISP1	Q96F81	1524 aa		13.74	□□□□□ -0.21
PTK2-253	ENST00000523805	PSEN1	P49768	467 aa		13.72	□□□□□ -0.21
PTK2-253	ENST00000523805	ABCC2	Q92887	1545 aa		13.72	□□□□□ -0.21
PTK2-253	ENST00000523805	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.72	□□□□□ -0.21
PTK2-253	ENST00000523805	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.71	□□□□□ -0.21
PTK2-253	ENST00000523805	UGGT2	Q9NYU1	1516 aa		13.7	□□□□□ -0.22
PTK2-253	ENST00000523805	PDCD7	Q8N8D1	485 aa	Known RBP	13.7	□□□□□ -0.22
PTK2-253	ENST00000523805	PPRC1	Q5VV67	1664 aa	Known RBP	13.69	□□□□□ -0.22
PTK2-253	ENST00000523805	PDAP1	Q13442	181 aa	Known RBP	13.69	□□□□□ -0.22
PTK2-253	ENST00000523805	ASXL2	Q76L83	1435 aa		13.69	□□□□□ -0.22
PTK2-253	ENST00000523805	UACA	Q9BZF9	1416 aa		13.68	□□□□□ -0.22
PTK2-253	ENST00000523805	FAM163A	Q96GL9	167 aa	Predicted RBP	13.68	□□□□□ -0.22
PTK2-253	ENST00000523805	SLAIN1	Q8ND83	568 aa		13.67	□□□□□ -0.22
PTK2-253	ENST00000523805	UHRF1BP1L	A0JNW5	1464 aa		13.65	□□□□□ -0.22
PTK2-253	ENST00000523805	MKRN3	Q13064	507 aa	Known RBP	13.64	□□□□□ -0.23
PTK2-253	ENST00000523805	PLB1	Q6P1J6	1458 aa		13.63	□□□□□ -0.23
PTK2-253	ENST00000523805	GOLGA2	Q08379	1002 aa		13.63	□□□□□ -0.23
PTK2-253	ENST00000523805	ILDR1	Q86SU0	546 aa	Predicted RBP	13.63	□□□□□ -0.23
PTK2-253	ENST00000523805	MAP3K4	Q9Y6R4	1608 aa		13.62	□□□□□ -0.23
PTK2-253	ENST00000523805	GLI2	P10070	1586 aa		13.62	□□□□□ -0.23
PTK2-253	ENST00000523805	KDM5B	Q9UGL1	1544 aa		13.61	□□□□□ -0.23
PTK2-253	ENST00000523805	PCDH10	Q9P2E7	1040 aa		13.61	□□□□□ -0.23
PTK2-253	ENST00000523805	PLSCR2	Q9NRY7	297 aa		13.6	□□□□□ -0.23
PTK2-253	ENST00000523805	GOLGA3	Q08378	1498 aa		13.6	□□□□□ -0.23
PTK2-253	ENST00000523805	PRX	Q9BXM0	1461 aa		13.6	□□□□□ -0.23
PTK2-253	ENST00000523805	EPRS	P07814	1512 aa	Known RBP	13.59	□□□□□ -0.23
PTK2-253	ENST00000523805	ARID3C	A6NKF2	412 aa		13.58	□□□□□ -0.24
PTK2-253	ENST00000523805	ABCA8	O94911	1581 aa		13.58	□□□□□ -0.24
PTK2-253	ENST00000523805	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	2e-7	■□□□□ 8.1
PTK2-253	ENST00000523805	P3H3	Q8IVL6	736 aa		13.56	□□□□□ -0.24
PTK2-253	ENST00000523805	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.56	□□□□□ -0.24
PTK2-253	ENST00000523805	WDR7	Q9Y4E6	1490 aa		13.55	□□□□□ -0.24
PTK2-253	ENST00000523805	RANGAP1	P46060	587 aa	Predicted RBP	13.55	□□□□□ -0.24
PTK2-253	ENST00000523805	CABP2	Q9NPB3	220 aa		13.54	□□□□□ -0.24
PTK2-253	ENST00000523805	CFAP43	Q8NDM7	1665 aa		13.53	□□□□□ -0.24
PTK2-253	ENST00000523805	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.53	□□□□□ -0.24
PTK2-253	ENST00000523805	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.53	□□□□□ -0.24

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