RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 SUPT6HQ7KZ85 1726 aaKnown RBP25.34■■□□□ 1.65
TRAPPC9-214ENST00000523777 CCNB3Q8WWL7 1395 aa25.34■■□□□ 1.65
TRAPPC9-214ENST00000523777 CDC42BPAQ5VT25 1732 aa25.33■■□□□ 1.65
TRAPPC9-214ENST00000523777 CDC42BPBQ9Y5S2 1711 aa25.33■■□□□ 1.65
TRAPPC9-214ENST00000523777 DENND4BO75064 1496 aaPredicted RBP25.32■■□□□ 1.64
TRAPPC9-214ENST00000523777 ADGRL1O94910 1474 aa25.31■■□□□ 1.64
TRAPPC9-214ENST00000523777 GPATCH8Q9UKJ3 1502 aaKnown RBP25.3■■□□□ 1.64
TRAPPC9-214ENST00000523777 ITSN2Q9NZM3 1697 aa25.29■■□□□ 1.64
TRAPPC9-214ENST00000523777 NCOA2Q15596 1464 aa25.27■■□□□ 1.64
TRAPPC9-214ENST00000523777 CFDP1Q9UEE9 299 aaPredicted RBP25.26■■□□□ 1.63
TRAPPC9-214ENST00000523777 SCAPERQ9BY12 1400 aa25.26■■□□□ 1.63
TRAPPC9-214ENST00000523777 RAPGEF3O95398 923 aa25.24■■□□□ 1.63
TRAPPC9-214ENST00000523777 RICTORQ6R327 1708 aa25.23■■□□□ 1.63
TRAPPC9-214ENST00000523777 KANK4Q5T7N3 995 aaPredicted RBP25.23■■□□□ 1.63
TRAPPC9-214ENST00000523777 PLEKHH2Q8IVE3 1493 aa25.22■■□□□ 1.63
TRAPPC9-214ENST00000523777 POGZQ7Z3K3 1410 aa25.2■■□□□ 1.63
TRAPPC9-214ENST00000523777 FRMPD1Q5SYB0 1578 aa25.19■■□□□ 1.62
TRAPPC9-214ENST00000523777 ZNF777Q9ULD5 760 aaPredicted RBP25.19■■□□□ 1.62
TRAPPC9-214ENST00000523777 ZNF518AQ6AHZ1 1483 aa25.19■■□□□ 1.62
TRAPPC9-214ENST00000523777 ABCC1P33527 1531 aa25.18■■□□□ 1.62
TRAPPC9-214ENST00000523777 MAGI2Q86UL8 1455 aa25.18■■□□□ 1.62
TRAPPC9-214ENST00000523777 ZMYM4Q5VZL5 1548 aa25.17■■□□□ 1.62
TRAPPC9-214ENST00000523777 KIAA1107Q9UPP5 1409 aa25.17■■□□□ 1.62
TRAPPC9-214ENST00000523777 SAMD9LQ8IVG5 1584 aa25.15■■□□□ 1.62
TRAPPC9-214ENST00000523777 MIA2Q96PC5 1412 aa25.11■■□□□ 1.61
TRAPPC9-214ENST00000523777 KDM5CP41229 1560 aa25.1■■□□□ 1.61
TRAPPC9-214ENST00000523777 MYOM3Q5VTT5 1437 aa25.1■■□□□ 1.61
TRAPPC9-214ENST00000523777 RSPH4AQ5TD94 716 aa25.09■■□□□ 1.61
TRAPPC9-214ENST00000523777 SYCP2Q9BX26 1530 aa25.08■■□□□ 1.61
TRAPPC9-214ENST00000523777 ARHGEF12Q9NZN5 1544 aa25.08■■□□□ 1.61
TRAPPC9-214ENST00000523777 AFAP1Q8N556 730 aa25.08■■□□□ 1.61
TRAPPC9-214ENST00000523777 ZFYVE16Q7Z3T8 1539 aa25.07■■□□□ 1.6
TRAPPC9-214ENST00000523777 ARHGEF40Q8TER5 1519 aa25.07■■□□□ 1.6
TRAPPC9-214ENST00000523777 TRAPPC8Q9Y2L5 1435 aa25.06■■□□□ 1.6
TRAPPC9-214ENST00000523777 MLH3Q9UHC1 1453 aa25.06■■□□□ 1.6
TRAPPC9-214ENST00000523777 HNRNPMP52272 730 aaKnown RBP eCLIP25.05■■□□□ 1.6
TRAPPC9-214ENST00000523777 MYT1LQ9UL68 1186 aa25.05■■□□□ 1.6
TRAPPC9-214ENST00000523777 HECW2Q9P2P5 1572 aa25.05■■□□□ 1.6
TRAPPC9-214ENST00000523777 CAMSAP2Q08AD1 1489 aa25.04■■□□□ 1.6
TRAPPC9-214ENST00000523777 ZNF644Q9H582 1327 aaPredicted RBP25.02■■□□□ 1.6
TRAPPC9-214ENST00000523777 SPAG9O60271 1321 aaKnown RBP25■■□□□ 1.59
TRAPPC9-214ENST00000523777 MBD5Q9P267 1494 aa25■■□□□ 1.59
TRAPPC9-214ENST00000523777 ATP10AO60312 1499 aa24.99■■□□□ 1.59
TRAPPC9-214ENST00000523777 YEATS2Q9ULM3 1422 aa24.99■■□□□ 1.59
TRAPPC9-214ENST00000523777 ARHGEF5Q12774 1597 aa24.97■■□□□ 1.59
TRAPPC9-214ENST00000523777 CCDC141Q6ZP82 1450 aa24.96■■□□□ 1.59
TRAPPC9-214ENST00000523777 C9orf84Q5VXU9 1444 aa24.95■■□□□ 1.59
TRAPPC9-214ENST00000523777 FGD6Q6ZV73 1430 aa24.95■■□□□ 1.59
TRAPPC9-214ENST00000523777 KIDINS220Q9ULH0 1771 aa24.94■■□□□ 1.58
TRAPPC9-214ENST00000523777 RTEL1-TNFRSF6BF6WH68 1400 aa24.94■■□□□ 1.58
TRAPPC9-214ENST00000523777 PTPN23Q9H3S7 1636 aa24.94■■□□□ 1.58
TRAPPC9-214ENST00000523777 ARID4BQ4LE39 1312 aaPredicted RBP24.93■■□□□ 1.58
TRAPPC9-214ENST00000523777 TSPY4P0CV99 314 aa24.93■■□□□ 1.58
TRAPPC9-214ENST00000523777 TSPY10P0CW01 314 aa24.93■■□□□ 1.58
TRAPPC9-214ENST00000523777 ATP7AQ04656 1500 aa24.92■■□□□ 1.58
TRAPPC9-214ENST00000523777 REREQ9P2R6 1566 aa24.92■■□□□ 1.58
TRAPPC9-214ENST00000523777 INO80Q9ULG1 1556 aaPredicted RBP24.91■■□□□ 1.58
TRAPPC9-214ENST00000523777 DIP2CQ9Y2E4 1556 aa24.91■■□□□ 1.58
TRAPPC9-214ENST00000523777 TCOF1Q13428 1488 aaKnown RBP24.9■■□□□ 1.58
TRAPPC9-214ENST00000523777 ABCA6Q8N139 1617 aa24.89■■□□□ 1.57
TRAPPC9-214ENST00000523777 KDM4FA0A1W2PPD8 638 aa24.86■■□□□ 1.57
TRAPPC9-214ENST00000523777 BCORL1Q5H9F3 1711 aa24.84■■□□□ 1.57
TRAPPC9-214ENST00000523777 ADGBQ8N7X0 1667 aa24.84■■□□□ 1.57
TRAPPC9-214ENST00000523777 AGLP35573 1532 aa24.83■■□□□ 1.57
TRAPPC9-214ENST00000523777 AEBP2Q6ZN18 517 aaPredicted RBP24.83■■□□□ 1.57
TRAPPC9-214ENST00000523777 MAST1Q9Y2H9 1570 aa24.83■■□□□ 1.57
TRAPPC9-214ENST00000523777 PPARGC1BQ86YN6 1023 aaKnown RBP24.8■■□□□ 1.56
TRAPPC9-214ENST00000523777 A2MP01023 1474 aa24.8■■□□□ 1.56
TRAPPC9-214ENST00000523777 SHANK2Q9UPX8 1470 aa24.8■■□□□ 1.56
TRAPPC9-214ENST00000523777 DNMT1P26358 1616 aaKnown RBP24.79■■□□□ 1.56
TRAPPC9-214ENST00000523777 ADAMTSL3P82987 1691 aa24.79■■□□□ 1.56
TRAPPC9-214ENST00000523777 FAM50AQ14320 339 aaKnown RBP24.79■■□□□ 1.56
TRAPPC9-214ENST00000523777 DAPK1P53355 1430 aa24.78■■□□□ 1.56
TRAPPC9-214ENST00000523777 CROCC2H7BZ55 1655 aa24.77■■□□□ 1.56
TRAPPC9-214ENST00000523777 SIGLEC1Q9BZZ2 1709 aa24.77■■□□□ 1.56
TRAPPC9-214ENST00000523777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.77■■□□□ 1.56
TRAPPC9-214ENST00000523777 ABCC5O15440 1437 aa24.77■■□□□ 1.56
TRAPPC9-214ENST00000523777 DHX29Q7Z478 1369 aaKnown RBP24.75■■□□□ 1.55
TRAPPC9-214ENST00000523777 PLXNC1O60486 1568 aa24.75■■□□□ 1.55
TRAPPC9-214ENST00000523777 MLECQ14165 292 aa24.72■■□□□ 1.55
TRAPPC9-214ENST00000523777 ANKRD30AQ9BXX3 1397 aa24.69■■□□□ 1.54
TRAPPC9-214ENST00000523777 MADDQ8WXG6 1647 aa24.69■■□□□ 1.54
TRAPPC9-214ENST00000523777 PPP6R1Q9UPN7 881 aa24.69■■□□□ 1.54
TRAPPC9-214ENST00000523777 FER1L4A9Z1Z3 1794 aa24.68■■□□□ 1.54
TRAPPC9-214ENST00000523777 ESF1Q9H501 851 aaKnown RBP24.68■■□□□ 1.54
TRAPPC9-214ENST00000523777 RRBP1Q9P2E9 1410 aaKnown RBP24.68■■□□□ 1.54
TRAPPC9-214ENST00000523777 DUOX2Q9NRD8 1548 aa24.66■■□□□ 1.54
TRAPPC9-214ENST00000523777 PTPRMP28827 1452 aa24.64■■□□□ 1.54
TRAPPC9-214ENST00000523777 CNTLNQ9NXG0 1405 aa24.64■■□□□ 1.54
TRAPPC9-214ENST00000523777 RIMS1Q86UR5 1692 aaKnown RBP24.64■■□□□ 1.53
TRAPPC9-214ENST00000523777 KIF15Q9NS87 1388 aa24.64■■□□□ 1.53
TRAPPC9-214ENST00000523777 ADGRL2O95490 1459 aa24.64■■□□□ 1.53
TRAPPC9-214ENST00000523777 EIF2AK4Q9P2K8 1649 aaKnown RBP24.62■■□□□ 1.53
TRAPPC9-214ENST00000523777 KIF3BO15066 747 aa24.62■■□□□ 1.53
TRAPPC9-214ENST00000523777 NCOA1Q15788 1441 aa24.61■■□□□ 1.53
TRAPPC9-214ENST00000523777 CHIC2Q9UKJ5 165 aa24.61■■□□□ 1.53
TRAPPC9-214ENST00000523777 GGT6Q6P531 493 aa24.6■■□□□ 1.53
TRAPPC9-214ENST00000523777 RRP7BPQ9NSQ0 103 aa24.6■■□□□ 1.53
TRAPPC9-214ENST00000523777 ERBINQ96RT1 1412 aa24.6■■□□□ 1.53
TRAPPC9-214ENST00000523777 FAM135AQ9P2D6 1515 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms