RNA–Protein interactions for RNA: ENST00000523742.1

LINC01947-201, Transcript of long intergenic non-protein coding RNA 1947, humanhuman

TSL 4 BASIC

Gene LINC01947, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01947-201ENST00000523742 ZNF316A6NFI3 1004 aaPredicted RBP12.93□□□□□ -0.34
LINC01947-201ENST00000523742 POTEEQ6S8J3 1075 aa12.92□□□□□ -0.34
LINC01947-201ENST00000523742 MS4A4AQ96JQ5 239 aa12.9□□□□□ -0.34
LINC01947-201ENST00000523742 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
LINC01947-201ENST00000523742 AXIN2Q9Y2T1 843 aa12.85□□□□□ -0.35
LINC01947-201ENST00000523742 HCSTQ9UBK5 93 aa12.8□□□□□ -0.36
LINC01947-201ENST00000523742 IFNLR1Q8IU57 520 aaPredicted RBP12.77□□□□□ -0.37
LINC01947-201ENST00000523742 SPOCK2Q92563 424 aa12.77□□□□□ -0.37
LINC01947-201ENST00000523742 PHF8Q9UPP1 1060 aa12.77□□□□□ -0.37
LINC01947-201ENST00000523742 NUDT7P0C024 238 aa12.76□□□□□ -0.37
LINC01947-201ENST00000523742 PBX2P40425 430 aa12.73□□□□□ -0.37
LINC01947-201ENST00000523742 LHX6Q9UPM6 363 aa12.73□□□□□ -0.37
LINC01947-201ENST00000523742 SOX12O15370 315 aa12.71□□□□□ -0.37
LINC01947-201ENST00000523742 ADGRD1Q6QNK2 874 aa12.68□□□□□ -0.38
LINC01947-201ENST00000523742 KIF3CO14782 793 aa12.63□□□□□ -0.39
LINC01947-201ENST00000523742 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
LINC01947-201ENST00000523742 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.61□□□□□ -0.39
LINC01947-201ENST00000523742 ZFP91Q96JP5 570 aaPredicted RBP12.61□□□□□ -0.39
LINC01947-201ENST00000523742 C2orf72A6NCS6 295 aa12.6□□□□□ -0.39
LINC01947-201ENST00000523742 PCDHGA4Q9Y5G9 962 aa12.6□□□□□ -0.39
LINC01947-201ENST00000523742 HRO43593 1189 aa12.59□□□□□ -0.39
LINC01947-201ENST00000523742 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.4
LINC01947-201ENST00000523742 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
LINC01947-201ENST00000523742 FBXO22Q8NEZ5 403 aa12.57□□□□□ -0.4
LINC01947-201ENST00000523742 KCTD12Q96CX2 325 aaKnown RBP12.55□□□□□ -0.4
LINC01947-201ENST00000523742 PSEN2P49810 448 aa12.54□□□□□ -0.4
LINC01947-201ENST00000523742 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.41
LINC01947-201ENST00000523742 SLC34A2O95436 690 aa12.5□□□□□ -0.41
LINC01947-201ENST00000523742 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
LINC01947-201ENST00000523742 IRX2Q9BZI1 471 aaPredicted RBP12.49□□□□□ -0.41
LINC01947-201ENST00000523742 TK2O00142 265 aa12.48□□□□□ -0.41
LINC01947-201ENST00000523742 KDM4FA0A1W2PPD8 638 aa12.47□□□□□ -0.41
LINC01947-201ENST00000523742 NLRP6P59044 892 aa12.47□□□□□ -0.41
LINC01947-201ENST00000523742 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
LINC01947-201ENST00000523742 MFRPQ9BY79 579 aa12.44□□□□□ -0.42
LINC01947-201ENST00000523742 PTPN5P54829 565 aa12.41□□□□□ -0.42
LINC01947-201ENST00000523742 RGS20O76081 388 aa12.4□□□□□ -0.42
LINC01947-201ENST00000523742 A0A0G2JS52 829 aa12.36□□□□□ -0.43
LINC01947-201ENST00000523742 IFFO2Q5TF58 517 aa12.36□□□□□ -0.43
LINC01947-201ENST00000523742 BCL11BQ9C0K0 894 aaPredicted RBP12.36□□□□□ -0.43
LINC01947-201ENST00000523742 PSDA5PKW4 1024 aaPredicted RBP12.35□□□□□ -0.43
LINC01947-201ENST00000523742 TMC2Q8TDI7 906 aa12.31□□□□□ -0.44
LINC01947-201ENST00000523742 STAC3Q96MF2 364 aa12.3□□□□□ -0.44
LINC01947-201ENST00000523742 KCNK17Q96T54 332 aa12.3□□□□□ -0.44
LINC01947-201ENST00000523742 VPS9D1Q9Y2B5 631 aa12.3□□□□□ -0.44
LINC01947-201ENST00000523742 PTCD2Q8WV60 388 aaKnown RBP12.28□□□□□ -0.44
LINC01947-201ENST00000523742 STK24Q9Y6E0 443 aa12.28□□□□□ -0.44
LINC01947-201ENST00000523742 PPP4R3BQ5MIZ7 849 aa12.26□□□□□ -0.45
LINC01947-201ENST00000523742 THSD4Q6ZMP0 1018 aa12.25□□□□□ -0.45
LINC01947-201ENST00000523742 PPP1R37O75864 691 aa12.21□□□□□ -0.45
LINC01947-201ENST00000523742 Q6ZNB5 142 aa12.21□□□□□ -0.45
LINC01947-201ENST00000523742 ABCC9O60706 1549 aa12.2□□□□□ -0.46
LINC01947-201ENST00000523742 BHMG1C9JSJ3 638 aaPredicted RBP12.19□□□□□ -0.46
LINC01947-201ENST00000523742 LCE2BO14633 110 aa12.19□□□□□ -0.46
LINC01947-201ENST00000523742 STK25O00506 426 aa12.14□□□□□ -0.47
LINC01947-201ENST00000523742 PLPP6Q8IY26 295 aa12.14□□□□□ -0.47
LINC01947-201ENST00000523742 WNT2BQ93097 391 aa12.14□□□□□ -0.47
LINC01947-201ENST00000523742 CCDC180Q9P1Z9 1646 aa12.13□□□□□ -0.47
LINC01947-201ENST00000523742 FOXK1P85037 733 aa12.11□□□□□ -0.47
LINC01947-201ENST00000523742 SLC4A5Q9BY07 1137 aa12.1□□□□□ -0.47
LINC01947-201ENST00000523742 KCNH8Q96L42 1107 aa12.08□□□□□ -0.48
LINC01947-201ENST00000523742 DSG2Q14126 1118 aa12.07□□□□□ -0.48
LINC01947-201ENST00000523742 ZBED2Q9BTP6 218 aa12.06□□□□□ -0.48
LINC01947-201ENST00000523742 BCL2L12Q9HB09 334 aa12.06□□□□□ -0.48
LINC01947-201ENST00000523742 ZNF454Q8N9F8 522 aa12.05□□□□□ -0.48
LINC01947-201ENST00000523742 GOLGA8CPA6NN73 597 aa12.04□□□□□ -0.48
LINC01947-201ENST00000523742 ITGBL1O95965 494 aaPredicted RBP12.04□□□□□ -0.48
LINC01947-201ENST00000523742 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
LINC01947-201ENST00000523742 TBC1D12O60347 775 aa12.02□□□□□ -0.49
LINC01947-201ENST00000523742 GPHNQ9NQX3 736 aaPredicted RBP12.02□□□□□ -0.49
LINC01947-201ENST00000523742 TAOK2Q9UL54 1235 aa12.02□□□□□ -0.49
LINC01947-201ENST00000523742 OXER1Q8TDS5 423 aa11.97□□□□□ -0.49
LINC01947-201ENST00000523742 PTPREP23469 700 aa11.96□□□□□ -0.49
LINC01947-201ENST00000523742 FOSBP53539 338 aa11.96□□□□□ -0.49
LINC01947-201ENST00000523742 UPF1Q92900 1129 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC01947-201ENST00000523742 TRAF7Q6Q0C0 670 aa11.94□□□□□ -0.5
LINC01947-201ENST00000523742 BCAMP50895 628 aa11.92□□□□□ -0.5
LINC01947-201ENST00000523742 ADAM33Q9BZ11 813 aa11.91□□□□□ -0.5
LINC01947-201ENST00000523742 NBPF3Q9H094 633 aa11.9□□□□□ -0.5
LINC01947-201ENST00000523742 GFRA3O60609 400 aa11.88□□□□□ -0.51
LINC01947-201ENST00000523742 RGL2O15211 777 aa11.87□□□□□ -0.51
LINC01947-201ENST00000523742 PROX2Q3B8N5 592 aa11.85□□□□□ -0.51
LINC01947-201ENST00000523742 LAPTM4AQ15012 233 aa11.84□□□□□ -0.51
LINC01947-201ENST00000523742 ANKK1Q8NFD2 765 aa11.84□□□□□ -0.51
LINC01947-201ENST00000523742 ECM2O94769 699 aaPredicted RBP11.83□□□□□ -0.52
LINC01947-201ENST00000523742 WBP1LQ9NX94 342 aa11.83□□□□□ -0.52
LINC01947-201ENST00000523742 KCNC4Q03721 635 aa11.82□□□□□ -0.52
LINC01947-201ENST00000523742 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
LINC01947-201ENST00000523742 JPH4Q96JJ6 628 aa11.82□□□□□ -0.52
LINC01947-201ENST00000523742 ANO8Q9HCE9 1232 aaPredicted RBP11.82□□□□□ -0.52
LINC01947-201ENST00000523742 SOWAHBA6NEL2 793 aa11.81□□□□□ -0.52
LINC01947-201ENST00000523742 COL9A1P20849 921 aa11.79□□□□□ -0.52
LINC01947-201ENST00000523742 RABGEF1Q9UJ41 708 aa11.79□□□□□ -0.52
LINC01947-201ENST00000523742 EVI5O60447 810 aa11.75□□□□□ -0.53
LINC01947-201ENST00000523742 ZNF775Q96BV0 537 aaPredicted RBP11.75□□□□□ -0.53
LINC01947-201ENST00000523742 PPP1R3GB7ZBB8 358 aa11.74□□□□□ -0.53
LINC01947-201ENST00000523742 ZFRQ96KR1 1074 aaKnown RBP11.74□□□□□ -0.53
LINC01947-201ENST00000523742 ZNF787Q6DD87 383 aa11.73□□□□□ -0.53
LINC01947-201ENST00000523742 NRG2O14511 850 aaPredicted RBP11.72□□□□□ -0.53
LINC01947-201ENST00000523742 PPP1R15BQ5SWA1 713 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms