RNA–Protein interactions for RNA: ENST00000523639.5

CCNC-214, Transcript of cyclin C, humanhuman

TSL 2

Gene CCNC, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-214ENST00000523639 ARHGAP5Q13017 1502 aa27.51■■■□□ 2
CCNC-214ENST00000523639 ZMYM4Q5VZL5 1548 aa27.51■■■□□ 2
CCNC-214ENST00000523639 POGZQ7Z3K3 1410 aa27.5■■□□□ 1.99
CCNC-214ENST00000523639 MTUS2Q5JR59 1369 aa27.48■■□□□ 1.99
CCNC-214ENST00000523639 ZNF518AQ6AHZ1 1483 aa27.45■■□□□ 1.99
CCNC-214ENST00000523639 ARHGEF40Q8TER5 1519 aa27.44■■□□□ 1.98
CCNC-214ENST00000523639 ARID4BQ4LE39 1312 aaPredicted RBP27.43■■□□□ 1.98
CCNC-214ENST00000523639 ZFYVE16Q7Z3T8 1539 aa27.41■■□□□ 1.98
CCNC-214ENST00000523639 PREX2Q70Z35 1606 aa27.41■■□□□ 1.98
CCNC-214ENST00000523639 CDC42BPBQ9Y5S2 1711 aa27.41■■□□□ 1.98
CCNC-214ENST00000523639 AFAP1Q8N556 730 aa27.4■■□□□ 1.98
CCNC-214ENST00000523639 GPATCH8Q9UKJ3 1502 aaKnown RBP27.4■■□□□ 1.98
CCNC-214ENST00000523639 CCNB3Q8WWL7 1395 aa27.38■■□□□ 1.97
CCNC-214ENST00000523639 VPS8Q8N3P4 1428 aa27.38■■□□□ 1.97
CCNC-214ENST00000523639 YEATS2Q9ULM3 1422 aa27.37■■□□□ 1.97
CCNC-214ENST00000523639 CFDP1Q9UEE9 299 aaPredicted RBP27.36■■□□□ 1.97
CCNC-214ENST00000523639 ATP10AO60312 1499 aa27.36■■□□□ 1.97
CCNC-214ENST00000523639 KDM5CP41229 1560 aa27.35■■□□□ 1.97
CCNC-214ENST00000523639 EHBP1L1Q8N3D4 1523 aa27.34■■□□□ 1.97
CCNC-214ENST00000523639 CDC42BPAQ5VT25 1732 aa27.33■■□□□ 1.97
CCNC-214ENST00000523639 MLH3Q9UHC1 1453 aa27.33■■□□□ 1.97
CCNC-214ENST00000523639 ABCC1P33527 1531 aa27.32■■□□□ 1.96
CCNC-214ENST00000523639 ADAMTSL3P82987 1691 aa27.32■■□□□ 1.96
CCNC-214ENST00000523639 KIAA1107Q9UPP5 1409 aa27.32■■□□□ 1.96
CCNC-214ENST00000523639 PLEKHH2Q8IVE3 1493 aa27.32■■□□□ 1.96
CCNC-214ENST00000523639 ZNF777Q9ULD5 760 aaPredicted RBP27.31■■□□□ 1.96
CCNC-214ENST00000523639 C9orf84Q5VXU9 1444 aa27.3■■□□□ 1.96
CCNC-214ENST00000523639 BCORL1Q5H9F3 1711 aa27.3■■□□□ 1.96
CCNC-214ENST00000523639 MYT1LQ9UL68 1186 aa27.29■■□□□ 1.96
CCNC-214ENST00000523639 ARHGEF12Q9NZN5 1544 aa27.29■■□□□ 1.96
CCNC-214ENST00000523639 TRAPPC8Q9Y2L5 1435 aa27.28■■□□□ 1.96
CCNC-214ENST00000523639 MAP3K1Q13233 1512 aa27.26■■□□□ 1.95
CCNC-214ENST00000523639 PTPRMP28827 1452 aa27.25■■□□□ 1.95
CCNC-214ENST00000523639 HECW2Q9P2P5 1572 aa27.24■■□□□ 1.95
CCNC-214ENST00000523639 HNRNPMP52272 730 aaKnown RBP eCLIP27.23■■□□□ 1.958e-10■■■■□ 20.8
CCNC-214ENST00000523639 TIAM1Q13009 1591 aa27.22■■□□□ 1.95
CCNC-214ENST00000523639 ITSN2Q9NZM3 1697 aa27.22■■□□□ 1.95
CCNC-214ENST00000523639 SAMD9LQ8IVG5 1584 aa27.22■■□□□ 1.95
CCNC-214ENST00000523639 REREQ9P2R6 1566 aa27.2■■□□□ 1.94
CCNC-214ENST00000523639 SPAG9O60271 1321 aaKnown RBP27.19■■□□□ 1.94
CCNC-214ENST00000523639 RSPH4AQ5TD94 716 aa27.19■■□□□ 1.94
CCNC-214ENST00000523639 NCOA2Q15596 1464 aa27.19■■□□□ 1.94
CCNC-214ENST00000523639 LRRC9Q6ZRR7 1453 aa27.19■■□□□ 1.94
CCNC-214ENST00000523639 SYCP2Q9BX26 1530 aa27.16■■□□□ 1.94
CCNC-214ENST00000523639 MADDQ8WXG6 1647 aa27.16■■□□□ 1.94
CCNC-214ENST00000523639 SUPT6HQ7KZ85 1726 aaKnown RBP27.16■■□□□ 1.94
CCNC-214ENST00000523639 DIP2CQ9Y2E4 1556 aa27.15■■□□□ 1.94
CCNC-214ENST00000523639 APLP2Q06481 763 aa27.15■■□□□ 1.94
CCNC-214ENST00000523639 MLECQ14165 292 aa27.15■■□□□ 1.94
CCNC-214ENST00000523639 AGLP35573 1532 aa27.13■■□□□ 1.93
CCNC-214ENST00000523639 ZNF644Q9H582 1327 aaPredicted RBP27.12■■□□□ 1.93
CCNC-214ENST00000523639 SIGLEC1Q9BZZ2 1709 aa27.11■■□□□ 1.93
CCNC-214ENST00000523639 KIDINS220Q9ULH0 1771 aa27.1■■□□□ 1.93
CCNC-214ENST00000523639 MBD5Q9P267 1494 aa27.1■■□□□ 1.93
CCNC-214ENST00000523639 KANK4Q5T7N3 995 aaPredicted RBP27.09■■□□□ 1.93
CCNC-214ENST00000523639 ABCA6Q8N139 1617 aa27.08■■□□□ 1.93
CCNC-214ENST00000523639 RTEL1-TNFRSF6BF6WH68 1400 aa27.07■■□□□ 1.92
CCNC-214ENST00000523639 RIMS1Q86UR5 1692 aaKnown RBP27.05■■□□□ 1.92
CCNC-214ENST00000523639 ATP7AQ04656 1500 aa27.04■■□□□ 1.92
CCNC-214ENST00000523639 ESF1Q9H501 851 aaKnown RBP27.03■■□□□ 1.92
CCNC-214ENST00000523639 MIA2Q96PC5 1412 aa27.02■■□□□ 1.92
CCNC-214ENST00000523639 TSPY4P0CV99 314 aa27■■□□□ 1.91
CCNC-214ENST00000523639 TSPY10P0CW01 314 aa27■■□□□ 1.91
CCNC-214ENST00000523639 INO80Q9ULG1 1556 aaPredicted RBP27■■□□□ 1.91
CCNC-214ENST00000523639 CAMSAP2Q08AD1 1489 aa27■■□□□ 1.91
CCNC-214ENST00000523639 FER1L4A9Z1Z3 1794 aa26.99■■□□□ 1.91
CCNC-214ENST00000523639 PPP6R1Q9UPN7 881 aa26.99■■□□□ 1.91
CCNC-214ENST00000523639 A2MP01023 1474 aa26.99■■□□□ 1.91
CCNC-214ENST00000523639 CCDC141Q6ZP82 1450 aa26.99■■□□□ 1.91
CCNC-214ENST00000523639 MYOM3Q5VTT5 1437 aa26.97■■□□□ 1.91
CCNC-214ENST00000523639 CNTLNQ9NXG0 1405 aa26.97■■□□□ 1.91
CCNC-214ENST00000523639 DHX29Q7Z478 1369 aaKnown RBP26.94■■□□□ 1.9
CCNC-214ENST00000523639 ARHGEF5Q12774 1597 aa26.93■■□□□ 1.9
CCNC-214ENST00000523639 PLXNC1O60486 1568 aa26.92■■□□□ 1.9
CCNC-214ENST00000523639 PLPPR3Q6T4P5 718 aa26.91■■□□□ 1.9
CCNC-214ENST00000523639 LMTK3Q96Q04 1460 aa26.91■■□□□ 1.9
CCNC-214ENST00000523639 CEBPAP49715 358 aaPredicted RBP26.9■■□□□ 1.9
CCNC-214ENST00000523639 ADGBQ8N7X0 1667 aa26.89■■□□□ 1.89
CCNC-214ENST00000523639 SETD1BQ9UPS6 1966 aaKnown RBP26.84■■□□□ 1.89
CCNC-214ENST00000523639 GGT6Q6P531 493 aa26.84■■□□□ 1.89
CCNC-214ENST00000523639 ZMYM3Q14202 1370 aa26.82■■□□□ 1.88
CCNC-214ENST00000523639 MAST1Q9Y2H9 1570 aa26.79■■□□□ 1.88
CCNC-214ENST00000523639 KIF3BO15066 747 aa26.78■■□□□ 1.88
CCNC-214ENST00000523639 NPATQ14207 1427 aa26.78■■□□□ 1.88
CCNC-214ENST00000523639 MROH2AA6NES4 1674 aa26.77■■□□□ 1.88
CCNC-214ENST00000523639 UHRF1BP1Q6BDS2 1440 aa26.77■■□□□ 1.88
CCNC-214ENST00000523639 FGD6Q6ZV73 1430 aa26.76■■□□□ 1.87
CCNC-214ENST00000523639 C3P01024 1663 aa26.76■■□□□ 1.87
CCNC-214ENST00000523639 HSPA2P54652 639 aa26.75■■□□□ 1.87
CCNC-214ENST00000523639 PREX1Q8TCU6 1659 aa26.75■■□□□ 1.87
CCNC-214ENST00000523639 FAM135AQ9P2D6 1515 aa26.74■■□□□ 1.87
CCNC-214ENST00000523639 TCOF1Q13428 1488 aaKnown RBP26.73■■□□□ 1.87
CCNC-214ENST00000523639 PTPN23Q9H3S7 1636 aa26.71■■□□□ 1.87
CCNC-214ENST00000523639 SHANK2Q9UPX8 1470 aa26.7■■□□□ 1.87
CCNC-214ENST00000523639 ABCC5O15440 1437 aa26.7■■□□□ 1.86
CCNC-214ENST00000523639 DMRT2Q9Y5R5 561 aa26.69■■□□□ 1.86
CCNC-214ENST00000523639 WASHC2CQ9Y4E1 1318 aa26.68■■□□□ 1.86
CCNC-214ENST00000523639 DAPK1P53355 1430 aa26.65■■□□□ 1.86
CCNC-214ENST00000523639 CLTCQ00610 1675 aaKnown RBP26.65■■□□□ 1.86
CCNC-214ENST00000523639 PTPRKQ15262 1439 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms