RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
LINC00534-203ENST00000523406 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
LINC00534-203ENST00000523406 BOLA1Q9Y3E2 137 aa11.78□□□□□ -0.52
LINC00534-203ENST00000523406 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
LINC00534-203ENST00000523406 GPHNQ9NQX3 736 aaPredicted RBP11.77□□□□□ -0.53
LINC00534-203ENST00000523406 SLC39A7Q92504 469 aa11.76□□□□□ -0.53
LINC00534-203ENST00000523406 COLQQ9Y215 455 aaPredicted RBP11.76□□□□□ -0.53
LINC00534-203ENST00000523406 PRKCSHP14314 528 aaPredicted RBP11.75□□□□□ -0.53
LINC00534-203ENST00000523406 C7P10643 843 aa11.74□□□□□ -0.53
LINC00534-203ENST00000523406 POTEFA5A3E0 1075 aa11.73□□□□□ -0.53
LINC00534-203ENST00000523406 CAMK2BQ13554 666 aa11.73□□□□□ -0.53
LINC00534-203ENST00000523406 SEC24BO95487 1268 aa11.72□□□□□ -0.53
LINC00534-203ENST00000523406 TPRNQ4KMQ1 711 aa11.72□□□□□ -0.53
LINC00534-203ENST00000523406 L3MBTL3Q96JM7 780 aaPredicted RBP11.72□□□□□ -0.53
LINC00534-203ENST00000523406 PPP1R15BQ5SWA1 713 aa11.71□□□□□ -0.53
LINC00534-203ENST00000523406 ARIH1Q9Y4X5 557 aaPredicted RBP11.71□□□□□ -0.53
LINC00534-203ENST00000523406 G3V3G9 751 aa11.69□□□□□ -0.54
LINC00534-203ENST00000523406 KIF3CO14782 793 aa11.69□□□□□ -0.54
LINC00534-203ENST00000523406 METRNQ9UJH8 293 aa11.69□□□□□ -0.54
LINC00534-203ENST00000523406 DSG2Q14126 1118 aa11.68□□□□□ -0.54
LINC00534-203ENST00000523406 TMC2Q8TDI7 906 aa11.68□□□□□ -0.54
LINC00534-203ENST00000523406 FOXK1P85037 733 aa11.67□□□□□ -0.54
LINC00534-203ENST00000523406 C2orf72A6NCS6 295 aa11.65□□□□□ -0.54
LINC00534-203ENST00000523406 SHROOM4Q9ULL8 1493 aa11.64□□□□□ -0.55
LINC00534-203ENST00000523406 TMEM92Q6UXU6 159 aa11.63□□□□□ -0.55
LINC00534-203ENST00000523406 SEMA3EO15041 775 aa11.61□□□□□ -0.55
LINC00534-203ENST00000523406 TESPA1A2RU30 521 aaPredicted RBP11.6□□□□□ -0.55
LINC00534-203ENST00000523406 PLPP6Q8IY26 295 aa11.6□□□□□ -0.55
LINC00534-203ENST00000523406 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
LINC00534-203ENST00000523406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC00534-203ENST00000523406 DCAF1Q9Y4B6 1507 aa11.59□□□□□ -0.55
LINC00534-203ENST00000523406 LMOD2Q6P5Q4 547 aa11.55□□□□□ -0.56
LINC00534-203ENST00000523406 DPYSL4O14531 572 aa11.54□□□□□ -0.56
LINC00534-203ENST00000523406 ABCC9O60706 1549 aa11.54□□□□□ -0.56
LINC00534-203ENST00000523406 C3orf67Q6ZVT6 689 aa11.53□□□□□ -0.56
LINC00534-203ENST00000523406 TULP1O00294 542 aaPredicted RBP11.52□□□□□ -0.57
LINC00534-203ENST00000523406 PDIA6Q15084 440 aa11.51□□□□□ -0.57
LINC00534-203ENST00000523406 SPDYE16A6NNV3 312 aaPredicted RBP11.5□□□□□ -0.57
LINC00534-203ENST00000523406 SMYD5Q6GMV2 418 aa11.48□□□□□ -0.57
LINC00534-203ENST00000523406 OXER1Q8TDS5 423 aa11.47□□□□□ -0.57
LINC00534-203ENST00000523406 MLLT3P42568 568 aaPredicted RBP11.46□□□□□ -0.57
LINC00534-203ENST00000523406 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.46□□□□□ -0.57
LINC00534-203ENST00000523406 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
LINC00534-203ENST00000523406 POTEJP0CG39 1038 aa11.43□□□□□ -0.58
LINC00534-203ENST00000523406 UPF1Q92900 1129 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC00534-203ENST00000523406 MYO15BQ96JP2 1530 aa11.42□□□□□ -0.58
LINC00534-203ENST00000523406 POTEB2H3BUK9 544 aa11.41□□□□□ -0.58
LINC00534-203ENST00000523406 SLC34A2O95436 690 aa11.41□□□□□ -0.58
LINC00534-203ENST00000523406 PTCD2Q8WV60 388 aaKnown RBP11.41□□□□□ -0.58
LINC00534-203ENST00000523406 ZC3H15Q8WU90 426 aaKnown RBP11.4□□□□□ -0.58
LINC00534-203ENST00000523406 RBM26Q5T8P6 1007 aaKnown RBP11.37□□□□□ -0.59
LINC00534-203ENST00000523406 NACADO15069 1562 aa11.37□□□□□ -0.59
LINC00534-203ENST00000523406 TBC1D12O60347 775 aa11.36□□□□□ -0.59
LINC00534-203ENST00000523406 PTGER2P43116 358 aa11.36□□□□□ -0.59
LINC00534-203ENST00000523406 EVI5O60447 810 aa11.34□□□□□ -0.59
LINC00534-203ENST00000523406 GRXCR2A6NFK2 248 aa11.31□□□□□ -0.6
LINC00534-203ENST00000523406 ZMYND10O75800 440 aa11.31□□□□□ -0.6
LINC00534-203ENST00000523406 ANO8Q9HCE9 1232 aaPredicted RBP11.31□□□□□ -0.6
LINC00534-203ENST00000523406 GPIHBP1Q8IV16 184 aa11.3□□□□□ -0.6
LINC00534-203ENST00000523406 SUPT5HO00267 1087 aaKnown RBP11.29□□□□□ -0.6
LINC00534-203ENST00000523406 OSBPP22059 807 aa11.29□□□□□ -0.6
LINC00534-203ENST00000523406 MAMSTRQ6ZN01 415 aa11.29□□□□□ -0.6
LINC00534-203ENST00000523406 PCDHGA4Q9Y5G9 962 aa11.29□□□□□ -0.6
LINC00534-203ENST00000523406 DDX12PQ92771 950 aa11.28□□□□□ -0.6
LINC00534-203ENST00000523406 SCUBE2Q9NQ36 999 aa11.28□□□□□ -0.6
LINC00534-203ENST00000523406 BARGINQ6ZT62 677 aa11.27□□□□□ -0.61
LINC00534-203ENST00000523406 SLAIN1Q8ND83 568 aa11.27□□□□□ -0.61
LINC00534-203ENST00000523406 RB1CC1Q8TDY2 1594 aa11.26□□□□□ -0.61
LINC00534-203ENST00000523406 KDM4FA0A1W2PPD8 638 aa11.26□□□□□ -0.61
LINC00534-203ENST00000523406 ZNF316A6NFI3 1004 aaPredicted RBP11.26□□□□□ -0.61
LINC00534-203ENST00000523406 SCRIBQ14160 1630 aa11.26□□□□□ -0.61
LINC00534-203ENST00000523406 GPR37O15354 613 aa11.25□□□□□ -0.61
LINC00534-203ENST00000523406 HOXB3P14651 431 aaPredicted RBP11.25□□□□□ -0.61
LINC00534-203ENST00000523406 PRIM1P49642 420 aaKnown RBP11.23□□□□□ -0.61
LINC00534-203ENST00000523406 SLC24A3Q9HC58 644 aa11.23□□□□□ -0.61
LINC00534-203ENST00000523406 DOK7Q18PE1 504 aa11.22□□□□□ -0.61
LINC00534-203ENST00000523406 PHF14O94880 888 aa11.2□□□□□ -0.62
LINC00534-203ENST00000523406 ZSWIM6Q9HCJ5 1215 aa11.19□□□□□ -0.62
LINC00534-203ENST00000523406 NUTM2FA1L443 756 aa11.18□□□□□ -0.62
LINC00534-203ENST00000523406 EPAS1Q99814 870 aa11.18□□□□□ -0.62
LINC00534-203ENST00000523406 ARSIQ5FYB1 569 aa11.17□□□□□ -0.62
LINC00534-203ENST00000523406 GPR153Q6NV75 609 aa11.17□□□□□ -0.62
LINC00534-203ENST00000523406 PCDHGA10Q9Y5H3 936 aa11.17□□□□□ -0.62
LINC00534-203ENST00000523406 KHSRPQ92945 711 aaKnown RBP eCLIP11.16□□□□□ -0.621e-7■■□□□ 14.5
LINC00534-203ENST00000523406 JPH4Q96JJ6 628 aa11.16□□□□□ -0.62
LINC00534-203ENST00000523406 RIMBP2O15034 1052 aa11.15□□□□□ -0.62
LINC00534-203ENST00000523406 EN1Q05925 392 aaPredicted RBP11.15□□□□□ -0.62
LINC00534-203ENST00000523406 NUDT7P0C024 238 aa11.14□□□□□ -0.63
LINC00534-203ENST00000523406 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
LINC00534-203ENST00000523406 FCHSD2O94868 740 aa11.13□□□□□ -0.63
LINC00534-203ENST00000523406 FOSBP53539 338 aa11.13□□□□□ -0.63
LINC00534-203ENST00000523406 BRPF1P55201 1214 aaPredicted RBP11.13□□□□□ -0.63
LINC00534-203ENST00000523406 TYW1BQ6NUM6 668 aa11.13□□□□□ -0.63
LINC00534-203ENST00000523406 KRI1Q8N9T8 703 aaKnown RBP11.13□□□□□ -0.63
LINC00534-203ENST00000523406 AK7Q96M32 723 aa11.13□□□□□ -0.63
LINC00534-203ENST00000523406 PTGDRQ13258 359 aa11.12□□□□□ -0.63
LINC00534-203ENST00000523406 HIC1Q14526 733 aa11.12□□□□□ -0.63
LINC00534-203ENST00000523406 ZNF710Q8N1W2 664 aa11.12□□□□□ -0.63
LINC00534-203ENST00000523406 GNPATO15228 680 aa11.11□□□□□ -0.63
LINC00534-203ENST00000523406 FBXW7Q969H0 707 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms