RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	TAF3	Q5VWG9	929 aa		5.08	□□□□□ -1.6
FAM49B-225	ENST00000523288	TCERG1	O14776	1098 aa	Known RBP	5.07	□□□□□ -1.6
FAM49B-225	ENST00000523288	NBR1	Q14596	966 aa		5.07	□□□□□ -1.6
FAM49B-225	ENST00000523288	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
FAM49B-225	ENST00000523288	CCDC88B	A6NC98	1476 aa		5.07	□□□□□ -1.6
FAM49B-225	ENST00000523288	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	5.07	□□□□□ -1.6	3e-6	■■□□□ 12.9
FAM49B-225	ENST00000523288	BCL11B	Q9C0K0	894 aa	Predicted RBP	5.07	□□□□□ -1.6
FAM49B-225	ENST00000523288	ABCC8	Q09428	1581 aa		5.07	□□□□□ -1.6
FAM49B-225	ENST00000523288	BRPF3	Q9ULD4	1205 aa		5.07	□□□□□ -1.6
FAM49B-225	ENST00000523288	CLIP1	P30622	1438 aa		5.07	□□□□□ -1.6
FAM49B-225	ENST00000523288	TEX2	Q8IWB9	1127 aa		5.07	□□□□□ -1.6
FAM49B-225	ENST00000523288	KLHL34	Q8N239	644 aa		5.07	□□□□□ -1.6
FAM49B-225	ENST00000523288	ZBED9	Q6R2W3	1325 aa		5.07	□□□□□ -1.6
FAM49B-225	ENST00000523288	ISY1	Q9ULR0	285 aa	Known RBP	5.06	□□□□□ -1.6
FAM49B-225	ENST00000523288	FHAD1	B1AJZ9	1412 aa		5.06	□□□□□ -1.6
FAM49B-225	ENST00000523288	ANP32B	Q92688	251 aa	Known RBP	5.06	□□□□□ -1.6
FAM49B-225	ENST00000523288	INSR	P06213	1382 aa		5.05	□□□□□ -1.6
FAM49B-225	ENST00000523288	ATAD2B	Q9ULI0	1458 aa		5.05	□□□□□ -1.6
FAM49B-225	ENST00000523288	SLC20A2	Q08357	652 aa		5.04	□□□□□ -1.6
FAM49B-225	ENST00000523288	C14orf37	Q86TY3	774 aa		5.04	□□□□□ -1.6
FAM49B-225	ENST00000523288	KCNH8	Q96L42	1107 aa		5.04	□□□□□ -1.6
FAM49B-225	ENST00000523288	RTN4	Q9NQC3	1192 aa	Known RBP	5.04	□□□□□ -1.6
FAM49B-225	ENST00000523288	FRAT1	Q92837	279 aa	Predicted RBP	5.04	□□□□□ -1.6
FAM49B-225	ENST00000523288	CECR2	Q9BXF3	1484 aa		5.04	□□□□□ -1.6
FAM49B-225	ENST00000523288	PHLDB1	Q86UU1	1377 aa		5.04	□□□□□ -1.6
FAM49B-225	ENST00000523288	ANP32C	O43423	234 aa		5.04	□□□□□ -1.6
FAM49B-225	ENST00000523288	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.04	□□□□□ -1.6
FAM49B-225	ENST00000523288	LAMC3	Q9Y6N6	1575 aa		5.03	□□□□□ -1.6
FAM49B-225	ENST00000523288	GTF2E1	P29083	439 aa	Predicted RBP	5.03	□□□□□ -1.6
FAM49B-225	ENST00000523288	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
FAM49B-225	ENST00000523288	FBXO3	Q9UK99	471 aa		5.03	□□□□□ -1.6
FAM49B-225	ENST00000523288	IBTK	Q9P2D0	1353 aa	Predicted RBP	5.03	□□□□□ -1.6
FAM49B-225	ENST00000523288	GOLGA6L3	A6NEY3	463 aa		5.02	□□□□□ -1.61
FAM49B-225	ENST00000523288	RRAGD	Q9NQL2	400 aa	Predicted RBP	5.02	□□□□□ -1.61
FAM49B-225	ENST00000523288	DMTN	Q08495	405 aa		5.02	□□□□□ -1.61
FAM49B-225	ENST00000523288	STAC3	Q96MF2	364 aa		5.02	□□□□□ -1.61
FAM49B-225	ENST00000523288		E9PCH4	1651 aa		5.02	□□□□□ -1.61
FAM49B-225	ENST00000523288	ARAP1	Q96P48	1450 aa		5.02	□□□□□ -1.61
FAM49B-225	ENST00000523288	ZMYM3	Q14202	1370 aa		5.02	□□□□□ -1.61
FAM49B-225	ENST00000523288	KIF21A	Q7Z4S6	1674 aa		5.02	□□□□□ -1.61
FAM49B-225	ENST00000523288	FSD2	A1L4K1	749 aa		5.02	□□□□□ -1.61
FAM49B-225	ENST00000523288	FTSJ3	Q8IY81	847 aa	Known RBP	5.02	□□□□□ -1.61
FAM49B-225	ENST00000523288	GTPBP4	Q9BZE4	634 aa	Known RBP	5.02	□□□□□ -1.61
FAM49B-225	ENST00000523288	HECW1	Q76N89	1606 aa		5.02	□□□□□ -1.61
FAM49B-225	ENST00000523288	TARBP1	Q13395	1621 aa	Known RBP	5.01	□□□□□ -1.61
FAM49B-225	ENST00000523288	CNKSR2	Q8WXI2	1034 aa		5.01	□□□□□ -1.61
FAM49B-225	ENST00000523288	KIF20A	O95235	890 aa		5.01	□□□□□ -1.61
FAM49B-225	ENST00000523288	NFKBIB	Q15653	356 aa		5.01	□□□□□ -1.61
FAM49B-225	ENST00000523288	HSP90B1	P14625	803 aa	Known RBP	5.01	□□□□□ -1.61
FAM49B-225	ENST00000523288	CANX	P27824	592 aa	Known RBP	5.01	□□□□□ -1.61
FAM49B-225	ENST00000523288	MMP14	P50281	582 aa		5.01	□□□□□ -1.61
FAM49B-225	ENST00000523288	BACH2	Q9BYV9	841 aa		5.01	□□□□□ -1.61
FAM49B-225	ENST00000523288	GCC2	Q8IWJ2	1684 aa		5.01	□□□□□ -1.61
FAM49B-225	ENST00000523288	ERCC6	Q03468	1493 aa		5.01	□□□□□ -1.61
FAM49B-225	ENST00000523288	HAP1	P54257	671 aa	Predicted RBP	5.01	□□□□□ -1.61
FAM49B-225	ENST00000523288	CNTLN	Q9NXG0	1405 aa		5	□□□□□ -1.61
FAM49B-225	ENST00000523288	UHRF1BP1L	A0JNW5	1464 aa		5	□□□□□ -1.61
FAM49B-225	ENST00000523288	PNN	Q9H307	717 aa	Known RBP	5	□□□□□ -1.61
FAM49B-225	ENST00000523288	ARHGAP31	Q2M1Z3	1444 aa		5	□□□□□ -1.61
FAM49B-225	ENST00000523288	YEATS2	Q9ULM3	1422 aa		5	□□□□□ -1.61
FAM49B-225	ENST00000523288	SHROOM2	Q13796	1616 aa		5	□□□□□ -1.61
FAM49B-225	ENST00000523288	ZBTB7C	A1YPR0	619 aa		4.99	□□□□□ -1.61
FAM49B-225	ENST00000523288	WDR62	O43379	1518 aa		4.99	□□□□□ -1.61
FAM49B-225	ENST00000523288	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.99	□□□□□ -1.61
FAM49B-225	ENST00000523288	KIAA1107	Q9UPP5	1409 aa		4.99	□□□□□ -1.61
FAM49B-225	ENST00000523288	DCAF11	Q8TEB1	546 aa		4.99	□□□□□ -1.61
FAM49B-225	ENST00000523288	MYOM3	Q5VTT5	1437 aa		4.99	□□□□□ -1.61
FAM49B-225	ENST00000523288	LETM1	O95202	739 aa	Predicted RBP	4.99	□□□□□ -1.61
FAM49B-225	ENST00000523288	TOP2B	Q02880	1626 aa		4.98	□□□□□ -1.61
FAM49B-225	ENST00000523288	TIAM1	Q13009	1591 aa		4.98	□□□□□ -1.61
FAM49B-225	ENST00000523288		A0A0U1RQG5	324 aa	Predicted RBP	4.98	□□□□□ -1.61
FAM49B-225	ENST00000523288	YY1AP1	Q9H869	796 aa		4.98	□□□□□ -1.61
FAM49B-225	ENST00000523288	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.98	□□□□□ -1.61
FAM49B-225	ENST00000523288	LAS1L	Q9Y4W2	734 aa	Known RBP	4.98	□□□□□ -1.61
FAM49B-225	ENST00000523288	TSPY4	P0CV99	314 aa		4.97	□□□□□ -1.61
FAM49B-225	ENST00000523288	TSPY10	P0CW01	314 aa		4.97	□□□□□ -1.61
FAM49B-225	ENST00000523288	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.97	□□□□□ -1.61
FAM49B-225	ENST00000523288	BBX	Q8WY36	941 aa	Predicted RBP	4.97	□□□□□ -1.61
FAM49B-225	ENST00000523288	RNF216	Q9NWF9	866 aa	Predicted RBP	4.97	□□□□□ -1.61
FAM49B-225	ENST00000523288	SETD5	Q9C0A6	1442 aa		4.97	□□□□□ -1.61
FAM49B-225	ENST00000523288	CACNB1	Q02641	598 aa	Predicted RBP	4.97	□□□□□ -1.61
FAM49B-225	ENST00000523288	NPM2	Q86SE8	214 aa	Known RBP	4.97	□□□□□ -1.61
FAM49B-225	ENST00000523288	CFTR	P13569	1480 aa		4.96	□□□□□ -1.61
FAM49B-225	ENST00000523288	WDFY3	Q8IZQ1	3526 aa		4.96	□□□□□ -1.61
FAM49B-225	ENST00000523288	FAM193A	P78312	1265 aa		4.96	□□□□□ -1.61
FAM49B-225	ENST00000523288	HS1BP3	Q53T59	392 aa		4.96	□□□□□ -1.61
FAM49B-225	ENST00000523288	CHIC2	Q9UKJ5	165 aa		4.96	□□□□□ -1.62
FAM49B-225	ENST00000523288	PRX	Q9BXM0	1461 aa		4.96	□□□□□ -1.62
FAM49B-225	ENST00000523288	PDE4A	P27815	886 aa		4.96	□□□□□ -1.62
FAM49B-225	ENST00000523288	TMEM51	Q9NW97	253 aa		4.96	□□□□□ -1.62
FAM49B-225	ENST00000523288	TRIM44	Q96DX7	344 aa	Predicted RBP	4.96	□□□□□ -1.62
FAM49B-225	ENST00000523288	EP400	Q96L91	3159 aa		4.95	□□□□□ -1.62
FAM49B-225	ENST00000523288	PLEKHH2	Q8IVE3	1493 aa		4.95	□□□□□ -1.62
FAM49B-225	ENST00000523288	MLEC	Q14165	292 aa		4.95	□□□□□ -1.62
FAM49B-225	ENST00000523288	SOGA1	O94964	1423 aa		4.95	□□□□□ -1.62
FAM49B-225	ENST00000523288	NUDC	Q9Y266	331 aa		4.95	□□□□□ -1.62
FAM49B-225	ENST00000523288	CCDC18	Q5T9S5	1454 aa		4.95	□□□□□ -1.62
FAM49B-225	ENST00000523288	CFAP65	Q6ZU64	1925 aa	Known RBP	4.95	□□□□□ -1.62
FAM49B-225	ENST00000523288	KTN1	Q86UP2	1357 aa	Known RBP	4.95	□□□□□ -1.62
FAM49B-225	ENST00000523288	OFD1	O75665	1012 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms