RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 PCF11O94913 1555 aaKnown RBP13.04□□□□□ -0.32
GM2A-202ENST00000523004 ATP1B4Q9UN42 357 aaPredicted RBP13.04□□□□□ -0.32
GM2A-202ENST00000523004 SIGLEC1Q9BZZ2 1709 aa13.04□□□□□ -0.32
GM2A-202ENST00000523004 POGZQ7Z3K3 1410 aa13.04□□□□□ -0.32
GM2A-202ENST00000523004 EFCAB2Q5VUJ9 269 aa13.03□□□□□ -0.32
GM2A-202ENST00000523004 CDK11AQ9UQ88 783 aaPredicted RBP13.03□□□□□ -0.32
GM2A-202ENST00000523004 MYO5CQ9NQX4 1742 aa13.02□□□□□ -0.32
GM2A-202ENST00000523004 TROQ12816 1431 aaPredicted RBP13□□□□□ -0.33
GM2A-202ENST00000523004 KIF14Q15058 1648 aa12.99□□□□□ -0.33
GM2A-202ENST00000523004 FBXO41Q8TF61 875 aa12.99□□□□□ -0.33
GM2A-202ENST00000523004 ATP10AO60312 1499 aa12.98□□□□□ -0.33
GM2A-202ENST00000523004 LRRIQ1Q96JM4 1722 aa12.98□□□□□ -0.33
GM2A-202ENST00000523004 CLIP1P30622 1438 aa12.97□□□□□ -0.33
GM2A-202ENST00000523004 FER1L4A9Z1Z3 1794 aa12.97□□□□□ -0.33
GM2A-202ENST00000523004 MLECQ14165 292 aa12.97□□□□□ -0.33
GM2A-202ENST00000523004 ZNF518AQ6AHZ1 1483 aa12.97□□□□□ -0.33
GM2A-202ENST00000523004 C9orf84Q5VXU9 1444 aa12.96□□□□□ -0.33
GM2A-202ENST00000523004 ARHGEF12Q9NZN5 1544 aa12.96□□□□□ -0.33
GM2A-202ENST00000523004 KDM5CP41229 1560 aa12.95□□□□□ -0.34
GM2A-202ENST00000523004 ARHGAP5Q13017 1502 aa12.95□□□□□ -0.34
GM2A-202ENST00000523004 HSPA2P54652 639 aa12.95□□□□□ -0.34
GM2A-202ENST00000523004 CDC42BPBQ9Y5S2 1711 aa12.94□□□□□ -0.34
GM2A-202ENST00000523004 PLPPR3Q6T4P5 718 aa12.94□□□□□ -0.34
GM2A-202ENST00000523004 AFAP1Q8N556 730 aa12.94□□□□□ -0.34
GM2A-202ENST00000523004 CASKIN1Q8WXD9 1431 aa12.93□□□□□ -0.34
GM2A-202ENST00000523004 SENP3Q9H4L4 574 aaPredicted RBP12.92□□□□□ -0.34
GM2A-202ENST00000523004 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
GM2A-202ENST00000523004 SETD1BQ9UPS6 1966 aaKnown RBP12.91□□□□□ -0.34
GM2A-202ENST00000523004 MLH3Q9UHC1 1453 aa12.91□□□□□ -0.34
GM2A-202ENST00000523004 DIP2CQ9Y2E4 1556 aa12.9□□□□□ -0.34
GM2A-202ENST00000523004 PREX2Q70Z35 1606 aa12.9□□□□□ -0.34
GM2A-202ENST00000523004 REREQ9P2R6 1566 aa12.9□□□□□ -0.35
GM2A-202ENST00000523004 CEBPAP49715 358 aaPredicted RBP12.89□□□□□ -0.35
GM2A-202ENST00000523004 TRAPPC8Q9Y2L5 1435 aa12.88□□□□□ -0.35
GM2A-202ENST00000523004 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
GM2A-202ENST00000523004 PREX1Q8TCU6 1659 aa12.88□□□□□ -0.35
GM2A-202ENST00000523004 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
GM2A-202ENST00000523004 ABCC1P33527 1531 aa12.88□□□□□ -0.35
GM2A-202ENST00000523004 FYCO1Q9BQS8 1478 aa12.87□□□□□ -0.35
GM2A-202ENST00000523004 CDC42BPAQ5VT25 1732 aa12.87□□□□□ -0.35
GM2A-202ENST00000523004 ITSN2Q9NZM3 1697 aa12.86□□□□□ -0.35
GM2A-202ENST00000523004 AGLP35573 1532 aa12.86□□□□□ -0.35
GM2A-202ENST00000523004 KIDINS220Q9ULH0 1771 aa12.84□□□□□ -0.35
GM2A-202ENST00000523004 CERKQ8TCT0 537 aa12.83□□□□□ -0.36
GM2A-202ENST00000523004 STRCQ7RTU9 1775 aa12.82□□□□□ -0.36
GM2A-202ENST00000523004 UHRF1BP1Q6BDS2 1440 aa12.82□□□□□ -0.36
GM2A-202ENST00000523004 C3P01024 1663 aa12.82□□□□□ -0.36
GM2A-202ENST00000523004 GPATCH8Q9UKJ3 1502 aaKnown RBP12.82□□□□□ -0.36
GM2A-202ENST00000523004 SAMD9LQ8IVG5 1584 aa12.81□□□□□ -0.36
GM2A-202ENST00000523004 ZNF777Q9ULD5 760 aaPredicted RBP12.8□□□□□ -0.36
GM2A-202ENST00000523004 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
GM2A-202ENST00000523004 ESF1Q9H501 851 aaKnown RBP12.79□□□□□ -0.36
GM2A-202ENST00000523004 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
GM2A-202ENST00000523004 SYCP2Q9BX26 1530 aa12.78□□□□□ -0.36
GM2A-202ENST00000523004 HNRNPMP52272 730 aaKnown RBP eCLIP12.78□□□□□ -0.36
GM2A-202ENST00000523004 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
GM2A-202ENST00000523004 KIAA1107Q9UPP5 1409 aa12.78□□□□□ -0.36
GM2A-202ENST00000523004 CFDP1Q9UEE9 299 aaPredicted RBP12.77□□□□□ -0.37
GM2A-202ENST00000523004 PLEKHH2Q8IVE3 1493 aa12.76□□□□□ -0.37
GM2A-202ENST00000523004 MROH2AA6NES4 1674 aa12.75□□□□□ -0.37
GM2A-202ENST00000523004 PTPRTO14522 1441 aa12.75□□□□□ -0.37
GM2A-202ENST00000523004 ATP7AQ04656 1500 aa12.75□□□□□ -0.37
GM2A-202ENST00000523004 MTUS2Q5JR59 1369 aa12.75□□□□□ -0.37
GM2A-202ENST00000523004 CCNB3Q8WWL7 1395 aa12.75□□□□□ -0.37
GM2A-202ENST00000523004 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
GM2A-202ENST00000523004 INO80Q9ULG1 1556 aaPredicted RBP12.73□□□□□ -0.37
GM2A-202ENST00000523004 NPATQ14207 1427 aa12.73□□□□□ -0.37
GM2A-202ENST00000523004 ZMYM3Q14202 1370 aa12.73□□□□□ -0.37
GM2A-202ENST00000523004 PLXNC1O60486 1568 aa12.73□□□□□ -0.37
GM2A-202ENST00000523004 A2MP01023 1474 aa12.72□□□□□ -0.37
GM2A-202ENST00000523004 NCOA1Q15788 1441 aa12.71□□□□□ -0.37
GM2A-202ENST00000523004 ZNF644Q9H582 1327 aaPredicted RBP12.7□□□□□ -0.38
GM2A-202ENST00000523004 TIAM1Q13009 1591 aa12.7□□□□□ -0.38
GM2A-202ENST00000523004 EHBP1L1Q8N3D4 1523 aa12.69□□□□□ -0.38
GM2A-202ENST00000523004 MBD5Q9P267 1494 aa12.69□□□□□ -0.38
GM2A-202ENST00000523004 CLTCQ00610 1675 aaKnown RBP12.69□□□□□ -0.38
GM2A-202ENST00000523004 CEP162Q5TB80 1403 aa12.69□□□□□ -0.38
GM2A-202ENST00000523004 ADGBQ8N7X0 1667 aa12.68□□□□□ -0.38
GM2A-202ENST00000523004 GGT6Q6P531 493 aa12.68□□□□□ -0.38
GM2A-202ENST00000523004 PPP6R1Q9UPN7 881 aa12.68□□□□□ -0.38
GM2A-202ENST00000523004 CAMSAP1Q5T5Y3 1602 aa12.68□□□□□ -0.38
GM2A-202ENST00000523004 LTBP4Q8N2S1 1624 aa12.68□□□□□ -0.38
GM2A-202ENST00000523004 RTEL1-TNFRSF6BF6WH68 1400 aa12.67□□□□□ -0.38
GM2A-202ENST00000523004 PTPRKQ15262 1439 aa12.67□□□□□ -0.38
GM2A-202ENST00000523004 ZNF142P52746 1687 aaPredicted RBP12.65□□□□□ -0.38
GM2A-202ENST00000523004 MYO3AQ8NEV4 1616 aa12.64□□□□□ -0.39
GM2A-202ENST00000523004 DHX29Q7Z478 1369 aaKnown RBP12.64□□□□□ -0.39
GM2A-202ENST00000523004 IQSEC2Q5JU85 1478 aa12.64□□□□□ -0.39
GM2A-202ENST00000523004 NCKAP5LQ9HCH0 1330 aa12.63□□□□□ -0.39
GM2A-202ENST00000523004 PLA2R1Q13018 1463 aa12.63□□□□□ -0.39
GM2A-202ENST00000523004 CEP170BQ9Y4F5 1589 aaPredicted RBP12.63□□□□□ -0.39
GM2A-202ENST00000523004 NCOA2Q15596 1464 aa12.62□□□□□ -0.39
GM2A-202ENST00000523004 PKD2Q13563 968 aa12.62□□□□□ -0.39
GM2A-202ENST00000523004 RSPH4AQ5TD94 716 aa12.62□□□□□ -0.39
GM2A-202ENST00000523004 TCOF1Q13428 1488 aaKnown RBP12.61□□□□□ -0.39
GM2A-202ENST00000523004 CCDC141Q6ZP82 1450 aa12.61□□□□□ -0.39
GM2A-202ENST00000523004 CAMSAP2Q08AD1 1489 aa12.6□□□□□ -0.39
GM2A-202ENST00000523004 KIF3BO15066 747 aa12.59□□□□□ -0.39
GM2A-202ENST00000523004 ZNF335Q9H4Z2 1342 aaPredicted RBP12.59□□□□□ -0.39
GM2A-202ENST00000523004 A2ML1A8K2U0 1454 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms