RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 POGZQ7Z3K3 1410 aa30.09■■■□□ 2.41
SPIDR-220ENST00000522900 YEATS2Q9ULM3 1422 aa30.09■■■□□ 2.41
SPIDR-220ENST00000522900 ARHGAP5Q13017 1502 aa30.08■■■□□ 2.41
SPIDR-220ENST00000522900 ZMYM4Q5VZL5 1548 aa30.06■■■□□ 2.4
SPIDR-220ENST00000522900 ARHGEF40Q8TER5 1519 aa30.06■■■□□ 2.4
SPIDR-220ENST00000522900 AFAP1Q8N556 730 aa30.03■■■□□ 2.4
SPIDR-220ENST00000522900 ZFYVE16Q7Z3T8 1539 aa30.01■■■□□ 2.4
SPIDR-220ENST00000522900 MAGI2Q86UL8 1455 aa30.01■■■□□ 2.4
SPIDR-220ENST00000522900 CDC42BPBQ9Y5S2 1711 aa29.99■■■□□ 2.39
SPIDR-220ENST00000522900 ADAMTSL3P82987 1691 aa29.99■■■□□ 2.39
SPIDR-220ENST00000522900 BCORL1Q5H9F3 1711 aa29.96■■■□□ 2.39
SPIDR-220ENST00000522900 PREX2Q70Z35 1606 aa29.94■■■□□ 2.38
SPIDR-220ENST00000522900 ARHGEF12Q9NZN5 1544 aa29.94■■■□□ 2.38
SPIDR-220ENST00000522900 PTPRMP28827 1452 aa29.93■■■□□ 2.38
SPIDR-220ENST00000522900 ZNF518AQ6AHZ1 1483 aa29.93■■■□□ 2.38
SPIDR-220ENST00000522900 SIGLEC1Q9BZZ2 1709 aa29.93■■■□□ 2.38
SPIDR-220ENST00000522900 ZNF777Q9ULD5 760 aaPredicted RBP29.92■■■□□ 2.38
SPIDR-220ENST00000522900 GPATCH8Q9UKJ3 1502 aaKnown RBP29.91■■■□□ 2.38
SPIDR-220ENST00000522900 MTUS2Q5JR59 1369 aa29.91■■■□□ 2.38
SPIDR-220ENST00000522900 TRAPPC8Q9Y2L5 1435 aa29.91■■■□□ 2.38
SPIDR-220ENST00000522900 MLECQ14165 292 aa29.9■■■□□ 2.38
SPIDR-220ENST00000522900 ATP10AO60312 1499 aa29.9■■■□□ 2.38
SPIDR-220ENST00000522900 CDC42BPAQ5VT25 1732 aa29.89■■■□□ 2.38
SPIDR-220ENST00000522900 MYT1LQ9UL68 1186 aa29.89■■■□□ 2.38
SPIDR-220ENST00000522900 MADDQ8WXG6 1647 aa29.88■■■□□ 2.37
SPIDR-220ENST00000522900 ABCC1P33527 1531 aa29.87■■■□□ 2.37
SPIDR-220ENST00000522900 KDM5CP41229 1560 aa29.87■■■□□ 2.37
SPIDR-220ENST00000522900 HECW2Q9P2P5 1572 aa29.86■■■□□ 2.37
SPIDR-220ENST00000522900 CCNB3Q8WWL7 1395 aa29.85■■■□□ 2.37
SPIDR-220ENST00000522900 CFDP1Q9UEE9 299 aaPredicted RBP29.84■■■□□ 2.37
SPIDR-220ENST00000522900 C9orf84Q5VXU9 1444 aa29.84■■■□□ 2.37
SPIDR-220ENST00000522900 HNRNPMP52272 730 aaKnown RBP eCLIP29.82■■■□□ 2.366e-6■■□□□ 14.4
SPIDR-220ENST00000522900 MLH3Q9UHC1 1453 aa29.8■■■□□ 2.36
SPIDR-220ENST00000522900 SAMD9LQ8IVG5 1584 aa29.8■■■□□ 2.36
SPIDR-220ENST00000522900 ITSN2Q9NZM3 1697 aa29.79■■■□□ 2.36
SPIDR-220ENST00000522900 PLPPR3Q6T4P5 718 aa29.78■■■□□ 2.36
SPIDR-220ENST00000522900 RIMS1Q86UR5 1692 aaKnown RBP29.76■■■□□ 2.36
SPIDR-220ENST00000522900 VPS8Q8N3P4 1428 aa29.76■■■□□ 2.35
SPIDR-220ENST00000522900 DIP2CQ9Y2E4 1556 aa29.76■■■□□ 2.35
SPIDR-220ENST00000522900 EHBP1L1Q8N3D4 1523 aa29.76■■■□□ 2.35
SPIDR-220ENST00000522900 ZNF644Q9H582 1327 aaPredicted RBP29.74■■■□□ 2.35
SPIDR-220ENST00000522900 SYCP2Q9BX26 1530 aa29.74■■■□□ 2.35
SPIDR-220ENST00000522900 ABCA6Q8N139 1617 aa29.72■■■□□ 2.35
SPIDR-220ENST00000522900 KIAA1107Q9UPP5 1409 aa29.71■■■□□ 2.35
SPIDR-220ENST00000522900 TIAM1Q13009 1591 aa29.71■■■□□ 2.35
SPIDR-220ENST00000522900 SPAG9O60271 1321 aaKnown RBP29.69■■■□□ 2.34
SPIDR-220ENST00000522900 KIDINS220Q9ULH0 1771 aa29.67■■■□□ 2.34
SPIDR-220ENST00000522900 PLEKHH2Q8IVE3 1493 aa29.67■■■□□ 2.34
SPIDR-220ENST00000522900 NCOA2Q15596 1464 aa29.65■■■□□ 2.34
SPIDR-220ENST00000522900 REREQ9P2R6 1566 aa29.64■■■□□ 2.34
SPIDR-220ENST00000522900 CEBPAP49715 358 aaPredicted RBP29.63■■■□□ 2.33
SPIDR-220ENST00000522900 KANK4Q5T7N3 995 aaPredicted RBP29.63■■■□□ 2.33
SPIDR-220ENST00000522900 FER1L4A9Z1Z3 1794 aa29.62■■■□□ 2.33
SPIDR-220ENST00000522900 LMTK3Q96Q04 1460 aa29.6■■■□□ 2.33
SPIDR-220ENST00000522900 AGLP35573 1532 aa29.6■■■□□ 2.33
SPIDR-220ENST00000522900 LRRC9Q6ZRR7 1453 aa29.59■■■□□ 2.33
SPIDR-220ENST00000522900 MBD5Q9P267 1494 aa29.59■■■□□ 2.33
SPIDR-220ENST00000522900 SUPT6HQ7KZ85 1726 aaKnown RBP29.57■■■□□ 2.32
SPIDR-220ENST00000522900 ATP7AQ04656 1500 aa29.55■■■□□ 2.32
SPIDR-220ENST00000522900 HSPA2P54652 639 aa29.54■■■□□ 2.32
SPIDR-220ENST00000522900 INO80Q9ULG1 1556 aaPredicted RBP29.52■■■□□ 2.32
SPIDR-220ENST00000522900 MAP3K1Q13233 1512 aa29.51■■■□□ 2.32
SPIDR-220ENST00000522900 ESF1Q9H501 851 aaKnown RBP29.49■■■□□ 2.31
SPIDR-220ENST00000522900 A2MP01023 1474 aa29.48■■■□□ 2.31
SPIDR-220ENST00000522900 CAMSAP2Q08AD1 1489 aa29.48■■■□□ 2.31
SPIDR-220ENST00000522900 RTEL1-TNFRSF6BF6WH68 1400 aa29.44■■■□□ 2.3
SPIDR-220ENST00000522900 RSPH4AQ5TD94 716 aa29.42■■■□□ 2.3
SPIDR-220ENST00000522900 PLXNC1O60486 1568 aa29.42■■■□□ 2.3
SPIDR-220ENST00000522900 CCDC141Q6ZP82 1450 aa29.42■■■□□ 2.3
SPIDR-220ENST00000522900 GGT6Q6P531 493 aa29.41■■■□□ 2.3
SPIDR-220ENST00000522900 APLP2Q06481 763 aa29.4■■■□□ 2.3
SPIDR-220ENST00000522900 CNTLNQ9NXG0 1405 aa29.37■■■□□ 2.29
SPIDR-220ENST00000522900 DHX29Q7Z478 1369 aaKnown RBP29.37■■■□□ 2.29
SPIDR-220ENST00000522900 C3P01024 1663 aa29.36■■■□□ 2.29
SPIDR-220ENST00000522900 MYOM3Q5VTT5 1437 aa29.36■■■□□ 2.29
SPIDR-220ENST00000522900 ZMYM3Q14202 1370 aa29.35■■■□□ 2.29
SPIDR-220ENST00000522900 TSPY4P0CV99 314 aa29.34■■■□□ 2.29
SPIDR-220ENST00000522900 TSPY10P0CW01 314 aa29.34■■■□□ 2.29
SPIDR-220ENST00000522900 ILDR1Q86SU0 546 aaPredicted RBP29.34■■■□□ 2.29
SPIDR-220ENST00000522900 ADGBQ8N7X0 1667 aa29.33■■■□□ 2.29
SPIDR-220ENST00000522900 ARHGEF5Q12774 1597 aa29.32■■■□□ 2.28
SPIDR-220ENST00000522900 MIA2Q96PC5 1412 aa29.32■■■□□ 2.28
SPIDR-220ENST00000522900 PREX1Q8TCU6 1659 aa29.31■■■□□ 2.28
SPIDR-220ENST00000522900 UHRF1BP1Q6BDS2 1440 aa29.3■■■□□ 2.28
SPIDR-220ENST00000522900 KIF3BO15066 747 aa29.29■■■□□ 2.28
SPIDR-220ENST00000522900 PPP6R1Q9UPN7 881 aa29.26■■■□□ 2.27
SPIDR-220ENST00000522900 CLTCQ00610 1675 aaKnown RBP29.24■■■□□ 2.27
SPIDR-220ENST00000522900 SETD1BQ9UPS6 1966 aaKnown RBP29.23■■■□□ 2.27
SPIDR-220ENST00000522900 MROH2AA6NES4 1674 aa29.22■■■□□ 2.27
SPIDR-220ENST00000522900 NPATQ14207 1427 aa29.2■■■□□ 2.27
SPIDR-220ENST00000522900 PTPRKQ15262 1439 aa29.19■■■□□ 2.26
SPIDR-220ENST00000522900 MAST1Q9Y2H9 1570 aa29.17■■■□□ 2.26
SPIDR-220ENST00000522900 ABCC5O15440 1437 aa29.14■■■□□ 2.26
SPIDR-220ENST00000522900 FGD6Q6ZV73 1430 aa29.14■■■□□ 2.26
SPIDR-220ENST00000522900 PTPN23Q9H3S7 1636 aa29.13■■■□□ 2.25
SPIDR-220ENST00000522900 WASHC2CQ9Y4E1 1318 aa29.13■■■□□ 2.25
SPIDR-220ENST00000522900 STRCQ7RTU9 1775 aa29.11■■■□□ 2.25
SPIDR-220ENST00000522900 FBXO31Q5XUX0 539 aaPredicted RBP29.11■■■□□ 2.25
SPIDR-220ENST00000522900 TCOF1Q13428 1488 aaKnown RBP29.09■■■□□ 2.25
SPIDR-220ENST00000522900 RRP7BPQ9NSQ0 103 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms