RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	CABP2	Q9NPB3	220 aa		12.91	□□□□□ -0.34
EIF3E-216	ENST00000522887	ZNF710	Q8N1W2	664 aa		12.9	□□□□□ -0.34
EIF3E-216	ENST00000522887	POTEB3	A0JP26	581 aa		12.87	□□□□□ -0.35
EIF3E-216	ENST00000522887	POTEB	Q6S5H4	581 aa		12.87	□□□□□ -0.35
EIF3E-216	ENST00000522887	NLRP6	P59044	892 aa		12.86	□□□□□ -0.35
EIF3E-216	ENST00000522887	SPRYD3	Q8NCJ5	442 aa		12.86	□□□□□ -0.35
EIF3E-216	ENST00000522887	PLCB2	Q00722	1185 aa		12.85	□□□□□ -0.35
EIF3E-216	ENST00000522887	NKX1-1	Q15270	411 aa	Predicted RBP	12.84	□□□□□ -0.35
EIF3E-216	ENST00000522887	EFCAB3	Q8N7B9	438 aa		12.84	□□□□□ -0.35
EIF3E-216	ENST00000522887	ILDR1	Q86SU0	546 aa	Predicted RBP	12.83	□□□□□ -0.36
EIF3E-216	ENST00000522887	ERBB3	P21860	1342 aa		12.83	□□□□□ -0.36
EIF3E-216	ENST00000522887	RNF166	Q96A37	237 aa	Predicted RBP	12.82	□□□□□ -0.36
EIF3E-216	ENST00000522887	DOK7	Q18PE1	504 aa		12.8	□□□□□ -0.36
EIF3E-216	ENST00000522887	MFRP	Q9BY79	579 aa		12.8	□□□□□ -0.36
EIF3E-216	ENST00000522887	RIMBP2	O15034	1052 aa		12.79	□□□□□ -0.36
EIF3E-216	ENST00000522887	GTPBP6	O43824	516 aa	Predicted RBP	12.79	□□□□□ -0.36
EIF3E-216	ENST00000522887	FBXO22	Q8NEZ5	403 aa		12.78	□□□□□ -0.36
EIF3E-216	ENST00000522887	BOLA1	Q9Y3E2	137 aa		12.78	□□□□□ -0.36
EIF3E-216	ENST00000522887	CCDC180	Q9P1Z9	1646 aa		12.77	□□□□□ -0.36
EIF3E-216	ENST00000522887	HOXB1	P14653	301 aa	Predicted RBP	12.76	□□□□□ -0.37
EIF3E-216	ENST00000522887	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.76	□□□□□ -0.37
EIF3E-216	ENST00000522887	MYT1L	Q9UL68	1186 aa		12.73	□□□□□ -0.37
EIF3E-216	ENST00000522887	PHF8	Q9UPP1	1060 aa		12.73	□□□□□ -0.37
EIF3E-216	ENST00000522887	HOXB3	P14651	431 aa	Predicted RBP	12.72	□□□□□ -0.37
EIF3E-216	ENST00000522887	DPY19L2	Q6NUT2	758 aa		12.71	□□□□□ -0.37
EIF3E-216	ENST00000522887	CFAP44	Q96MT7	982 aa		12.71	□□□□□ -0.37
EIF3E-216	ENST00000522887	VARS2	Q5ST30	1063 aa	Known RBP	12.68	□□□□□ -0.38
EIF3E-216	ENST00000522887	MS4A4A	Q96JQ5	239 aa		12.66	□□□□□ -0.38
EIF3E-216	ENST00000522887	PTGER2	P43116	358 aa		12.65	□□□□□ -0.38
EIF3E-216	ENST00000522887	SLC24A1	O60721	1099 aa		12.63	□□□□□ -0.39
EIF3E-216	ENST00000522887	ZSWIM6	Q9HCJ5	1215 aa		12.59	□□□□□ -0.39
EIF3E-216	ENST00000522887	ZNF687	Q8N1G0	1237 aa		12.57	□□□□□ -0.4
EIF3E-216	ENST00000522887	HAP1	P54257	671 aa	Predicted RBP	12.56	□□□□□ -0.4
EIF3E-216	ENST00000522887	VSIG10	Q8N0Z9	540 aa		12.54	□□□□□ -0.4
EIF3E-216	ENST00000522887	PPP1R37	O75864	691 aa		12.53	□□□□□ -0.4
EIF3E-216	ENST00000522887	MICALL2	Q8IY33	904 aa		12.52	□□□□□ -0.41
EIF3E-216	ENST00000522887	ANKRD13D	Q6ZTN6	518 aa		12.5	□□□□□ -0.41
EIF3E-216	ENST00000522887	TSHZ2	Q9NRE2	1034 aa		12.48	□□□□□ -0.41
EIF3E-216	ENST00000522887	PDE4A	P27815	886 aa		12.42	□□□□□ -0.42
EIF3E-216	ENST00000522887	GPR153	Q6NV75	609 aa		12.41	□□□□□ -0.42
EIF3E-216	ENST00000522887	CRISPLD2	Q9H0B8	497 aa		12.41	□□□□□ -0.42
EIF3E-216	ENST00000522887	MFSD10	Q14728	455 aa		12.38	□□□□□ -0.43
EIF3E-216	ENST00000522887	GPHN	Q9NQX3	736 aa	Predicted RBP	12.38	□□□□□ -0.43
EIF3E-216	ENST00000522887	TMC2	Q8TDI7	906 aa		12.37	□□□□□ -0.43
EIF3E-216	ENST00000522887	LSM11	P83369	360 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
EIF3E-216	ENST00000522887	ARSI	Q5FYB1	569 aa		12.36	□□□□□ -0.43
EIF3E-216	ENST00000522887	CADPS2	Q86UW7	1296 aa		12.36	□□□□□ -0.43
EIF3E-216	ENST00000522887	WDR70	Q9NW82	654 aa		12.35	□□□□□ -0.43
EIF3E-216	ENST00000522887	NCKAP5L	Q9HCH0	1330 aa		12.35	□□□□□ -0.43
EIF3E-216	ENST00000522887	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.34	□□□□□ -0.43
EIF3E-216	ENST00000522887	KIF3C	O14782	793 aa		12.34	□□□□□ -0.43
EIF3E-216	ENST00000522887	TMEM92	Q6UXU6	159 aa		12.34	□□□□□ -0.43
EIF3E-216	ENST00000522887	PLA2G2E	Q9NZK7	142 aa		12.34	□□□□□ -0.43
EIF3E-216	ENST00000522887	FOXK1	P85037	733 aa		12.31	□□□□□ -0.44
EIF3E-216	ENST00000522887	P3H3	Q8IVL6	736 aa		12.31	□□□□□ -0.44
EIF3E-216	ENST00000522887	DDX27	Q96GQ7	796 aa	Known RBP	12.31	□□□□□ -0.44
EIF3E-216	ENST00000522887	PBX2	P40425	430 aa		12.29	□□□□□ -0.44
EIF3E-216	ENST00000522887	LARP6	Q9BRS8	491 aa	Known RBP	12.29	□□□□□ -0.44
EIF3E-216	ENST00000522887	HCST	Q9UBK5	93 aa		12.29	□□□□□ -0.44
EIF3E-216	ENST00000522887	KDM2A	Q9Y2K7	1162 aa		12.29	□□□□□ -0.44
EIF3E-216	ENST00000522887	C2orf72	A6NCS6	295 aa		12.27	□□□□□ -0.45
EIF3E-216	ENST00000522887	RB1CC1	Q8TDY2	1594 aa		12.26	□□□□□ -0.45
EIF3E-216	ENST00000522887	PPP1R15B	Q5SWA1	713 aa		12.26	□□□□□ -0.45
EIF3E-216	ENST00000522887	CAMK2B	Q13554	666 aa		12.23	□□□□□ -0.45
EIF3E-216	ENST00000522887	E2F4	Q16254	413 aa		12.22	□□□□□ -0.45
EIF3E-216	ENST00000522887	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.22	□□□□□ -0.45	2e-8	■■■□□ 17.5
EIF3E-216	ENST00000522887	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.22	□□□□□ -0.45
EIF3E-216	ENST00000522887	DSG2	Q14126	1118 aa		12.21	□□□□□ -0.45
EIF3E-216	ENST00000522887	SLC34A2	O95436	690 aa		12.18	□□□□□ -0.46
EIF3E-216	ENST00000522887	PLPP6	Q8IY26	295 aa		12.18	□□□□□ -0.46
EIF3E-216	ENST00000522887	ARHGEF1	Q92888	912 aa	Known RBP	12.17	□□□□□ -0.46
EIF3E-216	ENST00000522887	NACAD	O15069	1562 aa		12.17	□□□□□ -0.46
EIF3E-216	ENST00000522887	NUDT7	P0C024	238 aa		12.16	□□□□□ -0.46
EIF3E-216	ENST00000522887	AXIN2	Q9Y2T1	843 aa		12.13	□□□□□ -0.47
EIF3E-216	ENST00000522887	TBC1D12	O60347	775 aa		12.1	□□□□□ -0.47
EIF3E-216	ENST00000522887	KCNV2	Q8TDN2	545 aa		12.1	□□□□□ -0.47
EIF3E-216	ENST00000522887	PTCD2	Q8WV60	388 aa	Known RBP	12.1	□□□□□ -0.47
EIF3E-216	ENST00000522887	STAC3	Q96MF2	364 aa		12.1	□□□□□ -0.47
EIF3E-216	ENST00000522887	LHX6	Q9UPM6	363 aa		12.1	□□□□□ -0.47
EIF3E-216	ENST00000522887	ADGRD1	Q6QNK2	874 aa		12.09	□□□□□ -0.47
EIF3E-216	ENST00000522887	PSD	A5PKW4	1024 aa	Predicted RBP	12.08	□□□□□ -0.48
EIF3E-216	ENST00000522887	OXER1	Q8TDS5	423 aa		12.08	□□□□□ -0.48
EIF3E-216	ENST00000522887	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.07	□□□□□ -0.48
EIF3E-216	ENST00000522887	ARHGAP33	O14559	1287 aa		12.06	□□□□□ -0.48
EIF3E-216	ENST00000522887	PCDHGA4	Q9Y5G9	962 aa		12.05	□□□□□ -0.48
EIF3E-216	ENST00000522887	BCAN	Q96GW7	911 aa		12.03	□□□□□ -0.48
EIF3E-216	ENST00000522887	EMILIN3	Q9NT22	766 aa		12.03	□□□□□ -0.48
EIF3E-216	ENST00000522887	NBR1	Q14596	966 aa		12.02	□□□□□ -0.49
EIF3E-216	ENST00000522887	PDIA6	Q15084	440 aa		12.01	□□□□□ -0.49
EIF3E-216	ENST00000522887	POTEE	Q6S8J3	1075 aa		12.01	□□□□□ -0.49
EIF3E-216	ENST00000522887	TK2	O00142	265 aa		12	□□□□□ -0.49
EIF3E-216	ENST00000522887	MAP3K9	P80192	1104 aa		12	□□□□□ -0.49
EIF3E-216	ENST00000522887	KCNH8	Q96L42	1107 aa		11.99	□□□□□ -0.49
EIF3E-216	ENST00000522887	KCTD12	Q96CX2	325 aa	Known RBP	11.98	□□□□□ -0.49
EIF3E-216	ENST00000522887	DPYSL4	O14531	572 aa		11.96	□□□□□ -0.49
EIF3E-216	ENST00000522887	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.95	□□□□□ -0.5
EIF3E-216	ENST00000522887	RGS20	O76081	388 aa		11.94	□□□□□ -0.5
EIF3E-216	ENST00000522887	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
EIF3E-216	ENST00000522887	IRX2	Q9BZI1	471 aa	Predicted RBP	11.94	□□□□□ -0.5
EIF3E-216	ENST00000522887	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms