RNA–Protein interactions for RNA: ENST00000522880.1

SFTPC-208, Transcript of surfactant protein C, humanhuman

TSL 3

Gene SFTPC, Length 1,000 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-208ENST00000522880 NCOA2Q15596 1464 aa23.07■■□□□ 1.28
SFTPC-208ENST00000522880 SUPT6HQ7KZ85 1726 aaKnown RBP23.07■■□□□ 1.28
SFTPC-208ENST00000522880 CFAP74Q9C0B2 1584 aa23.06■■□□□ 1.28
SFTPC-208ENST00000522880 ARHGAP5Q13017 1502 aa23.05■■□□□ 1.28
SFTPC-208ENST00000522880 GPATCH8Q9UKJ3 1502 aaKnown RBP23.05■■□□□ 1.28
SFTPC-208ENST00000522880 AKNAQ7Z591 1439 aa23.03■■□□□ 1.28
SFTPC-208ENST00000522880 PREX2Q70Z35 1606 aa23.03■■□□□ 1.28
SFTPC-208ENST00000522880 CFDP1Q9UEE9 299 aaPredicted RBP23.01■■□□□ 1.27
SFTPC-208ENST00000522880 CDC42BPAQ5VT25 1732 aa22.99■■□□□ 1.27
SFTPC-208ENST00000522880 ADGRL1O94910 1474 aa22.98■■□□□ 1.27
SFTPC-208ENST00000522880 COL17A1Q9UMD9 1497 aaPredicted RBP22.98■■□□□ 1.27
SFTPC-208ENST00000522880 ITSN2Q9NZM3 1697 aa22.97■■□□□ 1.27
SFTPC-208ENST00000522880 CDC42BPBQ9Y5S2 1711 aa22.96■■□□□ 1.27
SFTPC-208ENST00000522880 DENND4BO75064 1496 aaPredicted RBP22.95■■□□□ 1.26
SFTPC-208ENST00000522880 SCAPERQ9BY12 1400 aa22.94■■□□□ 1.26
SFTPC-208ENST00000522880 ZNF777Q9ULD5 760 aaPredicted RBP22.94■■□□□ 1.26
SFTPC-208ENST00000522880 MYOM3Q5VTT5 1437 aa22.92■■□□□ 1.26
SFTPC-208ENST00000522880 PLEKHH2Q8IVE3 1493 aa22.92■■□□□ 1.26
SFTPC-208ENST00000522880 MIA2Q96PC5 1412 aa22.91■■□□□ 1.26
SFTPC-208ENST00000522880 RAPGEF3O95398 923 aa22.9■■□□□ 1.26
SFTPC-208ENST00000522880 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.26
SFTPC-208ENST00000522880 ABCC1P33527 1531 aa22.89■■□□□ 1.26
SFTPC-208ENST00000522880 POGZQ7Z3K3 1410 aa22.89■■□□□ 1.25
SFTPC-208ENST00000522880 KIAA1107Q9UPP5 1409 aa22.89■■□□□ 1.25
SFTPC-208ENST00000522880 SAMD9LQ8IVG5 1584 aa22.88■■□□□ 1.25
SFTPC-208ENST00000522880 ZNF518AQ6AHZ1 1483 aa22.85■■□□□ 1.25
SFTPC-208ENST00000522880 FRMPD1Q5SYB0 1578 aa22.84■■□□□ 1.25
SFTPC-208ENST00000522880 ZNF644Q9H582 1327 aaPredicted RBP22.83■■□□□ 1.25
SFTPC-208ENST00000522880 CAMSAP2Q08AD1 1489 aa22.83■■□□□ 1.25
SFTPC-208ENST00000522880 SYCP2Q9BX26 1530 aa22.82■■□□□ 1.24
SFTPC-208ENST00000522880 ARHGEF12Q9NZN5 1544 aa22.82■■□□□ 1.24
SFTPC-208ENST00000522880 PPARGC1BQ86YN6 1023 aaKnown RBP22.82■■□□□ 1.24
SFTPC-208ENST00000522880 RICTORQ6R327 1708 aa22.82■■□□□ 1.24
SFTPC-208ENST00000522880 FGD6Q6ZV73 1430 aa22.82■■□□□ 1.24
SFTPC-208ENST00000522880 HNRNPMP52272 730 aaKnown RBP eCLIP22.81■■□□□ 1.24
SFTPC-208ENST00000522880 TRAPPC8Q9Y2L5 1435 aa22.81■■□□□ 1.24
SFTPC-208ENST00000522880 RSPH4AQ5TD94 716 aa22.8■■□□□ 1.24
SFTPC-208ENST00000522880 AFAP1Q8N556 730 aa22.8■■□□□ 1.24
SFTPC-208ENST00000522880 ZMYM4Q5VZL5 1548 aa22.8■■□□□ 1.24
SFTPC-208ENST00000522880 MAGI2Q86UL8 1455 aa22.79■■□□□ 1.24
SFTPC-208ENST00000522880 KDM5CP41229 1560 aa22.78■■□□□ 1.24
SFTPC-208ENST00000522880 MBD5Q9P267 1494 aa22.78■■□□□ 1.24
SFTPC-208ENST00000522880 TCOF1Q13428 1488 aaKnown RBP22.74■■□□□ 1.23
SFTPC-208ENST00000522880 PTPN23Q9H3S7 1636 aa22.74■■□□□ 1.23
SFTPC-208ENST00000522880 CCDC141Q6ZP82 1450 aa22.73■■□□□ 1.23
SFTPC-208ENST00000522880 MLH3Q9UHC1 1453 aa22.73■■□□□ 1.23
SFTPC-208ENST00000522880 MYT1LQ9UL68 1186 aa22.73■■□□□ 1.23
SFTPC-208ENST00000522880 SPAG9O60271 1321 aaKnown RBP22.73■■□□□ 1.23
SFTPC-208ENST00000522880 ZFYVE16Q7Z3T8 1539 aa22.72■■□□□ 1.23
SFTPC-208ENST00000522880 ARHGEF5Q12774 1597 aa22.72■■□□□ 1.23
SFTPC-208ENST00000522880 ARHGEF40Q8TER5 1519 aa22.7■■□□□ 1.22
SFTPC-208ENST00000522880 TSPY4P0CV99 314 aa22.69■■□□□ 1.22
SFTPC-208ENST00000522880 TSPY10P0CW01 314 aa22.69■■□□□ 1.22
SFTPC-208ENST00000522880 YEATS2Q9ULM3 1422 aa22.68■■□□□ 1.22
SFTPC-208ENST00000522880 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
SFTPC-208ENST00000522880 RTEL1-TNFRSF6BF6WH68 1400 aa22.66■■□□□ 1.22
SFTPC-208ENST00000522880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.64■■□□□ 1.22
SFTPC-208ENST00000522880 ATP7AQ04656 1500 aa22.64■■□□□ 1.21
SFTPC-208ENST00000522880 ATP10AO60312 1499 aa22.64■■□□□ 1.21
SFTPC-208ENST00000522880 RRBP1Q9P2E9 1410 aaKnown RBP22.63■■□□□ 1.21
SFTPC-208ENST00000522880 INO80Q9ULG1 1556 aaPredicted RBP22.63■■□□□ 1.21
SFTPC-208ENST00000522880 ABCC5O15440 1437 aa22.62■■□□□ 1.21
SFTPC-208ENST00000522880 DAPK1P53355 1430 aa22.62■■□□□ 1.21
SFTPC-208ENST00000522880 C9orf84Q5VXU9 1444 aa22.62■■□□□ 1.21
SFTPC-208ENST00000522880 SHANK2Q9UPX8 1470 aa22.61■■□□□ 1.21
SFTPC-208ENST00000522880 KIDINS220Q9ULH0 1771 aa22.61■■□□□ 1.21
SFTPC-208ENST00000522880 DIP2CQ9Y2E4 1556 aa22.6■■□□□ 1.21
SFTPC-208ENST00000522880 DNMT1P26358 1616 aaKnown RBP22.6■■□□□ 1.21
SFTPC-208ENST00000522880 MAST1Q9Y2H9 1570 aa22.59■■□□□ 1.21
SFTPC-208ENST00000522880 ABCA6Q8N139 1617 aa22.58■■□□□ 1.21
SFTPC-208ENST00000522880 REREQ9P2R6 1566 aa22.57■■□□□ 1.2
SFTPC-208ENST00000522880 ARID4BQ4LE39 1312 aaPredicted RBP22.57■■□□□ 1.2
SFTPC-208ENST00000522880 A2MP01023 1474 aa22.54■■□□□ 1.2
SFTPC-208ENST00000522880 CROCC2H7BZ55 1655 aa22.53■■□□□ 1.2
SFTPC-208ENST00000522880 ANKRD30AQ9BXX3 1397 aa22.5■■□□□ 1.19
SFTPC-208ENST00000522880 AGLP35573 1532 aa22.5■■□□□ 1.19
SFTPC-208ENST00000522880 PLXNC1O60486 1568 aa22.5■■□□□ 1.19
SFTPC-208ENST00000522880 DHX29Q7Z478 1369 aaKnown RBP22.5■■□□□ 1.19
SFTPC-208ENST00000522880 ADGBQ8N7X0 1667 aa22.49■■□□□ 1.19
SFTPC-208ENST00000522880 CHIC2Q9UKJ5 165 aa22.48■■□□□ 1.19
SFTPC-208ENST00000522880 ADGRL2O95490 1459 aa22.47■■□□□ 1.19
SFTPC-208ENST00000522880 KIF15Q9NS87 1388 aa22.47■■□□□ 1.19
SFTPC-208ENST00000522880 ITGAEP38570 1179 aa22.46■■□□□ 1.19
SFTPC-208ENST00000522880 FBXO41Q8TF61 875 aa22.46■■□□□ 1.19
SFTPC-208ENST00000522880 NCOA1Q15788 1441 aa22.46■■□□□ 1.19
SFTPC-208ENST00000522880 RRP7BPQ9NSQ0 103 aa22.45■■□□□ 1.18
SFTPC-208ENST00000522880 ROCK1Q13464 1354 aa22.45■■□□□ 1.18
SFTPC-208ENST00000522880 PTPRKQ15262 1439 aa22.45■■□□□ 1.18
SFTPC-208ENST00000522880 DUOX2Q9NRD8 1548 aa22.44■■□□□ 1.18
SFTPC-208ENST00000522880 SIGLEC1Q9BZZ2 1709 aa22.43■■□□□ 1.18
SFTPC-208ENST00000522880 BCORL1Q5H9F3 1711 aa22.41■■□□□ 1.18
SFTPC-208ENST00000522880 MLECQ14165 292 aa22.41■■□□□ 1.18
SFTPC-208ENST00000522880 ERBINQ96RT1 1412 aa22.4■■□□□ 1.18
SFTPC-208ENST00000522880 KIF3BO15066 747 aa22.38■■□□□ 1.17
SFTPC-208ENST00000522880 PPP6R1Q9UPN7 881 aa22.36■■□□□ 1.17
SFTPC-208ENST00000522880 ADAMTSL3P82987 1691 aa22.36■■□□□ 1.17
SFTPC-208ENST00000522880 GGT6Q6P531 493 aa22.35■■□□□ 1.17
SFTPC-208ENST00000522880 EIF2AK4Q9P2K8 1649 aaKnown RBP22.35■■□□□ 1.17
SFTPC-208ENST00000522880 PTPRMP28827 1452 aa22.34■■□□□ 1.17
SFTPC-208ENST00000522880 ANKRD50Q9ULJ7 1429 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms