RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 PCF11O94913 1555 aaKnown RBP35.08■■■■□ 3.21
HOXA3-205ENST00000522456 MAGI2Q86UL8 1455 aa35.08■■■■□ 3.21
HOXA3-205ENST00000522456 YEATS2Q9ULM3 1422 aa35.07■■■■□ 3.21
HOXA3-205ENST00000522456 RIMS1Q86UR5 1692 aaKnown RBP35.07■■■■□ 3.2
HOXA3-205ENST00000522456 POGZQ7Z3K3 1410 aa35.06■■■■□ 3.2
HOXA3-205ENST00000522456 MYO5CQ9NQX4 1742 aa35.05■■■■□ 3.2
HOXA3-205ENST00000522456 SCAPERQ9BY12 1400 aa35.05■■■■□ 3.2
HOXA3-205ENST00000522456 CCDC18Q5T9S5 1454 aa35.04■■■■□ 3.2
HOXA3-205ENST00000522456 FYCO1Q9BQS8 1478 aa35.03■■■■□ 3.2
HOXA3-205ENST00000522456 SIGLEC1Q9BZZ2 1709 aa35.01■■■■□ 3.2
HOXA3-205ENST00000522456 KIF14Q15058 1648 aa35.01■■■■□ 3.19
HOXA3-205ENST00000522456 LRRIQ1Q96JM4 1722 aa35.01■■■■□ 3.19
HOXA3-205ENST00000522456 TROQ12816 1431 aaPredicted RBP34.98■■■■□ 3.19
HOXA3-205ENST00000522456 LMTK3Q96Q04 1460 aa34.97■■■■□ 3.19
HOXA3-205ENST00000522456 EFCAB2Q5VUJ9 269 aa34.96■■■■□ 3.19
HOXA3-205ENST00000522456 ARHGAP5Q13017 1502 aa34.9■■■■□ 3.18
HOXA3-205ENST00000522456 ATP10AO60312 1499 aa34.87■■■■□ 3.17
HOXA3-205ENST00000522456 FER1L4A9Z1Z3 1794 aa34.87■■■■□ 3.17
HOXA3-205ENST00000522456 ZNF518AQ6AHZ1 1483 aa34.86■■■■□ 3.17
HOXA3-205ENST00000522456 MLECQ14165 292 aa34.86■■■■□ 3.17
HOXA3-205ENST00000522456 C9orf84Q5VXU9 1444 aa34.86■■■■□ 3.17
HOXA3-205ENST00000522456 PLPPR3Q6T4P5 718 aa34.84■■■■□ 3.17
HOXA3-205ENST00000522456 KDM5CP41229 1560 aa34.81■■■■□ 3.16
HOXA3-205ENST00000522456 ARHGEF12Q9NZN5 1544 aa34.8■■■■□ 3.16
HOXA3-205ENST00000522456 CDC42BPBQ9Y5S2 1711 aa34.76■■■■□ 3.16
HOXA3-205ENST00000522456 AFAP1Q8N556 730 aa34.75■■■■□ 3.15
HOXA3-205ENST00000522456 FBXO41Q8TF61 875 aa34.75■■■■□ 3.15
HOXA3-205ENST00000522456 PREX2Q70Z35 1606 aa34.74■■■■□ 3.15
HOXA3-205ENST00000522456 HSPA2P54652 639 aa34.73■■■■□ 3.15
HOXA3-205ENST00000522456 VPS8Q8N3P4 1428 aa34.7■■■■□ 3.15
HOXA3-205ENST00000522456 DIP2CQ9Y2E4 1556 aa34.7■■■■□ 3.14
HOXA3-205ENST00000522456 ABCC1P33527 1531 aa34.69■■■■□ 3.14
HOXA3-205ENST00000522456 MYT1LQ9UL68 1186 aa34.68■■■■□ 3.14
HOXA3-205ENST00000522456 REREQ9P2R6 1566 aa34.66■■■■□ 3.14
HOXA3-205ENST00000522456 ABCA6Q8N139 1617 aa34.65■■■■□ 3.14
HOXA3-205ENST00000522456 MLH3Q9UHC1 1453 aa34.65■■■■□ 3.14
HOXA3-205ENST00000522456 ITSN2Q9NZM3 1697 aa34.63■■■■□ 3.13
HOXA3-205ENST00000522456 TRAPPC8Q9Y2L5 1435 aa34.62■■■■□ 3.13
HOXA3-205ENST00000522456 CDC42BPAQ5VT25 1732 aa34.61■■■■□ 3.13
HOXA3-205ENST00000522456 MTUS2Q5JR59 1369 aa34.61■■■■□ 3.13
HOXA3-205ENST00000522456 PREX1Q8TCU6 1659 aa34.6■■■■□ 3.13
HOXA3-205ENST00000522456 EHBP1L1Q8N3D4 1523 aa34.56■■■■□ 3.12
HOXA3-205ENST00000522456 CEBPAP49715 358 aaPredicted RBP34.56■■■■□ 3.12
HOXA3-205ENST00000522456 AGLP35573 1532 aa34.53■■■■□ 3.12
HOXA3-205ENST00000522456 KIDINS220Q9ULH0 1771 aa34.5■■■■□ 3.11
HOXA3-205ENST00000522456 SAMD9LQ8IVG5 1584 aa34.48■■■■□ 3.11
HOXA3-205ENST00000522456 GPATCH8Q9UKJ3 1502 aaKnown RBP34.47■■■■□ 3.11
HOXA3-205ENST00000522456 TIAM1Q13009 1591 aa34.47■■■■□ 3.11
HOXA3-205ENST00000522456 UHRF1BP1Q6BDS2 1440 aa34.46■■■■□ 3.11
HOXA3-205ENST00000522456 CCNB3Q8WWL7 1395 aa34.45■■■■□ 3.11
HOXA3-205ENST00000522456 SYCP2Q9BX26 1530 aa34.45■■■■□ 3.1
HOXA3-205ENST00000522456 ZNF777Q9ULD5 760 aaPredicted RBP34.44■■■■□ 3.1
HOXA3-205ENST00000522456 C3P01024 1663 aa34.44■■■■□ 3.1
HOXA3-205ENST00000522456 APLP2Q06481 763 aa34.41■■■■□ 3.1
HOXA3-205ENST00000522456 ESF1Q9H501 851 aaKnown RBP34.4■■■■□ 3.1
HOXA3-205ENST00000522456 SETD1BQ9UPS6 1966 aaKnown RBP34.38■■■■□ 3.09
HOXA3-205ENST00000522456 MAP3K1Q13233 1512 aa34.37■■■■□ 3.09
HOXA3-205ENST00000522456 SUPT6HQ7KZ85 1726 aaKnown RBP34.36■■■■□ 3.09
HOXA3-205ENST00000522456 CERKQ8TCT0 537 aa34.36■■■■□ 3.09
HOXA3-205ENST00000522456 CFDP1Q9UEE9 299 aaPredicted RBP34.36■■■■□ 3.09
HOXA3-205ENST00000522456 PLEKHH2Q8IVE3 1493 aa34.35■■■■□ 3.09
HOXA3-205ENST00000522456 STRCQ7RTU9 1775 aa34.35■■■■□ 3.09
HOXA3-205ENST00000522456 CNTLNQ9NXG0 1405 aa34.35■■■■□ 3.09
HOXA3-205ENST00000522456 SPAG9O60271 1321 aaKnown RBP34.34■■■■□ 3.09
HOXA3-205ENST00000522456 LRRC9Q6ZRR7 1453 aa34.34■■■■□ 3.09
HOXA3-205ENST00000522456 KIAA1107Q9UPP5 1409 aa34.33■■■■□ 3.09
HOXA3-205ENST00000522456 HNRNPMP52272 730 aaKnown RBP eCLIP34.33■■■■□ 3.09
HOXA3-205ENST00000522456 KANK4Q5T7N3 995 aaPredicted RBP34.32■■■■□ 3.08
HOXA3-205ENST00000522456 ATP7AQ04656 1500 aa34.31■■■■□ 3.08
HOXA3-205ENST00000522456 DMRT2Q9Y5R5 561 aa34.3■■■■□ 3.08
HOXA3-205ENST00000522456 INO80Q9ULG1 1556 aaPredicted RBP34.29■■■■□ 3.08
HOXA3-205ENST00000522456 NCOA2Q15596 1464 aa34.29■■■■□ 3.08
HOXA3-205ENST00000522456 MROH2AA6NES4 1674 aa34.25■■■■□ 3.07
HOXA3-205ENST00000522456 PLXNC1O60486 1568 aa34.24■■■■□ 3.07
HOXA3-205ENST00000522456 A2MP01023 1474 aa34.21■■■■□ 3.07
HOXA3-205ENST00000522456 NPATQ14207 1427 aa34.19■■■■□ 3.06
HOXA3-205ENST00000522456 PTPRTO14522 1441 aa34.18■■■■□ 3.06
HOXA3-205ENST00000522456 ZMYM3Q14202 1370 aa34.15■■■■□ 3.06
HOXA3-205ENST00000522456 CLTCQ00610 1675 aaKnown RBP34.14■■■■□ 3.06
HOXA3-205ENST00000522456 ZNF644Q9H582 1327 aaPredicted RBP34.13■■■■□ 3.05
HOXA3-205ENST00000522456 NCOA1Q15788 1441 aa34.13■■■■□ 3.05
HOXA3-205ENST00000522456 ADGBQ8N7X0 1667 aa34.12■■■■□ 3.05
HOXA3-205ENST00000522456 MBD5Q9P267 1494 aa34.1■■■■□ 3.05
HOXA3-205ENST00000522456 CAMSAP2Q08AD1 1489 aa34.09■■■■□ 3.05
HOXA3-205ENST00000522456 CAMSAP1Q5T5Y3 1602 aa34.06■■■■□ 3.04
HOXA3-205ENST00000522456 GGT6Q6P531 493 aa34.06■■■■□ 3.04
HOXA3-205ENST00000522456 MYO3AQ8NEV4 1616 aa34.04■■■■□ 3.04
HOXA3-205ENST00000522456 RTEL1-TNFRSF6BF6WH68 1400 aa34.04■■■■□ 3.04
HOXA3-205ENST00000522456 CCDC141Q6ZP82 1450 aa34.01■■■■□ 3.04
HOXA3-205ENST00000522456 ZNF142P52746 1687 aaPredicted RBP34.01■■■■□ 3.04
HOXA3-205ENST00000522456 RSPH4AQ5TD94 716 aa34.01■■■■□ 3.03
HOXA3-205ENST00000522456 PTPRKQ15262 1439 aa34.01■■■■□ 3.03
HOXA3-205ENST00000522456 MYOM3Q5VTT5 1437 aa34■■■■□ 3.03
HOXA3-205ENST00000522456 MIA2Q96PC5 1412 aa33.99■■■■□ 3.03
HOXA3-205ENST00000522456 PPP6R1Q9UPN7 881 aa33.99■■■■□ 3.03
HOXA3-205ENST00000522456 LTBP4Q8N2S1 1624 aa33.98■■■■□ 3.03
HOXA3-205ENST00000522456 ARHGEF5Q12774 1597 aa33.98■■■■□ 3.03
HOXA3-205ENST00000522456 CEP170BQ9Y4F5 1589 aaPredicted RBP33.96■■■■□ 3.03
HOXA3-205ENST00000522456 DHX29Q7Z478 1369 aaKnown RBP33.95■■■■□ 3.02
HOXA3-205ENST00000522456 PLA2R1Q13018 1463 aa33.92■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms