RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PLCH2O75038 1416 aa20.44■□□□□ 0.86
CLK4-210ENST00000522136 MIA2Q96PC5 1412 aa20.44■□□□□ 0.86
CLK4-210ENST00000522136 PTPN23Q9H3S7 1636 aa20.43■□□□□ 0.86
CLK4-210ENST00000522136 CD109Q6YHK3 1445 aa20.42■□□□□ 0.86
CLK4-210ENST00000522136 GLI2P10070 1586 aa20.42■□□□□ 0.86
CLK4-210ENST00000522136 ARHGAP5Q13017 1502 aa20.42■□□□□ 0.86
CLK4-210ENST00000522136 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
CLK4-210ENST00000522136 KIF13AQ9H1H9 1805 aa20.41■□□□□ 0.86
CLK4-210ENST00000522136 MAP3K4Q9Y6R4 1608 aa20.39■□□□□ 0.85
CLK4-210ENST00000522136 TCOF1Q13428 1488 aaKnown RBP20.39■□□□□ 0.85
CLK4-210ENST00000522136 EFCAB2Q5VUJ9 269 aa20.37■□□□□ 0.85
CLK4-210ENST00000522136 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
CLK4-210ENST00000522136 ITGAEP38570 1179 aa20.37■□□□□ 0.85
CLK4-210ENST00000522136 TSPOAP1O95153 1857 aa20.36■□□□□ 0.85
CLK4-210ENST00000522136 SAMD9LQ8IVG5 1584 aa20.36■□□□□ 0.85
CLK4-210ENST00000522136 ARAP3Q8WWN8 1544 aa20.35■□□□□ 0.85
CLK4-210ENST00000522136 FANCAO15360 1455 aa20.34■□□□□ 0.85
CLK4-210ENST00000522136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.34■□□□□ 0.85
CLK4-210ENST00000522136 TRHP20396 242 aaPredicted RBP20.33■□□□□ 0.84
CLK4-210ENST00000522136 HNRNPMP52272 730 aaKnown RBP eCLIP20.32■□□□□ 0.84
CLK4-210ENST00000522136 PPRC1Q5VV67 1664 aaKnown RBP20.3■□□□□ 0.84
CLK4-210ENST00000522136 ARHGEF12Q9NZN5 1544 aa20.28■□□□□ 0.84
CLK4-210ENST00000522136 SYCP2Q9BX26 1530 aa20.28■□□□□ 0.84
CLK4-210ENST00000522136 AKNAQ7Z591 1439 aa20.27■□□□□ 0.84
CLK4-210ENST00000522136 PTPRKQ15262 1439 aa20.27■□□□□ 0.84
CLK4-210ENST00000522136 MBD5Q9P267 1494 aa20.26■□□□□ 0.83
CLK4-210ENST00000522136 ABCC1P33527 1531 aa20.26■□□□□ 0.83
CLK4-210ENST00000522136 ABCC5O15440 1437 aa20.26■□□□□ 0.83
CLK4-210ENST00000522136 DAPK1P53355 1430 aa20.25■□□□□ 0.83
CLK4-210ENST00000522136 DNMT1P26358 1616 aaKnown RBP20.25■□□□□ 0.83
CLK4-210ENST00000522136 CFAP74Q9C0B2 1584 aa20.25■□□□□ 0.83
CLK4-210ENST00000522136 ADGRL1O94910 1474 aa20.25■□□□□ 0.83
CLK4-210ENST00000522136 PLEKHH2Q8IVE3 1493 aa20.25■□□□□ 0.83
CLK4-210ENST00000522136 KIAA1107Q9UPP5 1409 aa20.25■□□□□ 0.83
CLK4-210ENST00000522136 CHIC2Q9UKJ5 165 aa20.24■□□□□ 0.83
CLK4-210ENST00000522136 SCAPERQ9BY12 1400 aa20.23■□□□□ 0.83
CLK4-210ENST00000522136 NEO1Q92859 1461 aa20.23■□□□□ 0.83
CLK4-210ENST00000522136 TRAPPC8Q9Y2L5 1435 aa20.22■□□□□ 0.83
CLK4-210ENST00000522136 ARHGEF5Q12774 1597 aa20.21■□□□□ 0.83
CLK4-210ENST00000522136 TEX14Q8IWB6 1497 aa20.21■□□□□ 0.83
CLK4-210ENST00000522136 AFAP1Q8N556 730 aa20.2■□□□□ 0.82
CLK4-210ENST00000522136 CCDC141Q6ZP82 1450 aa20.19■□□□□ 0.82
CLK4-210ENST00000522136 CROCC2H7BZ55 1655 aa20.19■□□□□ 0.82
CLK4-210ENST00000522136 RSPH4AQ5TD94 716 aa20.18■□□□□ 0.82
CLK4-210ENST00000522136 TSPY4P0CV99 314 aa20.17■□□□□ 0.82
CLK4-210ENST00000522136 TSPY10P0CW01 314 aa20.17■□□□□ 0.82
CLK4-210ENST00000522136 RAPGEF3O95398 923 aa20.15■□□□□ 0.82
CLK4-210ENST00000522136 RRP7BPQ9NSQ0 103 aa20.15■□□□□ 0.82
CLK4-210ENST00000522136 C9orf84Q5VXU9 1444 aa20.14■□□□□ 0.81
CLK4-210ENST00000522136 DENND4BO75064 1496 aaPredicted RBP20.13■□□□□ 0.81
CLK4-210ENST00000522136 POGZQ7Z3K3 1410 aa20.12■□□□□ 0.81
CLK4-210ENST00000522136 SHANK2Q9UPX8 1470 aa20.12■□□□□ 0.81
CLK4-210ENST00000522136 SPAG9O60271 1321 aaKnown RBP20.11■□□□□ 0.81
CLK4-210ENST00000522136 ZNF518AQ6AHZ1 1483 aa20.11■□□□□ 0.81
CLK4-210ENST00000522136 COL17A1Q9UMD9 1497 aaPredicted RBP20.11■□□□□ 0.81
CLK4-210ENST00000522136 ADGBQ8N7X0 1667 aa20.1■□□□□ 0.81
CLK4-210ENST00000522136 RICTORQ6R327 1708 aa20.1■□□□□ 0.81
CLK4-210ENST00000522136 NCOA1Q15788 1441 aa20.09■□□□□ 0.81
CLK4-210ENST00000522136 MAST1Q9Y2H9 1570 aa20.09■□□□□ 0.81
CLK4-210ENST00000522136 MYT1LQ9UL68 1186 aa20.08■□□□□ 0.81
CLK4-210ENST00000522136 ROCK1Q13464 1354 aa20.08■□□□□ 0.81
CLK4-210ENST00000522136 FRMPD1Q5SYB0 1578 aa20.08■□□□□ 0.8
CLK4-210ENST00000522136 ADGRL2O95490 1459 aa20.08■□□□□ 0.8
CLK4-210ENST00000522136 ANKRD30AQ9BXX3 1397 aa20.07■□□□□ 0.8
CLK4-210ENST00000522136 KDM5CP41229 1560 aa20.07■□□□□ 0.8
CLK4-210ENST00000522136 HFM1A2PYH4 1435 aa20.06■□□□□ 0.8
CLK4-210ENST00000522136 NAIPQ13075 1403 aa20.06■□□□□ 0.8
CLK4-210ENST00000522136 ZFYVE16Q7Z3T8 1539 aa20.05■□□□□ 0.8
CLK4-210ENST00000522136 SETD5Q9C0A6 1442 aa20.04■□□□□ 0.8
CLK4-210ENST00000522136 INO80Q9ULG1 1556 aaPredicted RBP20.04■□□□□ 0.8
CLK4-210ENST00000522136 ATP7AQ04656 1500 aa20.04■□□□□ 0.8
CLK4-210ENST00000522136 RTEL1-TNFRSF6BF6WH68 1400 aa20.04■□□□□ 0.8
CLK4-210ENST00000522136 KIDINS220Q9ULH0 1771 aa20.04■□□□□ 0.8
CLK4-210ENST00000522136 KIF15Q9NS87 1388 aa20.02■□□□□ 0.8
CLK4-210ENST00000522136 GCC2Q8IWJ2 1684 aa20.02■□□□□ 0.8
CLK4-210ENST00000522136 RAB3GAP2Q9H2M9 1393 aa20.02■□□□□ 0.8
CLK4-210ENST00000522136 HECW2Q9P2P5 1572 aa20.02■□□□□ 0.79
CLK4-210ENST00000522136 KDM6BO15054 1643 aa20.01■□□□□ 0.79
CLK4-210ENST00000522136 MLH3Q9UHC1 1453 aa20.01■□□□□ 0.79
CLK4-210ENST00000522136 PLXNC1O60486 1568 aa20.01■□□□□ 0.79
CLK4-210ENST00000522136 ZMYM4Q5VZL5 1548 aa19.98■□□□□ 0.79
CLK4-210ENST00000522136 YEATS2Q9ULM3 1422 aa19.97■□□□□ 0.79
CLK4-210ENST00000522136 ABCA6Q8N139 1617 aa19.96■□□□□ 0.79
CLK4-210ENST00000522136 ANKRD50Q9ULJ7 1429 aa19.96■□□□□ 0.79
CLK4-210ENST00000522136 DUOX2Q9NRD8 1548 aa19.94■□□□□ 0.78
CLK4-210ENST00000522136 DIP2CQ9Y2E4 1556 aa19.93■□□□□ 0.78
CLK4-210ENST00000522136 MAGI2Q86UL8 1455 aa19.92■□□□□ 0.78
CLK4-210ENST00000522136 A2MP01023 1474 aa19.91■□□□□ 0.78
CLK4-210ENST00000522136 DHX29Q7Z478 1369 aaKnown RBP19.9■□□□□ 0.78
CLK4-210ENST00000522136 HRCP23327 699 aa19.9■□□□□ 0.78
CLK4-210ENST00000522136 TRIM52Q96A61 297 aa19.88■□□□□ 0.77
CLK4-210ENST00000522136 ERBINQ96RT1 1412 aa19.88■□□□□ 0.77
CLK4-210ENST00000522136 ATP10AO60312 1499 aa19.87■□□□□ 0.77
CLK4-210ENST00000522136 ARHGEF40Q8TER5 1519 aa19.85■□□□□ 0.77
CLK4-210ENST00000522136 KIF3BO15066 747 aa19.85■□□□□ 0.77
CLK4-210ENST00000522136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.83■□□□□ 0.773e-8■■■■□ 20.2
CLK4-210ENST00000522136 SIGLEC1Q9BZZ2 1709 aa19.82■□□□□ 0.76
CLK4-210ENST00000522136 EIF2AK4Q9P2K8 1649 aaKnown RBP19.81■□□□□ 0.76
CLK4-210ENST00000522136 DHX57Q6P158 1386 aaKnown RBP19.8■□□□□ 0.76
CLK4-210ENST00000522136 NUP155O75694 1391 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms