RNA–Protein interactions for RNA: ENST00000521723.1

PDGFRB-209, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 5

Gene PDGFRB, Length 400 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-209ENST00000521723 CDC42BPAQ5VT25 1732 aa17.19■□□□□ 0.34
PDGFRB-209ENST00000521723 FRMPD1Q5SYB0 1578 aa17.19■□□□□ 0.34
PDGFRB-209ENST00000521723 ADGRL1O94910 1474 aa17.18■□□□□ 0.34
PDGFRB-209ENST00000521723 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
PDGFRB-209ENST00000521723 LRRC9Q6ZRR7 1453 aa17.17■□□□□ 0.34
PDGFRB-209ENST00000521723 GPATCH8Q9UKJ3 1502 aaKnown RBP17.16■□□□□ 0.34
PDGFRB-209ENST00000521723 RICTORQ6R327 1708 aa17.16■□□□□ 0.34
PDGFRB-209ENST00000521723 SCAPERQ9BY12 1400 aa17.16■□□□□ 0.34
PDGFRB-209ENST00000521723 SUPT6HQ7KZ85 1726 aaKnown RBP17.16■□□□□ 0.34
PDGFRB-209ENST00000521723 CCNB3Q8WWL7 1395 aa17.15■□□□□ 0.34
PDGFRB-209ENST00000521723 POGZQ7Z3K3 1410 aa17.14■□□□□ 0.33
PDGFRB-209ENST00000521723 NCOA2Q15596 1464 aa17.13■□□□□ 0.33
PDGFRB-209ENST00000521723 ABCC1P33527 1531 aa17.12■□□□□ 0.33
PDGFRB-209ENST00000521723 ZMYM4Q5VZL5 1548 aa17.12■□□□□ 0.33
PDGFRB-209ENST00000521723 APLP2Q06481 763 aa17.12■□□□□ 0.33
PDGFRB-209ENST00000521723 ITSN2Q9NZM3 1697 aa17.12■□□□□ 0.33
PDGFRB-209ENST00000521723 KANK4Q5T7N3 995 aaPredicted RBP17.1■□□□□ 0.33
PDGFRB-209ENST00000521723 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
PDGFRB-209ENST00000521723 SAMD9LQ8IVG5 1584 aa17.1■□□□□ 0.33
PDGFRB-209ENST00000521723 ZNF518AQ6AHZ1 1483 aa17.09■□□□□ 0.33
PDGFRB-209ENST00000521723 ARHGEF40Q8TER5 1519 aa17.08■□□□□ 0.32
PDGFRB-209ENST00000521723 ARHGEF12Q9NZN5 1544 aa17.08■□□□□ 0.32
PDGFRB-209ENST00000521723 MAGI2Q86UL8 1455 aa17.08■□□□□ 0.32
PDGFRB-209ENST00000521723 KDM5CP41229 1560 aa17.07■□□□□ 0.32
PDGFRB-209ENST00000521723 PLEKHH2Q8IVE3 1493 aa17.07■□□□□ 0.32
PDGFRB-209ENST00000521723 ZNF777Q9ULD5 760 aaPredicted RBP17.06■□□□□ 0.32
PDGFRB-209ENST00000521723 ZFYVE16Q7Z3T8 1539 aa17.06■□□□□ 0.32
PDGFRB-209ENST00000521723 KIAA1107Q9UPP5 1409 aa17.05■□□□□ 0.32
PDGFRB-209ENST00000521723 SYCP2Q9BX26 1530 aa17.05■□□□□ 0.32
PDGFRB-209ENST00000521723 TRAPPC8Q9Y2L5 1435 aa17.04■□□□□ 0.32
PDGFRB-209ENST00000521723 AFAP1Q8N556 730 aa17.03■□□□□ 0.32
PDGFRB-209ENST00000521723 YEATS2Q9ULM3 1422 aa17.03■□□□□ 0.32
PDGFRB-209ENST00000521723 HECW2Q9P2P5 1572 aa17.02■□□□□ 0.31
PDGFRB-209ENST00000521723 MLH3Q9UHC1 1453 aa17■□□□□ 0.31
PDGFRB-209ENST00000521723 MYOM3Q5VTT5 1437 aa17■□□□□ 0.31
PDGFRB-209ENST00000521723 CAMSAP2Q08AD1 1489 aa16.99■□□□□ 0.31
PDGFRB-209ENST00000521723 ZNF644Q9H582 1327 aaPredicted RBP16.99■□□□□ 0.31
PDGFRB-209ENST00000521723 HNRNPMP52272 730 aaKnown RBP eCLIP16.99■□□□□ 0.31
PDGFRB-209ENST00000521723 MIA2Q96PC5 1412 aa16.98■□□□□ 0.31
PDGFRB-209ENST00000521723 KDM4FA0A1W2PPD8 638 aa16.98■□□□□ 0.31
PDGFRB-209ENST00000521723 MBD5Q9P267 1494 aa16.98■□□□□ 0.31
PDGFRB-209ENST00000521723 ATP10AO60312 1499 aa16.97■□□□□ 0.31
PDGFRB-209ENST00000521723 DIP2CQ9Y2E4 1556 aa16.96■□□□□ 0.31
PDGFRB-209ENST00000521723 C9orf84Q5VXU9 1444 aa16.96■□□□□ 0.3
PDGFRB-209ENST00000521723 KIDINS220Q9ULH0 1771 aa16.95■□□□□ 0.3
PDGFRB-209ENST00000521723 ABCA6Q8N139 1617 aa16.95■□□□□ 0.3
PDGFRB-209ENST00000521723 MYT1LQ9UL68 1186 aa16.94■□□□□ 0.3
PDGFRB-209ENST00000521723 SPAG9O60271 1321 aaKnown RBP16.94■□□□□ 0.3
PDGFRB-209ENST00000521723 INO80Q9ULG1 1556 aaPredicted RBP16.94■□□□□ 0.3
PDGFRB-209ENST00000521723 CCDC141Q6ZP82 1450 aa16.93■□□□□ 0.3
PDGFRB-209ENST00000521723 ARHGEF5Q12774 1597 aa16.93■□□□□ 0.3
PDGFRB-209ENST00000521723 REREQ9P2R6 1566 aa16.93■□□□□ 0.3
PDGFRB-209ENST00000521723 ARID4BQ4LE39 1312 aaPredicted RBP16.93■□□□□ 0.3
PDGFRB-209ENST00000521723 SIGLEC1Q9BZZ2 1709 aa16.93■□□□□ 0.3
PDGFRB-209ENST00000521723 ATP7AQ04656 1500 aa16.92■□□□□ 0.3
PDGFRB-209ENST00000521723 RSPH4AQ5TD94 716 aa16.92■□□□□ 0.3
PDGFRB-209ENST00000521723 BCORL1Q5H9F3 1711 aa16.91■□□□□ 0.3
PDGFRB-209ENST00000521723 AEBP2Q6ZN18 517 aaPredicted RBP16.91■□□□□ 0.3
PDGFRB-209ENST00000521723 FGD6Q6ZV73 1430 aa16.9■□□□□ 0.3
PDGFRB-209ENST00000521723 PTPN23Q9H3S7 1636 aa16.89■□□□□ 0.29
PDGFRB-209ENST00000521723 RTEL1-TNFRSF6BF6WH68 1400 aa16.89■□□□□ 0.29
PDGFRB-209ENST00000521723 ADAMTSL3P82987 1691 aa16.89■□□□□ 0.29
PDGFRB-209ENST00000521723 TCOF1Q13428 1488 aaKnown RBP16.88■□□□□ 0.29
PDGFRB-209ENST00000521723 AGLP35573 1532 aa16.87■□□□□ 0.29
PDGFRB-209ENST00000521723 PLXNC1O60486 1568 aa16.84■□□□□ 0.29
PDGFRB-209ENST00000521723 MAST1Q9Y2H9 1570 aa16.84■□□□□ 0.29
PDGFRB-209ENST00000521723 ADGBQ8N7X0 1667 aa16.84■□□□□ 0.29
PDGFRB-209ENST00000521723 A2MP01023 1474 aa16.83■□□□□ 0.28
PDGFRB-209ENST00000521723 TSPY4P0CV99 314 aa16.83■□□□□ 0.28
PDGFRB-209ENST00000521723 TSPY10P0CW01 314 aa16.83■□□□□ 0.28
PDGFRB-209ENST00000521723 MADDQ8WXG6 1647 aa16.83■□□□□ 0.28
PDGFRB-209ENST00000521723 CROCC2H7BZ55 1655 aa16.81■□□□□ 0.28
PDGFRB-209ENST00000521723 DNMT1P26358 1616 aaKnown RBP16.81■□□□□ 0.28
PDGFRB-209ENST00000521723 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
PDGFRB-209ENST00000521723 ABCC5O15440 1437 aa16.8■□□□□ 0.28
PDGFRB-209ENST00000521723 MLECQ14165 292 aa16.8■□□□□ 0.28
PDGFRB-209ENST00000521723 DAPK1P53355 1430 aa16.79■□□□□ 0.28
PDGFRB-209ENST00000521723 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
PDGFRB-209ENST00000521723 FER1L4A9Z1Z3 1794 aa16.79■□□□□ 0.28
PDGFRB-209ENST00000521723 PTPRMP28827 1452 aa16.79■□□□□ 0.28
PDGFRB-209ENST00000521723 RIMS1Q86UR5 1692 aaKnown RBP16.78■□□□□ 0.28
PDGFRB-209ENST00000521723 DHX29Q7Z478 1369 aaKnown RBP16.77■□□□□ 0.28
PDGFRB-209ENST00000521723 FAM50AQ14320 339 aaKnown RBP16.75■□□□□ 0.27
PDGFRB-209ENST00000521723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.72■□□□□ 0.27
PDGFRB-209ENST00000521723 CNTLNQ9NXG0 1405 aa16.7■□□□□ 0.26
PDGFRB-209ENST00000521723 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
PDGFRB-209ENST00000521723 KIF15Q9NS87 1388 aa16.7■□□□□ 0.26
PDGFRB-209ENST00000521723 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
PDGFRB-209ENST00000521723 ADGRL2O95490 1459 aa16.69■□□□□ 0.26
PDGFRB-209ENST00000521723 ANKRD30AQ9BXX3 1397 aa16.69■□□□□ 0.26
PDGFRB-209ENST00000521723 ESF1Q9H501 851 aaKnown RBP16.69■□□□□ 0.26
PDGFRB-209ENST00000521723 EIF2AK4Q9P2K8 1649 aaKnown RBP16.69■□□□□ 0.26
PDGFRB-209ENST00000521723 KIF3BO15066 747 aa16.68■□□□□ 0.26
PDGFRB-209ENST00000521723 GGT6Q6P531 493 aa16.68■□□□□ 0.26
PDGFRB-209ENST00000521723 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
PDGFRB-209ENST00000521723 CHIC2Q9UKJ5 165 aa16.67■□□□□ 0.26
PDGFRB-209ENST00000521723 NCOA1Q15788 1441 aa16.67■□□□□ 0.26
PDGFRB-209ENST00000521723 ERBINQ96RT1 1412 aa16.67■□□□□ 0.26
PDGFRB-209ENST00000521723 FAM135AQ9P2D6 1515 aa16.66■□□□□ 0.26
PDGFRB-209ENST00000521723 MROH2AA6NES4 1674 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms