RNA–Protein interactions for RNA: ENST00000521664.1

NDRG1-220, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-220ENST00000521664 POGZQ7Z3K3 1410 aa27.39■■□□□ 1.97
NDRG1-220ENST00000521664 MAGI2Q86UL8 1455 aa27.38■■□□□ 1.97
NDRG1-220ENST00000521664 ZMYM4Q5VZL5 1548 aa27.37■■□□□ 1.97
NDRG1-220ENST00000521664 ARHGEF40Q8TER5 1519 aa27.37■■□□□ 1.97
NDRG1-220ENST00000521664 ZFYVE16Q7Z3T8 1539 aa27.36■■□□□ 1.97
NDRG1-220ENST00000521664 MYT1LQ9UL68 1186 aa27.33■■□□□ 1.97
NDRG1-220ENST00000521664 YEATS2Q9ULM3 1422 aa27.33■■□□□ 1.96
NDRG1-220ENST00000521664 LOC105371045A0A1W2PR82 267 aa27.32■■□□□ 1.96
NDRG1-220ENST00000521664 AFAP1Q8N556 730 aa27.3■■□□□ 1.96
NDRG1-220ENST00000521664 ZNF518AQ6AHZ1 1483 aa27.3■■□□□ 1.96
NDRG1-220ENST00000521664 MTUS2Q5JR59 1369 aa27.29■■□□□ 1.96
NDRG1-220ENST00000521664 BCORL1Q5H9F3 1711 aa27.28■■□□□ 1.96
NDRG1-220ENST00000521664 CDC42BPBQ9Y5S2 1711 aa27.28■■□□□ 1.96
NDRG1-220ENST00000521664 ADAMTSL3P82987 1691 aa27.28■■□□□ 1.96
NDRG1-220ENST00000521664 ZNF777Q9ULD5 760 aaPredicted RBP27.27■■□□□ 1.96
NDRG1-220ENST00000521664 PREX2Q70Z35 1606 aa27.27■■□□□ 1.96
NDRG1-220ENST00000521664 PTPRMP28827 1452 aa27.25■■□□□ 1.95
NDRG1-220ENST00000521664 ATP10AO60312 1499 aa27.24■■□□□ 1.95
NDRG1-220ENST00000521664 MLECQ14165 292 aa27.23■■□□□ 1.95
NDRG1-220ENST00000521664 CCNB3Q8WWL7 1395 aa27.22■■□□□ 1.95
NDRG1-220ENST00000521664 CDC42BPAQ5VT25 1732 aa27.21■■□□□ 1.95
NDRG1-220ENST00000521664 MADDQ8WXG6 1647 aa27.2■■□□□ 1.95
NDRG1-220ENST00000521664 C9orf84Q5VXU9 1444 aa27.2■■□□□ 1.94
NDRG1-220ENST00000521664 CFDP1Q9UEE9 299 aaPredicted RBP27.2■■□□□ 1.94
NDRG1-220ENST00000521664 GPATCH8Q9UKJ3 1502 aaKnown RBP27.2■■□□□ 1.94
NDRG1-220ENST00000521664 ABCC1P33527 1531 aa27.18■■□□□ 1.94
NDRG1-220ENST00000521664 KDM5CP41229 1560 aa27.18■■□□□ 1.94
NDRG1-220ENST00000521664 HECW2Q9P2P5 1572 aa27.18■■□□□ 1.94
NDRG1-220ENST00000521664 TRAPPC8Q9Y2L5 1435 aa27.16■■□□□ 1.94
NDRG1-220ENST00000521664 ARHGEF12Q9NZN5 1544 aa27.16■■□□□ 1.94
NDRG1-220ENST00000521664 PLPPR3Q6T4P5 718 aa27.14■■□□□ 1.94
NDRG1-220ENST00000521664 MLH3Q9UHC1 1453 aa27.13■■□□□ 1.93
NDRG1-220ENST00000521664 EHBP1L1Q8N3D4 1523 aa27.12■■□□□ 1.93
NDRG1-220ENST00000521664 RIMS1Q86UR5 1692 aaKnown RBP27.12■■□□□ 1.93
NDRG1-220ENST00000521664 ITSN2Q9NZM3 1697 aa27.12■■□□□ 1.93
NDRG1-220ENST00000521664 HNRNPMP52272 730 aaKnown RBP eCLIP27.12■■□□□ 1.93
NDRG1-220ENST00000521664 SIGLEC1Q9BZZ2 1709 aa27.11■■□□□ 1.93
NDRG1-220ENST00000521664 PLEKHH2Q8IVE3 1493 aa27.09■■□□□ 1.93
NDRG1-220ENST00000521664 SAMD9LQ8IVG5 1584 aa27.09■■□□□ 1.93
NDRG1-220ENST00000521664 VPS8Q8N3P4 1428 aa27.08■■□□□ 1.93
NDRG1-220ENST00000521664 DIP2CQ9Y2E4 1556 aa27.07■■□□□ 1.92
NDRG1-220ENST00000521664 SPAG9O60271 1321 aaKnown RBP27.07■■□□□ 1.92
NDRG1-220ENST00000521664 KIAA1107Q9UPP5 1409 aa27.07■■□□□ 1.92
NDRG1-220ENST00000521664 SYCP2Q9BX26 1530 aa27.06■■□□□ 1.92
NDRG1-220ENST00000521664 ABCA6Q8N139 1617 aa27.02■■□□□ 1.92
NDRG1-220ENST00000521664 FER1L4A9Z1Z3 1794 aa27.02■■□□□ 1.92
NDRG1-220ENST00000521664 ESF1Q9H501 851 aaKnown RBP27.01■■□□□ 1.91
NDRG1-220ENST00000521664 TIAM1Q13009 1591 aa27.01■■□□□ 1.91
NDRG1-220ENST00000521664 REREQ9P2R6 1566 aa27.01■■□□□ 1.91
NDRG1-220ENST00000521664 ZNF644Q9H582 1327 aaPredicted RBP26.99■■□□□ 1.91
NDRG1-220ENST00000521664 KIDINS220Q9ULH0 1771 aa26.99■■□□□ 1.91
NDRG1-220ENST00000521664 NCOA2Q15596 1464 aa26.98■■□□□ 1.91
NDRG1-220ENST00000521664 SUPT6HQ7KZ85 1726 aaKnown RBP26.97■■□□□ 1.91
NDRG1-220ENST00000521664 AGLP35573 1532 aa26.95■■□□□ 1.91
NDRG1-220ENST00000521664 CEBPAP49715 358 aaPredicted RBP26.93■■□□□ 1.9
NDRG1-220ENST00000521664 APLP2Q06481 763 aa26.93■■□□□ 1.9
NDRG1-220ENST00000521664 ATP7AQ04656 1500 aa26.92■■□□□ 1.9
NDRG1-220ENST00000521664 LRRC9Q6ZRR7 1453 aa26.92■■□□□ 1.9
NDRG1-220ENST00000521664 LMTK3Q96Q04 1460 aa26.9■■□□□ 1.9
NDRG1-220ENST00000521664 MAP3K1Q13233 1512 aa26.88■■□□□ 1.89
NDRG1-220ENST00000521664 MBD5Q9P267 1494 aa26.87■■□□□ 1.89
NDRG1-220ENST00000521664 KANK4Q5T7N3 995 aaPredicted RBP26.87■■□□□ 1.89
NDRG1-220ENST00000521664 RSPH4AQ5TD94 716 aa26.87■■□□□ 1.89
NDRG1-220ENST00000521664 HSPA2P54652 639 aa26.86■■□□□ 1.89
NDRG1-220ENST00000521664 INO80Q9ULG1 1556 aaPredicted RBP26.85■■□□□ 1.89
NDRG1-220ENST00000521664 A2MP01023 1474 aa26.85■■□□□ 1.89
NDRG1-220ENST00000521664 CAMSAP2Q08AD1 1489 aa26.84■■□□□ 1.89
NDRG1-220ENST00000521664 CNTLNQ9NXG0 1405 aa26.82■■□□□ 1.88
NDRG1-220ENST00000521664 RTEL1-TNFRSF6BF6WH68 1400 aa26.82■■□□□ 1.88
NDRG1-220ENST00000521664 CCDC141Q6ZP82 1450 aa26.81■■□□□ 1.88
NDRG1-220ENST00000521664 TSPY4P0CV99 314 aa26.8■■□□□ 1.88
NDRG1-220ENST00000521664 TSPY10P0CW01 314 aa26.8■■□□□ 1.88
NDRG1-220ENST00000521664 GGT6Q6P531 493 aa26.79■■□□□ 1.88
NDRG1-220ENST00000521664 ADGBQ8N7X0 1667 aa26.76■■□□□ 1.87
NDRG1-220ENST00000521664 SETD1BQ9UPS6 1966 aaKnown RBP26.75■■□□□ 1.87
NDRG1-220ENST00000521664 PLXNC1O60486 1568 aa26.75■■□□□ 1.87
NDRG1-220ENST00000521664 UHRF1BP1Q6BDS2 1440 aa26.74■■□□□ 1.87
NDRG1-220ENST00000521664 DHX29Q7Z478 1369 aaKnown RBP26.74■■□□□ 1.87
NDRG1-220ENST00000521664 PREX1Q8TCU6 1659 aa26.74■■□□□ 1.87
NDRG1-220ENST00000521664 PPP6R1Q9UPN7 881 aa26.73■■□□□ 1.87
NDRG1-220ENST00000521664 MYOM3Q5VTT5 1437 aa26.73■■□□□ 1.87
NDRG1-220ENST00000521664 C3P01024 1663 aa26.73■■□□□ 1.87
NDRG1-220ENST00000521664 MIA2Q96PC5 1412 aa26.72■■□□□ 1.87
NDRG1-220ENST00000521664 ZMYM3Q14202 1370 aa26.71■■□□□ 1.87
NDRG1-220ENST00000521664 ARHGEF5Q12774 1597 aa26.71■■□□□ 1.87
NDRG1-220ENST00000521664 ILDR1Q86SU0 546 aaPredicted RBP26.69■■□□□ 1.86
NDRG1-220ENST00000521664 KIF3BO15066 747 aa26.68■■□□□ 1.86
NDRG1-220ENST00000521664 MROH2AA6NES4 1674 aa26.65■■□□□ 1.86
NDRG1-220ENST00000521664 CLTCQ00610 1675 aaKnown RBP26.63■■□□□ 1.85
NDRG1-220ENST00000521664 NPATQ14207 1427 aa26.63■■□□□ 1.85
NDRG1-220ENST00000521664 DMRT2Q9Y5R5 561 aa26.62■■□□□ 1.85
NDRG1-220ENST00000521664 WASHC2CQ9Y4E1 1318 aa26.57■■□□□ 1.84
NDRG1-220ENST00000521664 MAST1Q9Y2H9 1570 aa26.55■■□□□ 1.84
NDRG1-220ENST00000521664 PTPRKQ15262 1439 aa26.54■■□□□ 1.84
NDRG1-220ENST00000521664 FGD6Q6ZV73 1430 aa26.52■■□□□ 1.84
NDRG1-220ENST00000521664 PTPN23Q9H3S7 1636 aa26.52■■□□□ 1.84
NDRG1-220ENST00000521664 FBXO41Q8TF61 875 aa26.5■■□□□ 1.83
NDRG1-220ENST00000521664 KDM5DQ9BY66 1539 aa26.49■■□□□ 1.83
NDRG1-220ENST00000521664 FAM135AQ9P2D6 1515 aa26.49■■□□□ 1.83
NDRG1-220ENST00000521664 ABCC5O15440 1437 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms