RNA–Protein interactions for RNA: ENST00000521656.1

CHMP7-209, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-209ENST00000521656 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.69□□□□□ -1.34
CHMP7-209ENST00000521656 IRX5P78411 483 aaPredicted RBP6.68□□□□□ -1.34
CHMP7-209ENST00000521656 RNF166Q96A37 237 aaPredicted RBP6.68□□□□□ -1.34
CHMP7-209ENST00000521656 SGIP1Q9BQI5 828 aa6.67□□□□□ -1.34
CHMP7-209ENST00000521656 CIZ1Q9ULV3 898 aaPredicted RBP6.66□□□□□ -1.34
CHMP7-209ENST00000521656 PDIA4P13667 645 aaKnown RBP6.65□□□□□ -1.34
CHMP7-209ENST00000521656 GTPBP6O43824 516 aaPredicted RBP6.63□□□□□ -1.35
CHMP7-209ENST00000521656 PLCD3Q8N3E9 789 aa6.63□□□□□ -1.35
CHMP7-209ENST00000521656 PCDHB13Q9Y5F0 798 aa6.63□□□□□ -1.35
CHMP7-209ENST00000521656 TMEM106CQ9BVX2 250 aa6.62□□□□□ -1.35
CHMP7-209ENST00000521656 OCEL1Q9H607 264 aa6.62□□□□□ -1.35
CHMP7-209ENST00000521656 NKX1-1Q15270 411 aaPredicted RBP6.61□□□□□ -1.35
CHMP7-209ENST00000521656 RASEFQ8IZ41 740 aa6.61□□□□□ -1.35
CHMP7-209ENST00000521656 SLC24A3Q9HC58 644 aa6.61□□□□□ -1.35
CHMP7-209ENST00000521656 MIER1Q8N108 512 aa6.6□□□□□ -1.35
CHMP7-209ENST00000521656 ZC3H15Q8WU90 426 aaKnown RBP6.6□□□□□ -1.35
CHMP7-209ENST00000521656 TRIM41Q8WV44 630 aa6.6□□□□□ -1.35
CHMP7-209ENST00000521656 LOC105371045A0A1W2PR82 267 aa6.59□□□□□ -1.35
CHMP7-209ENST00000521656 C1orf115Q9H7X2 142 aa6.59□□□□□ -1.35
CHMP7-209ENST00000521656 EIF5BO60841 1220 aaKnown RBP6.58□□□□□ -1.36
CHMP7-209ENST00000521656 MYT1LQ9UL68 1186 aa6.58□□□□□ -1.36
CHMP7-209ENST00000521656 IFNL1Q8IU54 200 aa6.57□□□□□ -1.36
CHMP7-209ENST00000521656 KCNV2Q8TDN2 545 aa6.56□□□□□ -1.36
CHMP7-209ENST00000521656 NECTIN2Q92692 538 aa6.56□□□□□ -1.36
CHMP7-209ENST00000521656 NUBP1P53384 320 aa6.54□□□□□ -1.36
CHMP7-209ENST00000521656 C3orf67Q6ZVT6 689 aa6.54□□□□□ -1.36
CHMP7-209ENST00000521656 SHROOM4Q9ULL8 1493 aa6.53□□□□□ -1.36
CHMP7-209ENST00000521656 ARID3CA6NKF2 412 aa6.53□□□□□ -1.36
CHMP7-209ENST00000521656 APBB1O00213 710 aa6.53□□□□□ -1.36
CHMP7-209ENST00000521656 RNF25Q96BH1 459 aaPredicted RBP6.53□□□□□ -1.36
CHMP7-209ENST00000521656 WDR70Q9NW82 654 aa6.53□□□□□ -1.36
CHMP7-209ENST00000521656 PLEKHG5O94827 1062 aa6.52□□□□□ -1.37
CHMP7-209ENST00000521656 KCTD17Q8N5Z5 321 aa6.52□□□□□ -1.37
CHMP7-209ENST00000521656 HMGB1P09429 215 aaKnown RBP6.51□□□□□ -1.37
CHMP7-209ENST00000521656 RYDENQ9NUL5 291 aaKnown RBP6.51□□□□□ -1.37
CHMP7-209ENST00000521656 IGSF3O75054 1194 aa6.5□□□□□ -1.37
CHMP7-209ENST00000521656 STK25O00506 426 aa6.49□□□□□ -1.37
CHMP7-209ENST00000521656 CDK11BP21127 795 aaKnown RBP6.49□□□□□ -1.37
CHMP7-209ENST00000521656 CDK11AQ9UQ88 783 aaPredicted RBP6.49□□□□□ -1.37
CHMP7-209ENST00000521656 RAD21O60216 631 aa6.48□□□□□ -1.37
CHMP7-209ENST00000521656 ZBTB47Q9UFB7 747 aaPredicted RBP6.48□□□□□ -1.37
CHMP7-209ENST00000521656 ERBB3P21860 1342 aa6.48□□□□□ -1.37
CHMP7-209ENST00000521656 RIOK3O14730 519 aaKnown RBP6.47□□□□□ -1.37
CHMP7-209ENST00000521656 PTGER2P43116 358 aa6.47□□□□□ -1.37
CHMP7-209ENST00000521656 IL27Q8NEV9 243 aa6.47□□□□□ -1.37
CHMP7-209ENST00000521656 L3MBTL3Q96JM7 780 aaPredicted RBP6.47□□□□□ -1.37
CHMP7-209ENST00000521656 HOXB1P14653 301 aaPredicted RBP6.46□□□□□ -1.38
CHMP7-209ENST00000521656 PDCD7Q8N8D1 485 aaKnown RBP6.46□□□□□ -1.38
CHMP7-209ENST00000521656 ZMYND10O75800 440 aa6.45□□□□□ -1.38
CHMP7-209ENST00000521656 GPBP1L1Q9HC44 474 aaPredicted RBP6.45□□□□□ -1.38
CHMP7-209ENST00000521656 HSP90B1P14625 803 aaKnown RBP6.44□□□□□ -1.38
CHMP7-209ENST00000521656 HOXB3P14651 431 aaPredicted RBP6.44□□□□□ -1.38
CHMP7-209ENST00000521656 CCDC82Q8N4S0 544 aa6.44□□□□□ -1.38
CHMP7-209ENST00000521656 MKRN3Q13064 507 aaKnown RBP6.43□□□□□ -1.38
CHMP7-209ENST00000521656 GSE1Q14687 1217 aa6.42□□□□□ -1.38
CHMP7-209ENST00000521656 PLA2G2EQ9NZK7 142 aa6.42□□□□□ -1.38
CHMP7-209ENST00000521656 VGFO15240 615 aaPredicted RBP6.41□□□□□ -1.38
CHMP7-209ENST00000521656 VARS2Q5ST30 1063 aaKnown RBP6.41□□□□□ -1.38
CHMP7-209ENST00000521656 TMCO4Q5TGY1 634 aa6.41□□□□□ -1.38
CHMP7-209ENST00000521656 ZNF710Q8N1W2 664 aa6.41□□□□□ -1.38
CHMP7-209ENST00000521656 RGS22Q8NE09 1264 aa6.41□□□□□ -1.38
CHMP7-209ENST00000521656 ARHGEF1Q92888 912 aaKnown RBP6.41□□□□□ -1.38
CHMP7-209ENST00000521656 TRAIPQ9BWF2 469 aa6.41□□□□□ -1.38
CHMP7-209ENST00000521656 TESPA1A2RU30 521 aaPredicted RBP6.4□□□□□ -1.38
CHMP7-209ENST00000521656 AEBP1Q8IUX7 1158 aa6.4□□□□□ -1.38
CHMP7-209ENST00000521656 KDM4CQ9H3R0 1056 aa6.4□□□□□ -1.38
CHMP7-209ENST00000521656 MTMR7Q9Y216 660 aa6.4□□□□□ -1.38
CHMP7-209ENST00000521656 SEMA3EO15041 775 aa6.39□□□□□ -1.39
CHMP7-209ENST00000521656 RBM25P49756 843 aaKnown RBP6.39□□□□□ -1.39
CHMP7-209ENST00000521656 FLIIQ13045 1269 aa6.39□□□□□ -1.39
CHMP7-209ENST00000521656 BARGINQ6ZT62 677 aa6.39□□□□□ -1.39
CHMP7-209ENST00000521656 ZNF687Q8N1G0 1237 aa6.39□□□□□ -1.39
CHMP7-209ENST00000521656 AK7Q96M32 723 aa6.39□□□□□ -1.39
CHMP7-209ENST00000521656 STK24Q9Y6E0 443 aa6.39□□□□□ -1.39
CHMP7-209ENST00000521656 DCAF8Q5TAQ9 597 aa6.38□□□□□ -1.39
CHMP7-209ENST00000521656 CADPS2Q86UW7 1296 aa6.38□□□□□ -1.39
CHMP7-209ENST00000521656 FAM212AQ96EL1 285 aa6.37□□□□□ -1.39
CHMP7-209ENST00000521656 DOK7Q18PE1 504 aa6.36□□□□□ -1.39
CHMP7-209ENST00000521656 SMYD5Q6GMV2 418 aa6.36□□□□□ -1.39
CHMP7-209ENST00000521656 PUS7Q96PZ0 661 aaKnown RBP6.36□□□□□ -1.39
CHMP7-209ENST00000521656 BCL11BQ9C0K0 894 aaPredicted RBP6.36□□□□□ -1.39
CHMP7-209ENST00000521656 CHRM1P11229 460 aaPredicted RBP6.35□□□□□ -1.39
CHMP7-209ENST00000521656 MFAP1P55081 439 aaKnown RBP6.35□□□□□ -1.39
CHMP7-209ENST00000521656 FOXD4L5Q5VV16 416 aaPredicted RBP6.35□□□□□ -1.39
CHMP7-209ENST00000521656 FOXD4L4Q8WXT5 416 aaPredicted RBP6.35□□□□□ -1.39
CHMP7-209ENST00000521656 TRAK2O60296 914 aa6.33□□□□□ -1.4
CHMP7-209ENST00000521656 PYGBP11216 843 aa6.33□□□□□ -1.4
CHMP7-209ENST00000521656 KRI1Q8N9T8 703 aaKnown RBP6.33□□□□□ -1.4
CHMP7-209ENST00000521656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHMP7-209ENST00000521656 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.32□□□□□ -1.4
CHMP7-209ENST00000521656 A6NJR5 290 aa6.32□□□□□ -1.4
CHMP7-209ENST00000521656 ANKRD13DQ6ZTN6 518 aa6.32□□□□□ -1.4
CHMP7-209ENST00000521656 ZNF428Q96B54 188 aa6.32□□□□□ -1.4
CHMP7-209ENST00000521656 ZFP91Q96JP5 570 aaPredicted RBP6.32□□□□□ -1.4
CHMP7-209ENST00000521656 GZF1Q9H116 711 aaPredicted RBP6.32□□□□□ -1.4
CHMP7-209ENST00000521656 PCDHB8Q9UN66 801 aa6.32□□□□□ -1.4
CHMP7-209ENST00000521656 ZNF316A6NFI3 1004 aaPredicted RBP6.31□□□□□ -1.4
CHMP7-209ENST00000521656 E9PSI1 815 aa6.31□□□□□ -1.4
CHMP7-209ENST00000521656 RIMBP2O15034 1052 aa6.31□□□□□ -1.4
CHMP7-209ENST00000521656 GOLGA2Q08379 1002 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms